SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    9201 7m4v:A
    (2.54Å)
    		 2732 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:B:1~115 859~861,913,915~917,948,955
    9202 7m4v:B
    (2.54Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:8~2899 76~79,85,87,94,96~97
    9203 7m4w:A
    (2.55Å)
    		 2730 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:B:1~115 859~861,913,915~917,948,955
    rna:a:3~1530 1842,1908~1909,1915,1955
    9204 7m4w:B
    (2.55Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 76~79,85,87,94,96~97
    9205 7m4w:a
    (2.55Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 699,1404~1406,1415
    9206 7m4x:A
    (2.66Å)
    		 2730 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:B:1~115 859~861,915~917,955
    rna:a:3~1530 1701,1844,1908~1909,1915~1916,
    1943~1944,1955~1956
    rna:v:1~77 2247~2248,2446~2447
    9207 7m4x:B
    (2.66Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 76~79,86~87,94,96~97
    9208 7m4x:a
    (2.66Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 699,1404~1405,1415,1426,1480~1
    481,1489,1491~1492,1514
    rna:v:1~77 963,1226~1227,1335~1337,1397
    rna:w:1~3 1398,1495
    9209 7m4x:v
    (2.66Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 75~77
    rna:a:3~1530 31~33,35,41~42
    rna:w:1~3 35~38
    9210 7m4y:A
    (2.5Å)
    		 2730 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:B:1~115 859~861,915~917,948,955
    rna:a:3~1530 1842,1909,1915~1916,1955~1956
    rna:v:1~77 1846~1847,1888~1889,2390~2391,
    2417~2418,2428
    9211 7m4y:B
    (2.5Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 76~79,85,87,94,96~97
    9212 7m4y:a
    (2.5Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 699,1405~1406,1415,1472,1480,1
    489,1491~1492,1514
    rna:v:1~77 963,1226~1227,1335~1337
    9213 7m4y:v
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 3~4,71~72,76~77
    rna:a:3~1530 30~32,35,41~42
    rna:w:1~3 35~38
    9214 7m4z:A
    (2.92Å)
    		 2730 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:B:1~115 859~861,915~917,948,955
    rna:a:3~1530 1701~1702,1842,1908~1909,1915~
    1916,1955~1956
    9215 7m4z:B
    (2.92Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 76~79,85,87,94,96~97
    9216 7m4z:a
    (2.92Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 34044590 Assembly1
    rna:A:9~2898 699,1405~1406,1426~1427,1480~1
    481,1489,1491~1492,1514
    9217 7m50:WW
    (2.31Å)
    		 10 N/A URS000080DF9E N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:V:163~169 165~169
    9218 7m50:e
    (2.31Å)
    		 12 N/A URS000080DF9E N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:P:163~169 183~187
    9219 7m57:7
    (4.0Å)
    		 22 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:mm:181~190 203,205
    rna:ss:181~190 211,213
    rna:tt:181~190 213~214
    9220 7m57:P
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:d:161~170 161~169
    rna:e:181~190 162,165~168
    rna:s:181~190 161~170
    9221 7m57:Q
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:f:181~190 165~170
    rna:7-2:195~216 168~169
    rna:RR-2:161~170 161~170
    rna:ii-2:181~190 161~170
    9222 7m57:QQ
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:gg:161~170 161~169
    rna:hh:181~190 162,165~168
    rna:vv:181~190 162~170
    9223 7m57:R
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:g:181~190 164~169
    rna:ff-2:161~170 161~169
    rna:uu-2:181~190 161~170
    9224 7m57:RR
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:ii:181~190 162~163,165~168
    rna:Q-2:161~170 161~170
    rna:f-2:181~190 161~170
    rna:u-2:195~196 168~169
    9225 7m57:S
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:h:181~190 164~169
    rna:YY:161~170 161~169
    rna:oo:181~190 161~170
    9226 7m57:SS
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:jj:181~190 162~170
    rna:c-2:161~170 161~169
    rna:r-2:181~190 161~170
    9227 7m57:T
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:U:161~170 161~169
    rna:i:181~190 162,165~167
    rna:j:181~190 161~170
    9228 7m57:TT
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:W:161~170 161~169
    rna:l:181~190 161~170
    rna:kk:181~190 162,165~168
    9229 7m57:U
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:T:161~170 161~170
    rna:i:181~190 161~170
