SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    8701 7bl2:B
    (3.7Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:A:-6~2912 78~80,89~90,97,99~100
    8702 7bl3:A
    (3.5Å)
    		 2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119D2 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:B:1~119 861~863,915,917~918,958~959
    8703 7bl3:B
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:A:-6~2912 78~80,89~90,97,99~100
    8704 7bl4:A
    (2.4Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:B:1~119 861~863,915,917~918,958
    8705 7bl4:B
    (2.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:A:1~2903 78~81,89,97,99~100
    8706 7bl5:A
    (3.3Å)
    		 2913 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119D2 RF02540
    RF02541    		 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 33639093 Assembly1
    rna:B:1~119 861~863,915,917~918,958~959
    8707 7bl5:B
    (3.3Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 33639093 Assembly1
    rna:A:-6~2912 78~80,89~90,97,99~100
    8708 7bl6:A
    (4.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:B:1~119 861~863,915,917~919,958
    8709 7bl6:B
    (4.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    K-12
    83333    		 33639093 Assembly1
    rna:A:1~2903 78~81,89,97,99~100
    8710 7bt6:1
    (3.12Å)
    		 2962 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:2:1~158 1,5~8,11~13,15~23,59,330~337,3
    39~342,345~346,349,351,368~369
    ,404~419,691,1394~1395,1399,14
    19,1441,2386,2994~2995
    8711 7bt6:2
    (3.12Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:1:1~3396 1,4~22,24~33,35~37,40,53,104,1
    38~144,146~150,152~155,157
    8712 7bt6:3
    (3.12Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:1:1~3396 82~83,99
    8713 7btb:1
    (3.22Å)
    		 3058 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~40
    9,411~419,656,691,1394,1399,14
    19~1420,1441,1558,1620,1830~18
    32,2386,2994~2995
    rna:6:1~232 1,3,1570
    8714 7btb:2
    (3.22Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:1:1~3396 1,3~13,15~22,24~33,35~37,40~41
    ,53~54,104,113~115,128,137~150
    ,152~157
    8715 7btb:6
    (3.22Å)
    		 65 N/A URS000013305B N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 33037216 Assembly1
    rna:1:1~3396 229,232
    8716 7bv2:P
    (2.5Å)
    		 11 N/A URS0001A16A67 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 32358203 Assembly1
    rna:T:8~21 10~20
    8717 7bv2:T
    (2.5Å)
    		 14 N/A URS0001A16A6F N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 32358203 Assembly1
    rna:P:10~20 11~21
    8718 7bv8:A
    (3.14Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DE5 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 32571953 Assembly1
    rna:B:1~120 861~864,915,917~918
    8719 7bv8:B
    (3.14Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 32571953 Assembly1
    rna:A:1~2903 41,78~80,97,99~100
    8720 7bzf:F
    (3.26Å)
    		 10 N/A URS0001A24B66 N/A Foot-and-mouth
    disease
    virus
    12110    		 32526208 Assembly1
    rna:G:-4~4 -4~4
    8721 7c2k:F
    (2.93Å)
    		 20 N/A URS0001A24B73 N/A Foot-and-mouth
    disease
    virus
    12110    		 32526208 Assembly1
    rna:G:-6~5 -5~6
    8722 7c2k:G
    (2.93Å)
    		 12 N/A URS0001A24B74 N/A Foot-and-mouth
    disease
    virus
    12110    		 32526208 Assembly1
    rna:F:-21~6 -6~5
    8723 7c7a:A
    (2.8Å)
    		 330 EC:3.1.-.-
    GO:0000171 (F) ribonuclease MRP activity
    GO:0006364 (P) rRNA processing
    GO:0000172 (C) ribonuclease MRP complex    		 URS0001A24B54 RF00030 Saccharomyces
    cerevisiae
    S288C
    559292    		 32586950 Assembly1
    rna:R:-1~7 87~88,266,305~306
    8724 7cpj:9
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 34906996 Assembly1
    rna:a:2~1540 30~32,34,38,40~42
    rna:A:1~2903 12,24,74~76
    rna:x:16~18 34~37
    8725 7cpj:A
    (3.3Å)
    		 2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76322 RF02540
    RF02541    		 Escherichia
    coli
    562    		 34906996 Assembly1
    rna:a:2~1540 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1949,1959~1961
    rna:B:1~120 861~864,915,917~919,958,2340
    rna:9:1~76 1907~1908,1923,2063~2064,2251~
    2253,2450~2451,2602
    8726 7cpj:B
    (3.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008116C5 RF00001 Escherichia
    coli
    562    		 34906996 Assembly1
    rna:A:1~2903 41,78~81,89,96~97,99~100
    8727 7cpj:a
    (3.3Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34906996 Assembly1
    rna:A:1~2903 702,784,900,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    6,1517
    rna:9:1~76 790,966,1229,1338~1340,1400
    rna:x:16~18 926,1400~1402,1498
    8728 7cpu:L5
    (2.82Å)
    		 3539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119F6 RF02543
    RF02540    		 Mus
    musculus
    10090    		 36517592
    1320

