SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    7101 6osi:XV
    (4.14Å)
    		 68 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 19,56,70~71,76
    7102 6osi:XX
    (4.14Å)
    		 19 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XA:5~1542 5~15,17~18
    7103 6osi:YA
    (4.14Å)
    		 2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED94F RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XA:5~1542 1702~1703,1837,1846,1848,1912~
    1913,1915~1916,1919~1920,1948,
    1959~1961,2863
    rna:XV:1~76 1851,1892~1893,2111~2112,2394~
    2395,2421~2422,2432
    rna:YB:1~119 861~864,917~918,958
    7104 6osi:YB
    (4.14Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 78~80,89B,97~100
    7105 6osk:1
    (3.6Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:2:1~1534 1689,1700~1704,1837,1846~1848,
    1912~1913,1916,1919~1920,1947~
    1948,1959~1961
    rna:3:1~120 861~863,915~918,958~959,2339~2
    340
    rna:5:1~76 2064,2251~2253,2450~2451,2602
    7106 6osk:2
    (3.6Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    6,1517
    rna:4:13~21 530,693,926,1400~1402,1492,149
    8
    rna:5:1~76 790,966,1229,1338~1340,1400
    7107 6osk:3
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 41,78~80,89,96~97,99~100
    7108 6osk:5
    (3.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~32,34,38,40~42
    rna:4:13~21 34~37
    7109 6osq:1
    (3.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:2:1~1534 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1949,1959~1961
    rna:3:1~120 861~864,915,917~919,958,2339~2
    340
    rna:5:1~76 1907~1908,1922~1924,2063~2064,
    2251~2253,2255,2439,2450~2451,
    2585,2602
    7110 6osq:2
    (3.5Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 702,784,899~900,1407~1409,1418
    ~1419,1428~1429,1473~1475,1483
    ~1484,1493~1496,1517
    rna:4:13~21 530,693,789,926,1400~1402,1492
    ~1493,1498
    rna:5:1~76 790,966,1229,1338~1340,1400
    7111 6osq:3
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    7112 6osq:5
    (3.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 11~12,24~25,74~76
    rna:2:1~1534 29~32,34,38,40~41
    rna:4:13~21 34~37
    7113 6ost:1
    (4.2Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:2:1~1534 1686~1687,1689,1701~1703,1837,
    1846~1848,1895,1912~1913,1916,
    1919~1920,1947~1949,1959~1961
    rna:3:1~120 861~864,915~919,958
    rna:5:1~76 2251~2253,2450~2451,2602
    7114 6ost:2
    (4.2Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 702,784,1407~1409,1418~1419,14
    28~1429,1474~1475,1483~1485,14
    93~1495,1517
    rna:4:13~21 530,693,926,1400~1401,1403,149
    2,1498
    rna:5:1~76 790,966,1338~1340,1400
    7115 6ost:3
    (4.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 78~81,89~90,96~97,99~100
    7116 6ost:5
    (4.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 31,34,38~39,41
    rna:4:13~21 34~37
    7117 6ot3:1
    (3.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:2:1~1534 1689,1700,1702~1704,1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1949,1959~1961
    rna:3:1~120 861~863,915~918,958,2340
    rna:5:1~76 2251~2253,2450~2451,2602
    7118 6ot3:2
    (3.9Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 702,784,1407~1408,1418,1429,14
    75,1483~1484,1493~1495,1517
    rna:4:13~21 530,693,926,1401,1403,1492~149
    3,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    7119 6ot3:3
    (3.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 41,78~80,89~90,96~97,99~100
    7120 6ot3:5
    (3.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~31,34,38,40~41
    rna:4:13~21 34~37
    7121 6otr:QA
    (3.12Å)
    		 1510 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QV:1~76 790,966,1229,1338~1340,1400
    rna:QW:1~76 693~694,1340,1382~1383
    rna:QX:3~19 926,1400~1402,1498,1503,1505,1
    507,1532,1534~1535,1537
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1491~1492,1494~1496,1517
    7122 6otr:QV
    (3.12Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~19 34~37
    rna:RA:6~2897 11~12,24~25,74~76
    7123 6otr:QW
    (3.12Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 34,36~38
    rna:RA:6~2897 3~4,17A,19,56,70~71,76
    7124 6otr:QX
    (3.12Å)