    rna:j:181~190 161~170
    rna:x:195~196 168~169
    9230 7m57:UU
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 168~169
    rna:VV:161~170 161~169
    rna:ll:181~190 162,164~168
    rna:mm:181~190 161~170
    9231 7m57:V
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:k:181~190 162,166~167
    rna:7:195~216 168~169
    rna:WW:161~170 161~170
    rna:nn:181~190 161~170
    9232 7m57:VV
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:UU:161~170 161~170
    rna:ll:181~190 161~170
    rna:mm:181~190 161,165~170
    9233 7m57:W
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:l:181~190 161~170
    rna:TT:161~170 161~170
    rna:kk:181~190 161~170
    9234 7m57:WW
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:V:161~170 161~170
    rna:k:181~190 161~170
    rna:z:195~196 168~169
    rna:nn:181~190 166~169
    9235 7m57:X
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:m:181~190 162,165~168
    rna:b-2:161~170 161~169
    rna:q-2:181~190 161~170
    rna:6-2:195~196 168~169
    9236 7m57:Y
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:Z:161~170 161~170
    rna:n:181~190 165~169
    rna:o:181~190 161~170
    rna:4:195~196 168~169
    9237 7m57:YY
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:S:161~170 161~170
    rna:h:181~190 161~170
    rna:w:195~196 168~169
    rna:oo:181~190 161~170
    9238 7m57:Z
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:Y:161~170 161~169
    rna:n:181~190 161~170
    rna:o:181~190 162,165~167
    rna:3:195~196 168~169
    9239 7m57:ZZ
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:pp:181~190 162,164~167,169
    rna:ee-2:161~170 161~169
    rna:tt-2:181~190 161~170
    9240 7m57:a
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:p:181~190 163~165,168~169
    rna:a-2:161~170 161~169
    rna:p-2:181~190 161~170
    9241 7m57:b
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:q:181~190 162,165~167
    rna:X-2:161~170 161~169
    rna:m-2:181~190 161~170
    rna:2-2:195~196 168~169
    9242 7m57:bb
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 168~169
    rna:cc:161~170 161~170
    rna:qq:181~190 162,165~169
    rna:rr:181~190 161~170
    9243 7m57:c
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:r:181~190 162,165~169
    rna:SS-2:161~170 161~169
    rna:jj-2:181~190 161~170
    9244 7m57:cc
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:bb:161~170 161~170
    rna:qq:181~190 161~170
    rna:rr:181~190 162,165~168
    rna:zz:195~196 168~169
    9245 7m57:d
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:P:161~170 161~170
    rna:e:181~190 161~170
    rna:s:181~190 161,165~169
    rna:t:195~196 168~169
    9246 7m57:dd
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:ss:181~190 162,165,168~169
    rna:7-2:195~216 168~169
    rna:dd-2:161~170 161~170
    rna:ss-2:181~190 161~170
    9247 7m57:e
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:P:161~170 182~185
    rna:d:161~170 181~190
    rna:s:181~190 181~183
    rna:t:195~196 188~189
    9248 7m57:ee
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:tt:181~190 161~170
    rna:7-2:195~216 168~169
    rna:ZZ-2:161~170 161~169
    rna:pp-2:181~190 161~170
    9249 7m57:f
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:Q:161~170 181~186
    rna:RR-2:161~170 181~190
    rna:ii-2:181~190 182,184~185
    9250 7m57:ff
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:uu:181~190 161~162,166~170
    rna:R-2:161~170 161~170
    rna:g-2:181~190 161~170
    rna:v-2:195~196 168~169
    9251 7m57:g
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:R:161~170 181~187
    rna:ff-2:161~170 181~190
    rna:uu-2:181~190 182~183
    9252 7m57:gg
    (4.0Å)
    		 10 N/A URS0002311A1B N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:QQ:161~170 161~169
    rna:hh:181~190 161~170
    rna:vv:181~190 161,165~169
    rna:ww:195~196 168~169
    9253 7m57:h
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:S:161~170 181~186
    rna:w:195~196 188~189
    rna:YY:161~170 181~190
    rna:oo:181~190 181~184
    9254 7m57:hh
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:QQ:161~170 182~186
    rna:gg:161~170 181~190
    rna:vv:181~190 181~183
    rna:ww:195~196 188~189
    9255 7m57:i
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:T:161~170 182~186
    rna:U:161~170 181~190
    rna:j:181~190 181~184
