SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    601 2b8r:A
    (2.6Å)
    		 23 N/A URS000080DD3F N/A synthetic
    construct
    32630    		 11702070 Assembly1
    rna:B:1~23 10~16
    602 2b8r:B
    (2.6Å)
    		 23 N/A URS000080DD3F N/A synthetic
    construct
    32630    		 11702070 Assembly1
    rna:A:1~23 10~16
    603 2b8s:A
    (2.76Å)
    		 23 N/A URS000080E21C N/A synthetic
    construct
    32630    		 11702070 Assembly1
    rna:B:1~23 10~16
    604 2b8s:B
    (2.76Å)
    		 23 N/A URS000080E21C N/A synthetic
    construct
    32630    		 11702070 Assembly1
    rna:A:1~23 10~16
    605 2bbv:N
    (2.8Å)
    		 10 N/A URS000080E1B1 N/A synthetic
    construct
    32630    		 8289282 Assembly1
    rna:N-6:1~10 3~8
    606 2bcy:A
    (2.7Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31 3~6
    607 2bcy:B
    (2.7Å)
    		 12 N/A URS000080DDAC N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31 11~13
    608 2bcy:C
    (2.7Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31 15~24,26~31
    609 2bcy:D
    (2.7Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36,38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    610 2bcz:A
    (2.4Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 3~6
    611 2bcz:B
    (2.4Å)
    		 12 N/A URS000080E1BF N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~9,11~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    612 2bcz:C
    (2.4Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    613 2bcz:D
    (2.4Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36,38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    614 2be0:A
    (2.63Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 15593140 Assembly1
    rna:B:22~42 1~14,17~21
    615 2be0:B
    (2.63Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 15593140 Assembly1
    rna:A:1~21 22~35,38~42
    616 2bee:A
    (2.6Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 15593140 Assembly1
    rna:B:22~42 1~14,17~21
    617 2bee:B
    (2.6Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 15593140 Assembly1
    rna:A:1~21 22~35,38~42
    618 2bj2:A

    		 21 N/A URS000080DDBD N/A synthetic
    construct
    32630    		 9739090 Assembly1
    rna:B:1~19 7~15
    619 2bj2:B

    		 19 N/A URS000080E325 N/A synthetic
    construct
    32630    		 9739090 Assembly1
    rna:A:1~21 6~14
    620 2bny:S
    (3.0Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    rna:S-6:4~16 4~9,12~16
    621 2bq5:S
    (2.91Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    rna:S-6:2~18 2~9,12~18
    622 2bs1:S
    (2.8Å)
    		 11 N/A URS000080DDA5 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    rna:S-6:6~16 6~7,13~16
    623 2bu1:S
    (2.2Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:2~18 2~9,12~18
    624 2c4q:S
    (2.38Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:2~18 2~9,12~18
    625 2c4y:S
    (2.68Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:4~16 4~9,12~16
    626 2c4z:S
    (2.6Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:4~16 4~9,12~16
    627 2c50:S
    (2.65Å)
    		 13 N/A URS000080E1EC N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:4~16 4~9,12~16
    628 2c51:S
    (2.8Å)
    		 13 N/A URS000080E255 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    rna:S-6:4~16 4~9,12~16
    629 2d17:A

    		 16 N/A URS000080DF82 N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:B:1~14 1~16
    630 2d17:B

    		 14 N/A URS000080E0B5 N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:A:1~16 1~14
    631 2d18:A

    		 17 N/A URS000080E35C N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:B:1~17 1~17
    632 2d18:B

    		 17 N/A URS000080E35C N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:A:1~17 1~17
    633 2d19:A

    		 17 N/A URS000080E35C N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:B:1~17 5~13
    634 2d19:B

    		 17 N/A URS000080E35C N/A synthetic
    construct
    32630    		 16272570 Assembly1
    rna:A:1~17 5~13
    635 2d1a:A

    		 39 GO:0019074 (P) viral RNA genome packaging URS000080DE22 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16272570 Assembly1
    rna:B:1~39 1~39
    636 2d1a:B

    		 39 GO:0019074 (P) viral RNA genome packaging URS000080DE22 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16272570 Assembly1
    rna:A:1~39 1~39
    637 2d1b:A

    		 39 GO:0019074 (P) viral RNA genome packaging URS000080DE22 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16272570 Assembly1
    rna:B:1~39 15~23
    638 2d1b:B

    		 39 GO:0019074 (P) viral RNA genome packaging URS000080DE22 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16272570 Assembly1
    rna:A:1~39 15~23
    639 2d2k:A
    (2.65Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 3~6
    640 2d2k:B
    (2.65Å)
    		 12 N/A URS000080DF3F N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 2~9,11~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    641 2d2k:C
    (2.65Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    642 2d2k:D
    (2.65Å)
    		 19 N/A URS000080E37A N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 36~38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    643 2d2l:A
    (2.5Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 3~4,6
    644 2d2l:B
    (2.5Å)
    		 12 N/A URS000080DF3F N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 2~9,11~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    645 2d2l:C
    (2.5Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    646 2d2l:D
    (2.5Å)
    		 19 N/A URS00023358FF N/A synthetic
    construct
    32630    		 16262240
    12499551    		 Assembly1
    rna:A:1~13 36,38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    647 2dd1:A