    1325

    153

    M188_0.6

    113

    350

    1379

    513    		 Assembly1
    rna:L7:1~120 1539~1542,1544,1595~1599,1697,
    1712,1739,1745
    rna:L8:1~156 2~22,58,146~147,338,341~347,34
    9~352,355~356,359,361,378~379,
    414~429,1119~1120,1148~1149,11
    86,2065~2066,2069~2070,2089~20
    91,2112,2201,2229,2265~2266,23
    00~2302,2532~2534,3547
    rna:S2:1~1870 1377~1379,3286,3367,3416~3420,
    3423~3424,3451~3453,3463~3465
    rna:S6:2~76 3371~3372,3396~3397,3994~3995,
    4023~4024
    8729 7cpu:L7
    (2.82Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Mus
    musculus
    10090    		 36517592 Assembly1
    rna:L5:1~4717 77~80,84,88,98,100~103
    8730 7cpu:L8
    (2.82Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A4 RF00002 Mus
    musculus
    10090    		 36517592 Assembly1
    rna:L5:1~4717 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,123~127,136,138~1
    49,151~156
    8731 7cpu:S2
    (2.82Å)
    		 1656 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119C0 RF01960
    RF01959
    RF00177    		 Mus
    musculus
    10090    		 36517592
    576    		 Assembly1
    rna:L5:1~4717 678,971,1029~1031,1709~1711,17
    20~1722,1816~1817,1827~1829,18
    50
    rna:S6:2~76 1059,1249,1525~1526,1640~1642,
    1702
    8732 7cpu:S6
    (2.82Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Mus
    musculus
    10090    		 36517592
    576    		 Assembly1
    rna:L5:1~4717 71,75~76
    rna:S2:1~1870 29~32,34,38~42
    8733 7cpv:L5
    (3.03Å)
    		 3541 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119F6 RF02543
    RF02540    		 Mus
    musculus
    10090    		 36517592
    1320