    rna:x:195~196 188~189
    9256 7m57:ii
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:RR:161~170 181~184
    rna:Q-2:161~170 181~190
    rna:f-2:181~190 182~183,185
    9257 7m57:j
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:T:161~170 181~190
    rna:U:161~170 181~189
    rna:i:181~190 182~184
    rna:y:195~196 188~189
    9258 7m57:jj
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:SS:161~170 181~189
    rna:xx:195~196 188~189
    rna:c-2:161~170 181~190
    rna:r-2:181~190 182~184
    9259 7m57:k
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:V:161~170 182~184
    rna:WW:161~170 181~190
    rna:nn:181~190 182~184
    9260 7m57:kk
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:W:161~170 181~190
    rna:l:181~190 181~184
    rna:7:195~216 188~189
    rna:TT:161~170 182~185
    9261 7m57:l
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:W:161~170 181~189
    rna:1:195~196 188~190
    rna:TT:161~170 181~190
    rna:kk:181~190 182~185
    9262 7m57:ll
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 188~189
    rna:UU:161~170 182~186
    rna:VV:161~170 181~190
    rna:mm:181~190 181~183
    9263 7m57:m
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:X:161~170 182~185
    rna:2:195~196 188~189
    rna:b-2:161~170 182~190
    rna:q-2:181~190 181~184
    9264 7m57:mm
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 185,188~189
    rna:UU:161~170 181~190
    rna:VV:161~170 181~185,189
    rna:ll:181~190 181~183
    9265 7m57:n
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:Y:161~170 181~186
    rna:Z:161~170 181~190
    rna:o:181~190 181~184
    rna:3:195~196 188~189
    9266 7m57:nn
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:V:161~170 181~190
    rna:k:181~190 182~184
    rna:7:195~216 188~189
    rna:WW:161~170 182~184
    9267 7m57:o
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:Y:161~170 181~190
    rna:Z:161~170 182~185
    rna:n:181~190 181~183
    rna:4:195~196 188~189
    9268 7m57:oo
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:S:161~170 181~190
    rna:h:181~190 182~185
    rna:YY:161~170 181~189
    rna:yy:195~196 188~189
    9269 7m57:p
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:a:161~170 181~182,185,187~188
    rna:5:195~196 188~189
    rna:a-2:161~170 181~190
    rna:p-2:181~190 182~183
    9270 7m57:pp
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:ZZ:161~170 181~185
    rna:ee-2:161~170 181~190
    rna:tt-2:181~190 182,184
    9271 7m57:q
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:b:161~170 182~185
    rna:X-2:161~170 181~190
    rna:m-2:181~190 181~184
    9272 7m57:qq
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:bb:161~170 182~186
    rna:cc:161~170 181~190
    rna:rr:181~190 181~183
    rna:zz:195~196 188~189
    9273 7m57:r
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:c:161~170 181~185
    rna:7:195~216 188~189
    rna:SS-2:161~170 182~190
    rna:jj-2:181~190 182~184
    9274 7m57:rr
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 188~189
    rna:bb:161~170 181~190
    rna:cc:161~170 182~185
    rna:qq:181~190 181~184
    9275 7m57:s
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:P:161~170 181~190
    rna:d:161~170 181~185,189
    rna:e:181~190 181~183
    rna:8:195~196 188~189
    9276 7m57:ss
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 185,188~189
    rna:dd:161~170 181~182,185
    rna:dd-2:161~170 181~190
    rna:ss-2:181~190 181~183
    9277 7m57:tt
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 188~189
    rna:ee:161~170 181~190
    rna:ZZ-2:161~170 181~190
    rna:pp-2:181~190 182~185
    9278 7m57:uu
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:7:195~216 188~189
    rna:ff:161~170 181~184,189
    rna:R-2:161~170 182~190
    rna:g-2:181~190 182~183
    9279 7m57:vv
    (4.0Å)
    		 10 N/A URS0001C1D8A6 N/A Satellite
    tobacco
    mosaic
    virus
    12881    		 34866603 Assembly1
    rna:QQ:161~170 182~190
    rna:gg:161~170 181~185,189
    rna:hh:181~190 181~184
    9280 7m5d:1
    (2.8Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:1~1534 1686,1689,1700~1704,1831~1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1949,1959~1961
    rna:3:1~120 861~864,915~919,958,2339~2340
    rna:5:1~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2255,2439,2451,2601~
    2602
    9281 7m5d:2