    		 10 N/A URS000080DE92 N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:B:11~20 1~10
    648 2dd1:B

    		 10 N/A URS000080DF31 N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:A:1~10 11~20
    649 2dd2:A

    		 10 N/A URS000080E023 N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:B:11~20 1~10
    650 2dd2:B

    		 10 N/A URS000080E10B N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:A:1~10 11~20
    651 2dd3:A

    		 10 N/A URS000080E023 N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:B:11~20 1~10
    652 2dd3:B

    		 10 N/A URS000080E10B N/A synthetic
    construct
    32630    		 16734425 Assembly1
    rna:A:1~10 11~20
    653 2e5l:A
    (3.3Å)
    		 1517 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E378 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 17355865 Assembly1
    rna:1:1~6 1538~1543
    rna:2:7~10 723,1533,1537~1538
    654 2esi:A
    (3.0Å)
    		 23 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 0,2~15,18~22
    655 2esi:B
    (3.0Å)
    		 21 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:0~22 25~38,40~45
    656 2esj:A
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    657 2esj:B
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    658 2et3:A
    (2.8Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    659 2et3:B
    (2.8Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    660 2et4:A
    (2.4Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    661 2et4:B
    (2.4Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    662 2et5:A
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    663 2et5:B
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    664 2et8:A
    (2.5Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25 2~4,6~15,17~22
    665 2et8:B
    (2.5Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41,43~45
    666 2ez6:C
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    rna:D:1~28 1,27~28
    667 2ez6:D
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    rna:C:1~28 1,27~28
    668 2f4s:A
    (2.8Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1403 1403~1405,1407~1412,1488~1491,
    1494~1498
    669 2f4s:B
    (2.8Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494,1496~
    1498
    670 2f4t:A
    (3.0Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1401 1403~1412,1488~1491,1494~1498
    671 2f4t:B
    (3.0Å)
    		 23 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494~1498
    672 2f4u:A
    (2.6Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1403 1403~1405,1407~1412,1488~1491,
    1494~1498
    673 2f4u:B
    (2.6Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494,1496~
    1498
    674 2f4v:A
    (3.8Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E34A RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 16492561 Assembly1
    rna:Z:3~6 926,1400~1401,1498,1506
    675 2f4x:A

    		 24 N/A URS000080E05B N/A synthetic
    construct
    32630    		 16410614 Assembly1
    rna:B:25~48 9~17
    676 2f4x:B

    		 24 N/A URS000080E05B N/A synthetic
    construct
    32630    		 16410614 Assembly1
    rna:A:1~24 33~41
    677 2f8s:C
    (3.0Å)
    		 22 N/A URS000080DE2C N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:D:1~22 2~20
    678 2f8s:D
    (3.0Å)
    		 22 N/A URS000080DE2C N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:C:1~22 1~20
    679 2f8t:C
    (3.1Å)
    		 26 N/A URS000080DF6A N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:D:1~24 2~25
    680 2f8t:D
    (3.1Å)
    		 24 N/A URS000080DF6A N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:C:1~26 1~24
    681 2fcx:A
    (2.0Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    682 2fcx:B
    (2.0Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    683 2fcy:A
    (2.2Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    684 2fcy:B
    (2.2Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    685 2fcz:A
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    686 2fcz:B
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    687 2fcz:C
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly2
    rna:D:1~23 10~16
    688 2fcz:D
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly2
    rna:C:1~23 10~16
    689 2fd0:A
    (1.8Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    690 2fd0:B
    (1.8Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    691 2fgp:A
    (2.4Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 4~6
    692 2fgp:B
    (2.4Å)
    		 12 N/A URS000080DF3F N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    693 2fgp:C
    (2.4Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    694 2fgp:D
    (2.4Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36,38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    695 2fqn:A
    (2.3Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16452297 Assembly1
    rna:B:26~46 3~15,17~23
    696 2fqn:B
    (2.3Å)
    		 21 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16452297 Assembly1
    rna:A:2~23 26~39,42~46
    697 2g5k:A
    (2.8Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16596680 Assembly1
    rna:B:25~46 3~15,17~23
    698 2g5k:B
    (2.8Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16596680 Assembly1
    rna:A:2~23 26~38,40~46
    699 2g92:A
    (1.61Å)
    		 12 N/A URS000080E206 N/A synthetic
    construct
    32630    		 17163665 Assembly1
    rna:B:13~24 1~12
    700 2g92:B
    (1.61Å)
    		 12 N/A URS000080E206 N/A synthetic
    construct
    32630    		 17163665 Assembly1
    rna:A:1~12 13~24
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.