    		 17 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 8~13,16~18
    rna:QV:1~76 16~19
    7125 6otr:RA
    (3.12Å)
    		 2891 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QA:3~1541 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:QV:1~76 1907~1909,1922~1924,2064,2251~
    2253,2450~2451,2601~2602
    rna:QW:1~76 1850~1851,1893,2112,2169,2180,
    2394~2395,2421~2422,2432
    rna:RB:1M~119 861~864,915,917~919,958
    rna:ZA:1~3 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    7126 6otr:RB
    (3.12Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:RA:6~2897 78~81,89A,96~97,99~100
    7127 6otr:XA
    (3.12Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:XW:1~76 693~694
    rna:XX:3~19 926,1400~1401,1403,1498,1505,1
    507,1532~1534,1536
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1491~1492,1494~1496,1517
    7128 6otr:XV
    (3.12Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 29~32,34,38~41
    rna:XX:3~19 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    7129 6otr:XW
    (3.12Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 37~38
    rna:YA:6~2897 56,70~71,76
    7130 6otr:XX
    (3.12Å)
    		 17 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 8~13,16~18
    rna:XV:1~76 16~18
    7131 6otr:YA
    (3.12Å)
    		 2878 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XA:3~1541 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2864
    rna:XV:1~76 1907~1909,1922~1923,2064,2251~
    2253,2439,2450~2451,2601~2602
    rna:XW:1~76 1851,1893,2169,2394~2395,2421~
    2422,2432
    rna:YB:1M~119 861~864,915,917~919,958
    rna:ZB:1~3 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    7132 6otr:YB
    (3.12Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    7133 6ouo:1
    (3.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:2:1~1534 1689,1700,1702~1704,1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1949,1959~1961
    rna:3:1~120 861~863,915~918,958,2340
    rna:5:1~76 2251~2253,2450~2451,2602
    7134 6ouo:2
    (3.7Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 702,784,1407~1408,1418,1429,14
    75,1483~1484,1493~1495,1517
    rna:4:13~21 530,693,926,1401,1403,1492~149
    3,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    7135 6ouo:3
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 41,78~80,89~90,96~97,99~100
    7136 6ouo:5
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~31,34,38,40~41
    rna:4:13~21 34~37
    7137 6owl:A
    (2.0Å)
    		 14 N/A N/A N/A synthetic
    construct
    32630    		 31913615 Assembly1
    rna:A-2:1~14 3~14
    rna:B-2:1 1~3
    rna:C-2:1 1~2
    7138 6oxa:QA
    (3.25Å)
    		 1510 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:3~22 788,926,1054,1400~1403,1492~14
    93,1498,1503,1505,1507,1532,15
    34~1537,1539,1541
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1491,1494~1496,1517
    7139 6oxa:QV
    (3.25Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~22 34~37
    rna:RA:6~2897 3,11~12,24~25,74~76
    7140 6oxa:QW
    (3.25Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly1
    rna:RA:6~2897 4,17A,19~20,56,70~71,76
    7141 6oxa:QX
    (3.25Å)
    		 20 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 3~4,7~14,16~18,20~22
    rna:QV:1~76 16~18
    7142 6oxa:RA
    (3.25Å)
    		 2891 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QA:3~1541 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:QV:1~76 1907~1909,1922~1924,2063,2251~
    2253,2255,2450~2451,2601~2602
    rna:QW:1~76 1851,1893,2112,2169,2180,2394~
    2395,2421~2422,2432
    rna:RB:1~119 861~864,915,917~919,958
    7143 6oxa:RB
    (3.25Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:RA:6~2897 78~81,89A,96~97,99~100
    7144 6oxa:XA
    (3.25Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:XX:3~22 926,1400~1401,1493,1498,1503,1
    505,1507,1532,1534~1536,1538~1
    539,1541
    rna:YA:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1443,1473~1475,1483~
    1484,1491,1494~1496,1517
    7145 6oxa:XV
    (3.25Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 29~32,34,38,40~41
    rna:XX:3~22 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    7146 6oxa:XW
    (3.25Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly2
    rna:YA:6~2897 56,71,76
    7147 6oxa:XX
