SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    7201 6p4h:2
    (3.2Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6618 1058,1331,1824~1825
    7202 6p5i:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6619
    rna:5:1~5069 6469~6470,6552~6553,6566~6567
    7203 6p5i:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6620 1058,1331,1489,1698,1824~1825,
    1829
    rna:5:1~5069 677~678,970,1028~1029,1051~105
    2,1180,1708~1710,1719~1721,173
    1,1815~1816,1826~1828,1849
    7204 6p5i:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02543 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:2:1~1869 1563~1564,2884~2885,3629,3695,
    3699~3700,3712,3759~3760,3762~
    3764,3766~3767,3794~3796,3806~
    3808
    rna:1:6416~6620 3757,3760,4046
    rna:7:1~119 1736~1738,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~22,58,146,193,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2332~23
    33,2355,2444~2445,2493,2508~25
    09,2542~2544,2778~2780,3890
    7205 6p5i:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~101,103~104
    7206 6p5i:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,68,103,
    108,110~113,115,124,126~128,13
    6,138~149,151~156
    7207 6p5j:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:2:1~1869 6563,6565~6566,6609,6615~6620
    rna:5:1~5069 6470~6471,6552~6553,6566~6567,
    6581
    7208 6p5j:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:1:6416~6620 1058,1331,1488~1489,1698,1824~
    1825
    rna:5:1~5069 970,1030,1051~1052,1180,1708~1
    711,1719~1721,1731~1732,1815~1
    817,1826~1828,1849
    7209 6p5j:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02543 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:2:1~1869 1564,2884~2885,3628~3629,3695,
    3699~3700,3711,3759~3763,3766~
    3767,3794~3797,3806~3808
    rna:1:6416~6620 3757,3760,4046~4047
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2,4~22,58,146~147,193,338~339,
    341~348,350~353,355~357,360,36
    2,379~380,415~430,1304~1305,13
    33~1334,1371,2308~2310,2312~23
    13,2332~2334,2355,2444~2445,24
    72,2486,2542~2544,2778~2779,38
    91
    7210 6p5j:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~104
    7211 6p5j:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~13,15~22,24~37,40~41,53~54,6
    9,103,108,110,112~113,115,126~
    128,138~149,151~156
    7212 6p5k:1
    (3.1Å)
    		 205 N/A URS000197CF5E N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:5:1~5069 6470~6471,6552~6553,6566~6567,
    6581~6583
    rna:2:1~1869 6563~6566,6609,6615~6620
    7213 6p5k:2
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 677,970,1029~1030,1708~1711,17
    19~1721,1731,1815~1817,1826~18
    28,1849
    rna:1:6416~6620 1058,1331,1488~1489,1698,1824~
    1825
    7214 6p5k:5
    (3.1Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02543 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~8,10~22,58,146~147,193,338~3
    39,341~348,350~353,356~357,360
    ,362,379~380,415~430,1305,1333
    ~1334,1371,2308~2309,2312~2313
    ,2332~2334,2355,2444~2445,2472
    ,2508~2509,2542,2544,2778~2780
    ,3890
    rna:2:1~1869 1563~1565,2884~2885,3629,3711,
    3759~3763,3766~3767,3794~3796,
    3806~3808
    rna:1:6416~6620 1759~1760,1774,3757~3758,3760,
    4046
    7215 6p5k:7
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~104
    7216 6p5k:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,68,103,
    108,110~113,115,124,126,128,13
    5,138~149,151~155
    7217 6p5n:1
    (3.2Å)
    		 207 N/A URS000197CF61 N/A Israeli
    acute
    paralysis
    virus
    294365    		 31609474 Assembly1
    rna:5:1~5069 6468~6470,6582
    rna:2:1~1869 6560,6563,6568,6571,6611~6612,
    6615~6617,6619,6621~6622
    7218 6p5n:2
    (3.2Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 677~678,970,1028~1030,1052,118
    0,1708~1710,1719~1721,1731,181
    5~1816,1825~1828,1849
    rna:1:6416~6622 626,961,1058,1207,1248,1639~16
    40,1698,1701~1702,1704,1825,18
    30
    7219 6p5n:5
    (3.2Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02543 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1334,1371,2308~2
    309,2312~2313,2333~2334,2355,2
    444,2472,2486,2508~2509,2542~2
    544,2778~2779,3890
    rna:2:1~1869 1563~1565,2884~2885,3628~3629,
    3695,3700,3711,3759~3760,3763,
