SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    7201 6p5n:5
    (3.2Å)
    		 3594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF83 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 2~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1334,1371,2308~2
    309,2312~2313,2333~2334,2355,2
    444,2472,2486,2508~2509,2542~2
    544,2778~2779,3890
    rna:2:1~1869 1563~1565,2884~2885,3628~3629,
    3695,3700,3711,3759~3760,3763,
    3766~3767,3794~3796,3806~3808
    rna:1:6416~6622 3958~3959,4045,4255
    7202 6p5n:7
    (3.2Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000064027A RF00001 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~103
    7203 6p5n:8
    (3.2Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 31609474 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,103,108
    ~110,112~113,115,126~128,138~1
    49,151~156
    7204 6pc5:I
    (2.7Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7205 6pc5:J
    (2.7Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7206 6pc6:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~919,958
    7207 6pc6:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~81,89~90,97,99~100
    7208 6pc7:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2340
    7209 6pc7:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7210 6pc8:I
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2340
    7211 6pc8:J
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7212 6pch:I
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7213 6pch:J
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7214 6pcq:I
    (2.6Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958
    7215 6pcq:J
    (2.6Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~101
    7216 6pcr:I
    (2.5Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~918,958,2339
    7217 6pcr:J
    (2.5Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~80,89~90,97,99~100
    7218 6pcs:I
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~864,915,917~918,958
    7219 6pcs:J
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 78~80,89~90,97,99~100
    7220 6pct:I
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:J:2~119 861~863,915,917~919,958,2340
    7221 6pct:J
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32968273 Assembly1
    rna:I:1~2904 41,78~81,89~90,97,99~100
    7222 6pj6:I
    (2.2Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 31989172 Assembly1
    rna:J:2~119 861~863,915,917~919,958,2339
    7223 6pj6:J
    (2.2Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 31989172 Assembly1
    rna:I:1~2904 41,78~81,89~90,96~97,99~101
    7224 6pmo:A
    (2.65703Å)
    		 60 N/A URS000197CF52 N/A Geobacillus
    kaustophilus
    1462    		 31740854 Assembly1
    rna:B:1~76 130~131,159~163,165,185~186
    7225 6pmo:B
    (2.65703Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005115FB RF00005 Geobacillus
    kaustophilus
    1462    		 31740854 Assembly1
    rna:A:128~191 1,73~76
    7226 6pom:A
    (4.9Å)
    		 155 GO:0000049 (F) tRNA binding URS000197CF54 RF00230 Bacillus
    subtilis
    1423    		 31740854 Assembly1
    rna:B:1~75 30,56,68,75,99~102,124~125,154
    ~158,177~178
    7227 6pom:B
    (4.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005115FB RF00005 Bacillus
    subtilis
    1423    		 31740854 Assembly1
    rna:A:13~182 1,18~19,32~36,55,72~75
    7228 6ppf:A
    (3.4Å)
    		 2471 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF51 RF02540
    RF02541
    RF00002    		 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:B:3~114 909,962,965
    7229 6ppf:B
    (3.4Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:A:3~2925 76,79,97~98
    7230 6ppk:A
    (4.4Å)
    		 2658 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF51 RF02540
    RF02541
    RF00002    		 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:B:3~114 908~910,962~966,997
    7231 6ppk:B
    (4.4Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    1423    		 31665744 Assembly1
    rna:A:3~2925 76~79,88,95,97~98
    7232 6q8u:A
    (1.99Å)
    		 21 N/A URS0000EEACF7 N/A Haloarcula
    marismortui
    2238    		 31234702 Assembly1
    rna:B:1~21 1~6,8~21
    7233 6q8u:B
    (1.99Å)
    		 21 N/A URS0000EEACF7 N/A Haloarcula
    marismortui
    2238    		 31234702 Assembly1
    rna:A:1~21 1~6,8~21
    7234 6q8y:2
    (3.1Å)
    		 1767 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B78 RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 30911188
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:l:32~48 904,1150,1637~1638,1640,1761
    rna:n:1~76 1001,1191,1462~1463,1575~1577,
    1637
    rna:m:1~75 1577,1620
    rna:BQ:3~3396 628~629,913,971~973,994~995,11
    23,1644~1646,1655~1657,1667,17
    46~1747,1757~1759,1780
    7235 6q8y:BQ
    (3.1Å)
    		 3161 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 30911188
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125,2191,21