    (3.25Å)
    		 20 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 3~4,7~14,16~18,20
    rna:XV:1~76 16~19
    7148 6oxa:YA
    (3.25Å)
    		 2875 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XA:3~1541 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961,2863~2864
    rna:XV:1~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:XW:1~76 1851,2169,2394~2395,2421~2422,
    2432
    rna:YB:1~119 861~864,915,917~919,958
    7149 6oxa:YB
    (3.25Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    7150 6oxi:QA
    (3.495Å)
    		 1510 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QV:1~76 790,966,1229,1338~1340,1400
    rna:QX:3~20 693,926,1400,1493,1498,1503,15
    05~1506,1532,1534~1537,1539~15
    41
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1491~1492,1494~1496,1517
    7151 6oxi:QV
    (3.495Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~20 34~37
    rna:RA:6~2897 11~12,24~25,74~76
    7152 6oxi:QX
    (3.495Å)
    		 18 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly1
    rna:QA:3~1541 5~18,20
    rna:QV:1~76 16~18
    7153 6oxi:RA
    (3.495Å)
    		 2891 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:QA:3~1541 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:QV:1~76 1907~1909,1922~1924,2063,2251~
    2253,2450~2451,2601~2602
    rna:RB:1~119 861~864,915,917~919,958
    rna:ZA:1~3 2451~2452,2506~2507,2553~2555,
    2573,2583~2585,2602
    7154 6oxi:RB
    (3.495Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly1
    rna:RA:6~2897 78~81,89A,96~97,99~101
    7155 6oxi:XA
    (3.495Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:XX:3~20 926,1400~1401,1403,1493,1498,1
    505,1532,1534~1536,1538~1541
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1492,1494~1496,1517
    7156 6oxi:XV
    (3.495Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 29~32,34,38~41
    rna:XX:3~20 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    7157 6oxi:XX
    (3.495Å)
    		 18 N/A N/A N/A Escherichia
    coli
    562    		 31501867 Assembly2
    rna:XA:3~1541 4,6~11,13,15~18,20
    rna:XV:1~76 16~18
    7158 6oxi:YA
    (3.495Å)
    		 2878 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:XA:3~1541 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1949,1959~
    1961,2863~2864
    rna:XV:1~76 1907~1909,1922~1924,2063,2251~
    2253,2450~2451,2601~2602
    rna:YB:1~119 861~864,915,917~919,958
    rna:ZB:1~3 2061,2451~2452,2506~2507,2553~
    2555,2583~2585,2602
    7159 6oxi:YB
    (3.495Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E212 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31501867 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    7160 6ozj:C
    (2.247Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7161 6ozj:D
    (2.247Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 11~23
    7162 6ozk:C
    (2.104Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7163 6ozk:D
    (2.104Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 12~23
    7164 6ozl:C
    (2.1Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:8~23 12~23
    7165 6ozl:D
    (2.1Å)
    		 16 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 12~23
    7166 6ozm:C
    (2.15Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7167 6ozm:D
    (2.15Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 12~23
    7168 6ozn:C
    (1.9Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7169 6ozn:D
    (1.9Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 12~23
    7170 6ozo:C
    (2.235Å)
    		 23 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:3~23 12~23
    7171 6ozo:D
    (2.235Å)
    		 21 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:1~23 12~23
    7172 6ozp:C
    (1.96Å)
    		 12 N/A URS000197CF4F N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:12~23 12~23
    7173 6ozp:D
    (1.96Å)
    		 12 N/A URS000197CF4F N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:12~23 12~23
    7174 6ozq:C
    (2.153Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7175 6ozq:D
    (2.153Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 12~23
    7176 6ozr:C
    (2.15Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:9~23 12~23
    7177 6ozr:D
    (2.15Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:9~23 11~23