    (2.8Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,783~784,899~900,1407~1409,
    1418,1428~1429,1473~1475,1483~
    1484,1493~1496,1517
    rna:4:13~27 530,693,926,1054,1196,1397,140
    0,1402,1492~1493,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    9282 7m5d:3
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    9283 7m5d:4
    (2.8Å)
    		 15 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:1~1534 13~24
    rna:5:1~76 16~18
    9284 7m5d:5
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEACF3 RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 2,10~12,24~25,74~76
    rna:2:1~1534 29~31,34,38~41
    rna:4:13~27 34~37
    9285 7md7:1A
    (2.8Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1700~1704,1832,1837,1846,1848,
    1895,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    9286 7md7:1B
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    9287 7md7:1a
    (2.8Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1484,14
    91~1496,1517
    9288 7md7:2A
    (2.8Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1950,
    1959~1961,2863~2864
    9289 7md7:2B
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly2
    rna:2A:6~2897 78~81,90,97~102
    9290 7md7:2a
    (2.8Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 33916420 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1420,1429,1442A,1473~1475
    ,1483~1484,1491~1496,1517
    9291 7mdz:2
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Oryctolagus
    cuniculus
    9986    		 34403584 Assembly1
    rna:5:1~5069 3,12~13,24,74~76
    rna:9:1~1869 30~32,34,38~41
    rna:6:16~25 34~37
    9292 7mdz:5
    (3.2Å)
    		 3541 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF67 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 34403584 Assembly1
    rna:7:1~119 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 1~22,58,146~147,339,341~348,35
    0~353,356~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2487,2508,25
    42~2544,2778~2779,3891
    rna:2:1~76 3770~3771,4196~4198,4200,4396~
    4397,4531,4548
    rna:9:1~1869 1563~1564,2884~2885,3629,3699,
    3712,3759~3760,3763,3766~3767,
    3794~3796,3806~3807,3834
    9293 7mdz:6
    (3.2Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 34403584 Assembly1
    rna:2:1~76 19~21
    rna:9:1~1869 16~23,25
    9294 7mdz:7
    (3.2Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 34403584 Assembly1
    rna:5:1~5069 77~80,84,88,98~103
    9295 7mdz:8
    (3.2Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 34403584 Assembly1
    rna:5:1~5069 4~22,24~37,40~41,53~54,103,108
    ,112~113,115,126~128,138~149,1
    51~156
    9296 7mdz:9
    (3.2Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000704D22 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 34403584 Assembly1
    rna:5:1~5069 677~678,970,1029,1052,1708~170
    9,1719,1721,1731~1732,1815~181
    6,1824,1826~1828,1849
    rna:2:1~76 1058,1248,1524,1639~1641,1701
    rna:6:16~25 961,1207,1698,1701~1702,1825,1
    830,1838
    9297 7mpi:A1
    (3.05Å)
    		 3137 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358E2 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 35489333
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:B5:1~1798 846~848,1921,1933,1935~1936,21
    24~2125,2191,2196,2206~2208,22
    55~2257,2262~2263,2290~2292,23
    02~2304
    rna:A3:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:A4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,656~657,691,1394~1395,1397
    ~1399,1418~1420,1441,1530,1558
    ,1572,1584~1585,1618~1620,1830
    ~1832,2386,2585,2994~2995
    9298 7mpi:A3
    (3.05Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35489333 Assembly1
    rna:A1:3~3396 79~82,86,90,100,102~104
    9299 7mpi:A4
    (3.05Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35489333
    441    		 Assembly1
    rna:A1:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,125~127,129,136
    ~152,154~157
    9300 7mpi:B5
    (3.05Å)
    		 1781 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358CA RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 35489333
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:A1:3~3396 628~629,913,971~973,995,1123,1
    644,1646,1655~1657,1667~1668,1
    737~1738,1746~1747,1756~1758,1
    780
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.