    3766~3767,3794~3796,3806~3808
    rna:1:6416~6622 3958~3959,4045,4255
    7220 6p5n:7
    (3.2Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~103
    7221 6p5n:8
    (3.2Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,103,108
    ~110,112~113,115,126~128,138~1
    49,151~156
    7222 6pc5:I
    (2.7Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7223 6pc5:J
    (2.7Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7224 6pc6:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~919,958
    7225 6pc6:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~81,89~90,97,99~100
    7226 6pc7:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2340
    7227 6pc7:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7228 6pc8:I
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2340
    7229 6pc8:J
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7230 6pch:I
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7231 6pch:J
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7232 6pcq:I
    (2.6Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7233 6pcq:J
    (2.6Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~101
    7234 6pcr:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2339
    7235 6pcr:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7236 6pcs:I
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~864,915,917~918,958
    7237 6pcs:J
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7238 6pct:I
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~919,958,2340
    7239 6pct:J
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~81,89~90,97,99~100
    7240 6pj6:I
    (2.2Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 31989172 Assembly1
    rna:J:2~119 861~863,915,917~919,958,2339
    7241 6pj6:J
    (2.2Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 31989172 Assembly1
    rna:I:1~2904 41,78~81,89~90,96~97,99~101
    7242 6pmo:A
    (2.65703Å)
    		 60 N/A URS000197CF52 N/A Geobacillus
    kaustophilus
    1462    		 31740854 Assembly1
    rna:B:1~76 130~131,159~163,165,185~186
    7243 6pmo:B
    (2.65703Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005115FB RF00005 Geobacillus
    kaustophilus
    1462    		 31740854 Assembly1
    rna:A:128~191 1,73~76
    7244 6pom:A
    (4.9Å)
    		 155 GO:0000049 (F) tRNA binding URS000197CF54 RF00230 Bacillus
    subtilis
    1423    		 31740854 Assembly1
    rna:B:1~75 30,56,68,75,99~102,124~125,154
    ~158,177~178
    7245 6pom:B
    (4.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005115FB RF00005 Bacillus
    subtilis
    1423    		 31740854 Assembly1
    rna:A:13~182 1,18~19,32~36,55,72~75
    7246 6ppf:A
    (3.4Å)
    		 2471 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF51 RF02541 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:B:3~114 909,962,965
    7247 6ppf:B
    (3.4Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:A:3~2925 76,79,97~98
    7248 6ppk:A
    (4.4Å)
    		 2658 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF51 RF02541 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:B:3~114 908~910,962~966,997
    7249 6ppk:B
    (4.4Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:A:3~2925 76~79,88,95,97~98
    7250 6q8u:A
    (1.99Å)
    		 21 N/A URS0000EEACF7 N/A Haloarcula
    marismortui
    2238    		 31234702 Assembly1
    rna:B:1~21 1~6,8~21
    7251 6q8u:B
    (1.99Å)
    		 21 N/A URS0000EEACF7 N/A Haloarcula
    marismortui
    2238    		 31234702 Assembly1
    rna:A:1~21 1~6,8~21
    7252 6q8y:2
    (3.1Å)
    		 1767 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B78 RF01960 Saccharomyces
    cerevisiae
    4932    		 30911188
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:l:32~48 904,1150,1637~1638,1640,1761
    rna:n:1~76 1001,1191,1462~1463,1575~1577,
    1637
    rna:m:1~75 1577,1620
    rna:BQ:3~3396 628~629,913,971~973,994~995,11
    23,1644~1646,1655~1657,1667,17
    46~1747,1757~1759,1780
    7253 6q8y:BQ
    (3.1Å)
    		 3161 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 30911188
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125,2191,21
    95,2207~2208,2255,2258~2259,22
    62~2263,2290~2292,2302~2303
    rna:n:1~76 2252,2266,2619~2621,2819~2820,
    2971
    rna:m:1~75 2210~2211,2235~2236,2764~2765,
    2793~2794