    1325

    153

    M188_0.6

    113

    350

    1379

    513    		 Assembly1
    rna:L7:1~120 1539~1541,1544,1595,1597~1598,
    1697,1712,1739,1745
    rna:L8:1~156 2~22,58,146~147,338,340~347,34
    9~352,355~356,359,361,378~379,
    414~429,1119~1120,1148~1149,11
    86,2065~2066,2069~2070,2089~20
    90,2112,2201,2249,2300~2301,25
    32~2534
    rna:S2:1~1870 1377~1379,3286,3367,3416~3420,
    3423~3424,3451~3452,3463~3465
    rna:S6:2~76 3371~3372,3396~3397,3994~3995,
    4023~4024
    8734 7cpv:L7
    (3.03Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Mus
    musculus
    10090    		 36517592 Assembly1
    rna:L5:1~4717 77~79,84,88,98,100~101,103
    8735 7cpv:L8
    (3.03Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A4 RF00002 Mus
    musculus
    10090    		 36517592 Assembly1
    rna:L5:1~4717 4~22,24~37,40~41,53~54,103,108
    ,110~113,115,123~127,135~136,1
    38~149,151~156
    8736 7cpv:S2
    (3.03Å)
    		 1637 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119C0 RF01960
    RF01959
    RF00177    		 Mus
    musculus
    10090    		 36517592
    576    		 Assembly1
    rna:L5:1~4717 678,971,1029~1031,1709~1711,17
    20,1722,1816~1817,1826~1829,18
    50
    rna:S6:2~76 1059,1249,1525~1526,1640~1642,
    1702
    8737 7cpv:S6
    (3.03Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Mus
    musculus
    10090    		 36517592
    576    		 Assembly1
    rna:L5:1~4717 70~72,75~76
    rna:S2:1~1870 30~32,34,38~42
    8738 7ctt:Q
    (3.2Å)
    		 16 N/A URS00021ED9A2 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33521757 Assembly1
    rna:T:9~26 5~20
    8739 7ctt:T
    (3.2Å)
    		 18 N/A URS00021ED98B N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33521757 Assembly1
    rna:Q:5~20 11~26
    8740 7cxm:I
    (2.9Å)
    		 25 N/A URS00021ED98C N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33208736 Assembly1
    rna:J:100~125 12~22,24~35
    8741 7cxm:J
    (2.9Å)
    		 26 N/A URS00021ED8F4 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33208736 Assembly1
    rna:I:11~35 102~112,114,116~125
    8742 7cxn:I
    (3.84Å)
    		 25 N/A URS00021ED98C N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33208736 Assembly1
    rna:J:100~125 11~35
    8743 7cxn:J
    (3.84Å)
    		 26 N/A URS00021ED8F4 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33208736 Assembly1
    rna:I:11~35 102~125
    8744 7cyq:I
    (2.83Å)
    		 25 N/A URS00021ED9A9 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33232691 Assembly1
    rna:J:24~50 10~20,22~33
    8745 7cyq:J
    (2.83Å)
    		 27 N/A URS00021ED92C N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 33232691 Assembly1
    rna:I:9~33 27~50
    8746 7d1a:A
    (3.8Å)
    		 692 GO:0000373 (P) Group II intron splicing URS00021ED979 RF00029 Lactococcus
    cremoris
    1359    		 33021674 Assembly1
    rna:B:1~12 107,122,220~222,224~227,279~28
    0,282~284,2419
    8747 7d1a:B
    (3.8Å)
    		 12 N/A URS00021ED95B N/A Lactococcus
    cremoris
    1359    		 33021674 Assembly1
    rna:A:1~2492 1~4,8~12
    8748 7d4i:3A
    (4.0Å)
    		 216 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS000231196A RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:5A:2~591 39~53,71~73
    rna:SA:-7~1804 2~14,16~22,25,27~28
    8749 7d4i:5A
    (4.0Å)
    		 118 N/A URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:2~333 281~282,464~468,470~479
    8750 7d4i:SA
    (4.0Å)
    		 1337 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119EF RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:2~333 5,7,9~16,18,1112~1117,1119~112
    5
    8751 7d5s:3A
    (4.6Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:5A:2~591 39~55,62~73
    rna:SA:-7~1791 1~13,15~22,25~28
    8752 7d5s:5A
    (4.6Å)
    		 523 N/A URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 281~292,462~468,470~479
    8753 7d5s:SA
    (4.6Å)
    		 859 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED968 RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    8754 7d5t:3A
    (6.0Å)
    		 167 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:5A:464~545 39~53
    rna:SA:-7~1804 2~14,16~22,25,27~28
    8755 7d5t:5A
    (6.0Å)
    		 43 N/A URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:2~333 464~468,470~479
    8756 7d5t:SA
    (6.0Å)
    		 1189 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119EF RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:2~333 5,7,9~16,18,1112~1117,1119~112
    5
    8757 7d63:3A
    (12.3Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:5A:2~591 39~53,62~73
    rna:SA:-7~1804 1~13,15~22,25~28
    8758 7d63:5A
    (12.3Å)
    		 192 N/A URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 281~292,464~468,470~479
    8759 7d63:SA
    (12.3Å)
    		 1331 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A0A RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    8760 7d6z:2
    (3.4Å)
    		 65 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED932 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 19,56~57,70~72
    8761 7d6z:3
    (3.4Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 12~13,24,74~76
    rna:f:2~1540 30~32,38,40~41
    8762 7d6z:4
    (3.4Å)
    		 66 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000021B2C1 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 19,56,64,74,76
    8763 7d6z:A
    (3.4Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:2:1~73 1850~1851,1891,1893,2112~2113
    rna:3:1~76 1907~1908,1923,2251~2253,2450~
    2451,2602
    rna:4:1~76 896,2451,2482,2507,2553~2555,2
    583~2585,2602
    rna:B:2~119 861~864,915,917~919,958,2340
    rna:f:2~1540 1701,1703,1832,1836~1837,1846,
    1848,1912,1915~1916,1919~1920,
    1947~1949,1959~1961
    8764 7d6z:B
    (3.4Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 41,78~81,89,96~97,99~100
    8765 7d6z:f
    (3.4Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:3:1~76 790,1229,1338~1340
    rna:A:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1474,1483~1484,1494~149
    6,1517
    8766 7d80:A
    (4.1Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:B:2~1540 1701,1703,1836~1837,1846~1848,
    1912~1913,1915,1919~1920,1947~
    1948,1959~1960
    rna:X:1~73 1851~1852,2112~2113
    rna:Z:1~76 1913~1915,1942,1944,1955,2470~
    2471,2482~2483,2506~2508,2553~
    2555,2573,2582~2583
    rna:a:2~119 861~864,915,917~919,958
    rna:y:1~76 1908~1909,1922~1923,2251~2253,
    2255,2450~2451,2602
    8767 7d80:B
    (4.1Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 702,783~784,1407,1409,1418,142
    9,1474,1483~1484,1493~1496,151
    7
    rna:Z:1~76 518,530~531,1054,1493
    rna:y:1~76 790,1229,1338~1340,1400
    8768 7d80:X
    (4.1Å)
    		 65 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED932 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 19,56,71
    8769 7d80:Z
    (4.1Å)
    		 66 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000021B2C1 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 25~26,38,51~52,63,71,73~76
    rna:B:2~1540 33,35~36,38
    8770 7d80:a
    (4.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 78~81,89~90,97,99~100
    8771 7d80:y
    (4.1Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 33761323 Assembly1
    rna:A:1~2903 2,12,74~76
    rna:B:2~1540 30~31,35,38~41
    8772 7d8c:B
    (3.6Å)
    		 38 N/A URS00023119B5 N/A Lachnospiraceae
    bacterium
    ND2006
    1410628    		 34108490 Assembly1
    rna:C:1~3 25~28
    8773 7dco:B
    (2.5Å)
    		 179 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    4932    		 33243853 Assembly1
    rna:F:1~103 98~99
    rna:G:74~536 96~100
    8774 7dco:F
    (2.5Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    4932    		 33243853
    383    		 Assembly1
    rna:B:1~183 72~73,75
    rna:G:74~536 45~51,77,79
    rna:H:1~1169 53,55~62,85,88,92~103
    8775 7dco:G
    (2.5Å)
    		 105 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 33243853
    562