    95,2207~2208,2255,2258~2259,22
    62~2263,2290~2292,2302~2303
    rna:n:1~76 2252,2266,2619~2621,2819~2820,
    2971
    rna:m:1~75 2210~2211,2235~2236,2764~2765,
    2793~2794
    rna:BR:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:BS:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,158
    4,1618,1620,1830~1831,2386,258
    5,2994~2995
    7236 6q8y:BR
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:BQ:3~3396 79~82,86,90,100,102~103
    7237 6q8y:BS
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 30911188
    441    		 Assembly1
    rna:BQ:3~3396 1~2,4~22,24~33,35~37,40~41,53~
    54,104,106,109,114~115,125~126
    ,129,136~157
    7238 6q8y:l
    (3.1Å)
    		 17 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 43,45~48
    rna:n:1~76 46~48
    7239 6q8y:m
    (3.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60BA3 RF00005 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 34~36
    rna:l:32~48 36~37
    rna:BQ:3~3396 3~4,69~70,74~75
    7240 6q8y:n
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60BDA RF00005 Saccharomyces
    cerevisiae
    4932    		 30911188 Assembly1
    rna:2:1~1798 30~32,34,38,40~41
    rna:l:32~48 34~37
    rna:m:1~75 39~40
    rna:BQ:3~3396 11~12,74~76
    7241 6q95:1
    (3.7Å)
    		 2831 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E0F3 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:2:5~1531 1701,1703~1704,1831,1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:7:1~76 1908~1909,1922~1923,2064,2251~
    2253,2439,2450~2451,2585,2601~
    2602
    rna:8:1~76 1851,2112,2168,2180~2181,2394~
    2395,2421~2422,2432
    rna:3:1~119 861~864,915,917~919,958
    rna:4:1~349 896,1066,2470,2482~2483,2507,2
    553~2555,2573,2583~2584,2602
    7242 6q95:2
    (3.7Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:7:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:9:13~18 693,926,1400,1498,1505
    rna:1:6~2897 702,784,791,899,1407~1409,1418
    ,1429,1442A,1474,1483~1484,149
    2~1496,1517
    7243 6q95:3
    (3.7Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:1:6~2897 78~81,90,97~101
    7244 6q95:4
    (3.7Å)
    		 319 GO:0006401 (P) RNA catabolic process URS000046D244 RF00023 Thermus
    thermophilus
    HB8
    300852    		 30765567 Assembly1
    rna:1:6~2897 23,324,328~329,337,347~349
    7245 6q95:7
    (3.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:5~1531 29~32,34,38,40~41
    rna:8:1~76 39~40
    rna:9:13~18 34~37
    rna:1:6~2897 11~12,24~25,74~76
    7246 6q95:8
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60B80 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:6~2897 17,19,56,71,76
    7247 6q97:1
    (3.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1686,1689,1700~1703,1831,1836~
    1837,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1960
    rna:3:1~120 861~864,915~919
    rna:8:1~77 379~380,386~388,1851,2110,2112
    ,2168,2180~2181
    rna:4:1~363 881~883,896~897,2602~2603
    rna:7:1~77 1922,1924,2063~2064,2252~2256,
    2437~2439,2594~2595,2600~2601
    7248 6q97:2
    (3.9Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492,1494~1495,1517
    rna:8:1~77 693,1340
    rna:9:1~9 693,926,1400~1401,1498
    rna:7:1~77 790,966,1229~1230,1339~1340,14
    00
    7249 6q97:3
    (3.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 78~81,97,99~100
    7250 6q97:4
    (3.9Å)
    		 334 GO:0006401 (P) RNA catabolic process URS00006A1445 RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 14~15,343,362
    rna:7:1~77 358,360~363
    7251 6q97:7
    (3.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052A6C3 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 1~3,11~13,26,72~77
    rna:2:1~1534 30~32,35,39~40
    rna:9:1~9 35~38
    rna:4:1~363 1,69,74~76
    7252 6q97:8
    (3.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 18~20,57~58,71~72,76~77
    rna:2:1~1534 36~37
    rna:9:1~9 36~37
    7253 6q98:1
    (4.3Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02540
    RF02541    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1701,1703,1832,1837,1848,1912~
    1913,1919~1920,1948~1949,1959~
    1960
    rna:3:1~120 861~863,915,917~918,958
    rna:4:1~363 886,888,892,2063~2064,2251~225
    3,2255,2307,2439,2451,2602
    7254 6q98:2
    (4.3Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B97 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,784,899,1408,1418~1419,142
    9,1474,1483~1484,1492,1494~149
    5,1517
    rna:4:1~363 955,1054,1196,1397,1492~1493
    7255 6q98:3
    (4.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 78~80,89,96,99~100
    7256 6q98:4
    (4.3Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 3,25,59~61,361~363
    rna:2:1~1534 84,90~91,93~94
    7257 6q9a:1
    (3.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02540
    RF02541    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 1700~1703,1831,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1922,1947~1949,1959~1960