    rna:BR:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:BS:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,158
    4,1618,1620,1830~1831,2386,258
    5,2994~2995
    7254 6q8y:BR
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:BQ:3~3396 79~82,86,90,100,102~103
    7255 6q8y:BS
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 30911188
    441    		 Assembly1
    rna:BQ:3~3396 1~2,4~22,24~33,35~37,40~41,53~
    54,104,106,109,114~115,125~126
    ,129,136~157
    7256 6q8y:l
    (3.1Å)
    		 17 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 43,45~48
    rna:n:1~76 46~48
    7257 6q8y:m
    (3.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60BA3 RF00005 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 34~36
    rna:l:32~48 36~37
    rna:BQ:3~3396 3~4,69~70,74~75
    7258 6q8y:n
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60BDA RF00005 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 30~32,34,38,40~41
    rna:l:32~48 34~37
    rna:m:1~75 39~40
    rna:BQ:3~3396 11~12,74~76
    7259 6q95:1
    (3.7Å)
    		 2831 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E0F3 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:2:5~1531 1701,1703~1704,1831,1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:7:1~76 1908~1909,1922~1923,2064,2251~
    2253,2439,2450~2451,2585,2601~
    2602
    rna:8:1~76 1851,2112,2168,2180~2181,2394~
    2395,2421~2422,2432
    rna:3:1~119 861~864,915,917~919,958
    rna:4:1~349 896,1066,2470,2482~2483,2507,2
    553~2555,2573,2583~2584,2602
    7260 6q95:2
    (3.7Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:7:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:9:13~18 693,926,1400,1498,1505
    rna:1:6~2897 702,784,791,899,1407~1409,1418
    ,1429,1442A,1474,1483~1484,149
    2~1496,1517
    7261 6q95:3
    (3.7Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:1:6~2897 78~81,90,97~101
    7262 6q95:4
    (3.7Å)
    		 319 GO:0006401 (P) RNA catabolic process URS000046D244 RF00023 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:1:6~2897 23,324,328~329,337,347~349
    7263 6q95:7
    (3.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:5~1531 29~32,34,38,40~41
    rna:8:1~76 39~40
    rna:9:13~18 34~37
    rna:1:6~2897 11~12,24~25,74~76
    7264 6q95:8
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60B80 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:6~2897 17,19,56,71,76
    7265 6q97:1
    (3.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02541 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1686,1689,1700~1703,1831,1836~
    1837,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1960
    rna:3:1~120 861~864,915~919
    rna:8:1~77 379~380,386~388,1851,2110,2112
    ,2168,2180~2181
    rna:4:1~363 881~883,896~897,2602~2603
    rna:7:1~77 1922,1924,2063~2064,2252~2256,
    2437~2439,2594~2595,2600~2601
    7266 6q97:2
    (3.9Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492,1494~1495,1517
    rna:8:1~77 693,1340
    rna:9:1~9 693,926,1400~1401,1498
    rna:7:1~77 790,966,1229~1230,1339~1340,14
    00
    7267 6q97:3
    (3.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 78~81,97,99~100
    7268 6q97:4
    (3.9Å)
    		 334 GO:0006401 (P) RNA catabolic process URS00006A1445 RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 14~15,343,362
    rna:7:1~77 358,360~363
    7269 6q97:7
    (3.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052A6C3 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 1~3,11~13,26,72~77
    rna:2:1~1534 30~32,35,39~40
    rna:9:1~9 35~38
    rna:4:1~363 1,69,74~76
    7270 6q97:8
    (3.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 18~20,57~58,71~72,76~77
    rna:2:1~1534 36~37
    rna:9:1~9 36~37
    7271 6q98:1
    (4.3Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1701,1703,1832,1837,1848,1912~
    1913,1919~1920,1948~1949,1959~
    1960
    rna:3:1~120 861~863,915,917~918,958
    rna:4:1~363 886,888,892,2063~2064,2251~225
    3,2255,2307,2439,2451,2602
    7272 6q98:2
    (4.3Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B97 RF00177 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,784,899,1408,1418~1419,142
    9,1474,1483~1484,1492,1494~149
    5,1517
    rna:4:1~363 955,1054,1196,1397,1492~1493
    7273 6q98:3
    (4.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 78~80,89,96,99~100