    7178 6ozs:C
    (2.41Å)
    		 12 N/A URS000197CF4F N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:D:318~329 318~329
    7179 6ozs:D
    (2.41Å)
    		 12 N/A URS000197CF4F N/A synthetic
    construct
    32630    		 31444105 Assembly1
    rna:C:318~329 318~329
    7180 6p4g:1
    (3.1Å)
    		 203 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6618
    7181 6p4g:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6618 1058,1331,1489,1824~1825
    7182 6p4h:1
    (3.2Å)
    		 203 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6618
    7183 6p4h:2
    (3.2Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6618 1058,1331,1824~1825
    7184 6p5i:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6619
    rna:5:1~5069 6469~6470,6552~6553,6566~6567
    7185 6p5i:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6620 1058,1331,1489,1698,1824~1825,
    1829
    rna:5:1~5069 677~678,970,1028~1029,1051~105
    2,1180,1708~1710,1719~1721,173
    1,1815~1816,1826~1828,1849
    7186 6p5i:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:2:1~1869 1563~1564,2884~2885,3629,3695,
    3699~3700,3712,3759~3760,3762~
    3764,3766~3767,3794~3796,3806~
    3808
    rna:1:6416~6620 3757,3760,4046
    rna:7:1~119 1736~1738,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~22,58,146,193,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2332~23
    33,2355,2444~2445,2493,2508~25
    09,2542~2544,2778~2780,3890
    7187 6p5i:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~101,103~104
    7188 6p5i:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,68,103,
    108,110~113,115,124,126~128,13
    6,138~149,151~156
    7189 6p5j:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6620
    rna:5:1~5069 6470~6471,6552~6553,6566~6567,
    6581
    7190 6p5j:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6620 1058,1331,1488~1489,1698,1824~
    1825
    rna:5:1~5069 970,1030,1051~1052,1180,1708~1
    711,1719~1721,1731~1732,1815~1
    817,1826~1828,1849
    7191 6p5j:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:2:1~1869 1564,2884~2885,3628~3629,3695,
    3699~3700,3711,3759~3763,3766~
    3767,3794~3797,3806~3808
    rna:1:6416~6620 3757,3760,4046~4047
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2,4~22,58,146~147,193,338~339,
    341~348,350~353,355~357,360,36
    2,379~380,415~430,1304~1305,13
    33~1334,1371,2308~2310,2312~23
    13,2332~2334,2355,2444~2445,24
    72,2486,2542~2544,2778~2779,38
    91
    7192 6p5j:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~104
    7193 6p5j:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~13,15~22,24~37,40~41,53~54,6
    9,103,108,110,112~113,115,126~
    128,138~149,151~156
    7194 6p5k:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:5:1~5069 6470~6471,6552~6553,6566~6567,
    6581~6583
    rna:2:1~1869 6563~6566,6609,6615~6620
    7195 6p5k:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 677,970,1029~1030,1708~1711,17
    19~1721,1731,1815~1817,1826~18
    28,1849
    rna:1:6416~6620 1058,1331,1488~1489,1698,1824~
    1825
    7196 6p5k:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~8,10~22,58,146~147,193,338~3
    39,341~348,350~353,356~357,360
    ,362,379~380,415~430,1305,1333
    ~1334,1371,2308~2309,2312~2313
    ,2332~2334,2355,2444~2445,2472
    ,2508~2509,2542,2544,2778~2780
    ,3890
    rna:2:1~1869 1563~1565,2884~2885,3629,3711,
    3759~3763,3766~3767,3794~3796,
    3806~3808
    rna:1:6416~6620 1759~1760,1774,3757~3758,3760,
    4046
    7197 6p5k:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~104
    7198 6p5k:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,68,103,
    108,110~113,115,124,126,128,13
    5,138~149,151~155
    7199 6p5n:1
    (3.2Å)
    		 207 N/A URS000197CF61 N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:5:1~5069 6468~6470,6582
    rna:2:1~1869 6560,6563,6568,6571,6611~6612,
    6615~6617,6619,6621~6622
    7200 6p5n:2
    (3.2Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 677~678,970,1028~1030,1052,118
    0,1708~1710,1719~1721,1731,181
    5~1816,1825~1828,1849
    rna:1:6416~6622 626,961,1058,1207,1248,1639~16
    40,1698,1701~1702,1704,1825,18
    30
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.