    132

    355

    168

    387

    487

    403    		 Assembly1
    rna:B:1~183 95,97~99
    rna:F:1~103 98~99,102~107
    rna:H:1~1169 488,490~500,502~504
    8776 7dco:H
    (2.5Å)
    		 169 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0000D77944 RF00004 Saccharomyces
    cerevisiae
    4932    		 33243853 Assembly1
    rna:F:1~103 2~14,17,20~23,26~30
    rna:G:74~536 32~46
    8777 7dfg:P
    (2.7Å)
    		 12 N/A URS00023119C8 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:T:7~22 9~20
    8778 7dfg:T
    (2.7Å)
    		 16 N/A URS0002311A02 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:P:9~20 11~22
    8779 7dfh:T
    (2.97Å)
    		 12 N/A URS0002311980 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:P:13~20 11~18
    8780 7dmq:B
    (3.06Å)
    		 53 N/A URS00021ED93F N/A Leptotrichia
    shahii
    157691    		 33472057 Assembly1
    rna:C:3~37 23~35,37~41,43~54,56~57
    8781 7dmq:C
    (3.06Å)
    		 35 N/A URS00021ED911 N/A Escherichia
    coli
    562    		 33472057 Assembly1
    rna:B:5~57 3~4,7~37
    8782 7doi:P
    (2.6Å)
    		 12 N/A URS00023119C8 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:T:8~22 9~20
    8783 7doi:T
    (2.6Å)
    		 15 N/A URS00023119C7 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:P:9~20 11~22
    8784 7dok:P
    (2.73Å)
    		 20 N/A URS0001A16A67 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:T:7~30 1~20
    8785 7dok:T
    (2.73Å)
    		 24 N/A URS0002311990 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:P:1~20 11~30
    8786 7dte:F
    (3.0Å)
    		 33 N/A URS00023119EE N/A Foot-and-mouth
    disease
    virus
    12110    		 34653416 Assembly1
    rna:G:-24~4 -4~24
    8787 7dte:G
    (3.0Å)
    		 29 N/A URS000231197E N/A Foot-and-mouth
    disease
    virus
    12110    		 34653416 Assembly1
    rna:F:-8~24 -24~-20,-18~4
    8788 7dug:A
    (3.75Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8789 7dug:W
    (3.75Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8790 7duh:A
    (3.75Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8791 7duh:W
    (3.75Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8792 7dui:A
    (3.62Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8793 7dui:W
    (3.62Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8794 7duj:A
    (3.75Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8795 7duj:W
    (3.75Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8796 7duk:A
    (3.6Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8797 7duk:W
    (3.6Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8798 7dul:A
    (3.62Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD5E RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 N/A Assembly1
    rna:Y:1~6 530,1196,1397,1492~1493,1544
    rna:W:28~42 530~531,1054,1493
    8799 7dul:W
    (3.62Å)
    		 15 N/A URS000080E1F5 N/A Thermus
    thermophilus
    274    		 N/A Assembly1
    rna:A:5~1544 34~37
    rna:Y:1~6 34~37
    8800 7dvq:B
    (2.89Å)
    		 90 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 33509932
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:F:2~65 42~44
    rna:G:-11~222 40~43
    << < 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.