    7274 6q98:4
    (4.3Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 3,25,59~61,361~363
    rna:2:1~1534 84,90~91,93~94
    7275 6q9a:1
    (3.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02541 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1700~1703,1831,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1922,1947~1949,1959~1960
    rna:3:1~120 861~863,915,918~919,958~959,23
    39
    rna:7:1~76 1907~1909,1923~1924,2063,2251~
    2253,2450~2451,2585
    7276 6q9a:2
    (3.7Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,784,791,899,1407~1409,1418
    ,1428~1429,1474,1483~1484,1492
    ,1494~1496,1517
    rna:7:1~76 790,966,1229,1338~1340,1400
    rna:4:1~363 421,788,926,1196,1397,1400,140
    2,1493,1498,1505
    7277 6q9a:3
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    7278 6q9a:4
    (3.7Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 87,89~93,95~96,103
    rna:7:1~76 90~92
    7279 6q9a:7
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005F0912 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 10~12,24,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:4:1~363 34~37
    7280 6qcs:R
    (3.1Å)
    		 15 N/A URS0000EEAD16 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:V:1~14 4,6~9
    7281 6qcs:V
    (3.1Å)
    		 14 N/A URS000080E200 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:R:4~18 11~14
    7282 6qct:M
    (3.2Å)
    		 13 N/A URS0000EEAD28 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:R:8~20 12~20
    7283 6qct:R
    (3.2Å)
    		 13 N/A URS0000EEAD16 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:M:2~20 11~19
    7284 6qcv:M
    (3.24Å)
    		 15 N/A URS0000EEAD0F N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6~8,11~14
    7285 6qcv:R
    (3.24Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~14 17~21
    rna:V:1~14 4,6~10
    7286 6qcv:V
    (3.24Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7287 6qcw:M
    (2.88Å)
    		 15 N/A URS0000EEAD0F N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6,8,11~14
    7288 6qcw:R
    (2.88Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~14 17~21
    rna:V:1~14 4,6~10
    7289 6qcw:V
    (2.88Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7290 6qcx:M
    (3.08Å)
    		 16 N/A URS0000EEAD1E N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6,8,11~15
    7291 6qcx:R
    (3.08Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~15 16~21
    rna:V:1~14 4,6~10
    7292 6qcx:V
    (3.08Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7293 6qdv:2
    (3.3Å)
    		 120 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0000E60B75 RF00004 Homo
    sapiens
    9606    		 30705154
    M068_0.6

    504

    M055_0.6

    97    		 Assembly1
    rna:6:1~97 1~11,16~17,19~22,25~28
    rna:I:1~167 31~33,35~46
    7294 6qdv:5
    (3.3Å)
    		 75 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000118C49 RF00020 Homo
    sapiens
    9606    		 30705154
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:6:1~97 42~44
    rna:E:-12~2 40,42~44
    7295 6qdv:6
    (3.3Å)
    		 97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 30705154
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    rna:2:1~184 47,49~56,80,82~83,87~97
    rna:5:9~97 66~67,69~70
    rna:E:-12~2 53~54,71
    rna:I:1~167 29~45,52,73
    7296 6qdv:E
    (3.3Å)
    		 14 N/A URS0002335924 N/A Human
    adenovirus
    2
    10515    		 30705154 Assembly1
    rna:5:9~97 -5~-3,-1,1
    rna:6:1~97 -2~-1,1~2
    rna:I:1~167 1~2
    7297 6qdv:I
    (3.3Å)
    		 42 N/A N/A N/A Human
    adenovirus
    2
    10515    		 30705154 Assembly1
    rna:2:1~184 132~142,146~148
    rna:6:1~97 1~11,13~17,167
    7298 6qdw:a
    (2.83Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:b:1~2905 41,78~81,88~89,96~97,99~100
    7299 6qdw:b
    (2.83Å)
    		 2888 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000051AF4 RF02541 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:a:2~119 863~866,917,919~921,960,2343~2
    344
    rna:v:1~75 2068,2255~2257,2454~2455,2606
    7300 6qdw:v
    (2.83Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004CF48A RF00005 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:b:1~2905 73~75
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.