    rna:3:1~120 861~863,915,918~919,958~959,23
    39
    rna:7:1~76 1907~1909,1923~1924,2063,2251~
    2253,2450~2451,2585
    7258 6q9a:2
    (3.7Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 702,784,791,899,1407~1409,1418
    ,1428~1429,1474,1483~1484,1492
    ,1494~1496,1517
    rna:7:1~76 790,966,1229,1338~1340,1400
    rna:4:1~363 421,788,926,1196,1397,1400,140
    2,1493,1498,1505
    7259 6q9a:3
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    7260 6q9a:4
    (3.7Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:2:1~1534 87,89~93,95~96,103
    rna:7:1~76 90~92
    7261 6q9a:7
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005F0912 RF00005 Escherichia
    coli
    562    		 30765567 Assembly1
    rna:1:1~2903 10~12,24,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:4:1~363 34~37
    7262 6qcs:R
    (3.1Å)
    		 15 N/A URS0000EEAD16 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:V:1~14 4,6~9
    7263 6qcs:V
    (3.1Å)
    		 14 N/A URS000080E200 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:R:4~18 11~14
    7264 6qct:M
    (3.2Å)
    		 13 N/A URS0000EEAD28 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:R:8~20 12~20
    7265 6qct:R
    (3.2Å)
    		 13 N/A URS0000EEAD16 N/A Influenza
    B
    virus
    11520    		 31160782 Assembly1
    rna:M:2~20 11~19
    7266 6qcv:M
    (3.24Å)
    		 15 N/A URS0000EEAD0F N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6~8,11~14
    7267 6qcv:R
    (3.24Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~14 17~21
    rna:V:1~14 4,6~10
    7268 6qcv:V
    (3.24Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7269 6qcw:M
    (2.88Å)
    		 15 N/A URS0000EEAD0F N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6,8,11~14
    7270 6qcw:R
    (2.88Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~14 17~21
    rna:V:1~14 4,6~10
    7271 6qcw:V
    (2.88Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7272 6qcx:M
    (3.08Å)
    		 16 N/A URS0000EEAD1E N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 6,8,11~15
    7273 6qcx:R
    (3.08Å)
    		 21 N/A URS0000EEAD16 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:M:0~15 16~21
    rna:V:1~14 4,6~10
    7274 6qcx:V
    (3.08Å)
    		 14 N/A URS000080E200 N/A synthetic
    construct
    32630    		 31160782 Assembly1
    rna:R:1~21 11~14
    7275 6qdv:2
    (3.3Å)
    		 120 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0000E60B75 RF00004 Homo
    sapiens
    9606    		 30705154
    M068_0.6

    504

    M055_0.6

    97    		 Assembly1
    rna:6:1~97 1~11,16~17,19~22,25~28
    rna:I:1~167 31~33,35~46
    7276 6qdv:5
    (3.3Å)
    		 75 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000118C49 RF00020 Homo
    sapiens
    9606    		 30705154
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:6:1~97 42~44
    rna:E:-12~2 40,42~44
    7277 6qdv:6
    (3.3Å)
    		 97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 30705154
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    rna:2:1~184 47,49~56,80,82~83,87~97
    rna:5:9~97 66~67,69~70
    rna:E:-12~2 53~54,71
    rna:I:1~167 29~45,52,73
    7278 6qdv:E
    (3.3Å)
    		 14 N/A N/A N/A Human
    adenovirus
    2
    10515    		 30705154 Assembly1
    rna:5:9~97 -5~-3,-1,1
    rna:6:1~97 -2~-1,1~2
    rna:I:1~167 1~2
    7279 6qdv:I
    (3.3Å)
    		 42 N/A N/A N/A Human
    adenovirus
    2
    10515    		 30705154 Assembly1
    rna:2:1~184 132~142,146~148
    rna:6:1~97 1~11,13~17,167
    7280 6qdw:a
    (2.83Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:b:1~2905 41,78~81,88~89,96~97,99~100
    7281 6qdw:b
    (2.83Å)
    		 2888 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000051AF4 RF02540
    RF02541    		 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:a:2~119 863~866,917,919~921,960,2343~2
    344
    rna:v:1~75 2068,2255~2257,2454~2455,2606
    7282 6qdw:v
    (2.83Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004CF48A RF00005 Escherichia
    coli
    BL21(DE3)
    469008    		 33149120 Assembly1
    rna:b:1~2905 73~75
    7283 6qik:A
    (3.1Å)
    		 3146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 31115337
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:x:1~121 996~998,1052,1054~1055,1156,11
    71,1196~1197
    rna:y:1~156 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    657,691,1394~1395,1399,1419,14
    41,1530,1558,1584,1618,1830~18
    31,2386,2585,2994~2995
    7284 6qik:x
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 31115337 Assembly1
    rna:A:3~3396 79~81,86,90,100,102~103
    7285 6qik:y
    (3.1Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 31115337
    441    		 Assembly1
    rna:A:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,114~115,126,129,136,138
    ~152,154~156
    7286 6qn3:A
    (2.3Å)
    		 50 GO:0070406 (F) glutamine binding URS0000EEACFE RF01704 Prochlorococcus
    sp.
    1220    		 31216023 Assembly1
    rna:B:1~50 1~6,17~20,22,33~42,44~45
    7287 6qn3:B
    (2.3Å)
    		 50 GO:0070406 (F) glutamine binding URS0000EEACFE RF01704 Prochlorococcus
    sp.
    1220    		 31216023 Assembly1
    rna:A:1~50 1~6,18~20,22,33~42,44~45
    7288 6qnq:13
    (3.5Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly1
    rna:1K:5~69 530,1053~1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1341,14
    00
    rna:4K:9~25 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1507,1532~1533,1
    535~1536
    rna:1H:6~2898 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    3~1496,1517
    7289 6qnq:14
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly2
    rna:1G:3~1540 1689,1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1913,1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:2L:1~77 1907~1908,1923~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~77 1851,1885,2112,2169,2181,2394~
    2395,2421~2422
    rna:1J:1M~119 861~864,915~919,958
    7290 6qnq:16
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly1
    rna:1H:6~2898 78~81,89A,96~97,99~100
    7291 6qnq:1G
    (3.5Å)
    		 1510 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly2
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4L:5~25 926,928,1196,1397,1400~1402,14
    93,1498,1503,1506,1532,1534,15
    36~1540
    rna:14:4~2899 702,783~784,899~900,1407~1409,
    1418,1429,1443,1474~1475,1483~
    1485,1492~1496,1517
    7292 6qnq:1H
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly1
    rna:13:4~1536 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1K:5~69 881~882,897,1913,2482~2483
    rna:2K:1~77 1909,1922~1924,2251~2253,2255,
    2450~2451,2601~2602
    rna:3K:1~77 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:16:1~119 861~864,915,917~919,958
    7293 6qnq:1J
    (3.5Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 31175275 Assembly2
    rna:14:4~2899 78~81,89A,96~97,99~101
    7294 6qnq:1K
    (3.5Å)
    		 65 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 31175275 Assembly1
    rna:13:4~1536 35~38
    rna:4K:9~25 36~38
    rna:1H:6~2898 20,38,56~57,65
    7295 6qnq:2K
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 31175275 Assembly1
    rna:13:4~1536 31~33,35,39,41~42
    rna:4K:9~25 35~38
    rna:1H:6~2898 2~3,11~13,25~26,75~77
    7296 6qnq:2L
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 31175275 Assembly2
    rna:1G:3~1540 31~33,35,39,41~43
    rna:4L:5~25 35~38
    rna:14:4~2899 2~3,12~13,25,75~77
    7297 6qnq:3K
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 31175275 Assembly1
    rna:4K:9~25 35~36
    rna:1H:6~2898 20,57,72~73,77
    7298 6qnq:3L
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 31175275 Assembly2
    rna:14:4~2899 3,18,20,57~58,73,77
    7299 6qnq:4K
    (3.5Å)
    		 17 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 31175275 Assembly1
    rna:13:4~1536 9~10,12~13,15~20,22~23
    rna:1K:5~69 19~21
    rna:2K:1~77 16~18
    7300 6qnq:4L
    (3.5Å)
    		 21 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 31175275 Assembly2
    rna:1G:3~1540 5~13,15~19,21~23
    rna:2L:1~77 16~18
    << < 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.