Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

FURNA
Download all results in tab-seperated text for 14210 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    9401 7nfx:5
    (3.2Å)
    		 3493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A2 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:7:1~120 1736~1739,1741,1792~1795,1894,
    1909,1936,1942~1943
    rna:8:1~156 1~2,4~22,58,146~147,339,341~34
    8,350~353,356~357,360,362,379~
    380,415~430,1304~1305,1333~133
    4,1371,2308~2309,2312~2313,233
    3~2334,2355,2444,2472,2487,250
    8~2509,2542,2544,2778~2780,389
    0,4162~4163
    9402 7nfx:7
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:5:1~5069 77~79,84,88,98,100~103
    9403 7nfx:8
    (3.2Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:5:1~5069 3~22,24~29,31~37,40~41,53~54,1
    03,108,110~113,115,125~126,128
    ,136,138~156
    9404 7nga:X
    (3.9Å)
    		 15 N/A URS0000E60BC3 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:Y:1~15 1~15
    9405 7nga:Y
    (3.9Å)
    		 15 N/A URS0000E60B84 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:X:1~15 1~15
    9406 7nha:D
    (2.91Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9407 7nhc:D
    (2.87Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9408 7nhk:A
    (2.9Å)
    		 2905 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A01 RF02540
    RF02541
    RF00002    		 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:B:2~115 901~903,955,957~958,997~998
    rna:a:9~1567 1742~1743,1745,1860,1925~1929,
    1932~1933,1960~1961,1972~1973
    rna:D:1~74 1921~1922,1935~1937
    9409 7nhk:B
    (2.9Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000240630 RF00001 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 76~79,87,95,97~98
    9410 7nhk:D
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023119F2 RF00005 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 11~13,25~26
    rna:a:9~1567 31~33,35,39,41~42
    rna:b:1~19 35~38
    9411 7nhk:a
    (2.9Å)
    		 1517 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A16 RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 728,1434~1435,1444,1455,1501~1
    502,1510~1511,1521~1522,1544
    rna:D:1~74 816,993,1255~1256,1364~1366,14
    26
    rna:b:1~19 556,749,953,1423,1426~1427,142
    9,1519~1520,1525,1561~1567
    9412 7nhk:b
    (2.9Å)
    		 13 N/A N/A N/A Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:a:9~1567 1~6,13~19
    rna:D:1~74 13~15
    9413 7nhl:A
    (3.1Å)
    		 2914 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000024712F RF02540
    RF02541
    RF00002    		 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:D:2~74 1934~1936,1949~1951
    rna:a:7~1552 1746~1747,1875,1939~1942,1946~
    1947,1974~1975,1986~1988
    rna:B:2~114 906~908,960~964,1002,2367
    9414 7nhl:B
    (3.1Å)
    		 113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 39,76~79,85,87,94~97
    9415 7nhl:D
    (3.1Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000231199A RF00005 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 11~13,25~26
    rna:a:7~1552 31~32,35,39,41~42
    rna:b:1~15 35~38
    9416 7nhl:a
    (3.1Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119DF RF00177
    RF01959
    RF01960    		 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:D:2~74 798,976,1240~1241,1349~1351,14
    11
    rna:A:3~2920 710,1418~1420,1429,1440,1485,1
    495~1496,1504~1508,1529
    rna:b:1~15 731,936,1411~1412,1510,1546~15
    52
    9417 7nhm:A
    (3.1Å)
    		 2824 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000024712F RF02540
    RF02541
    RF00002    		 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:a:7~1552 1859,1864,1873,1875,1939~1942,
    1946~1947,1974~1975,1986~1987
    rna:B:2~114 906~908,960,962~964,994~995,10
    02,2367
    rna:D:1~77 1936,1949~1950,2090~2091,2278~
    2280,2282,2477~2478,2629
    9418 7nhm:B
    (3.1Å)
    		 113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 39,76~79,85,87,93~97
    9419 7nhm:D
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002311A33 RF00005 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 3,11~12,25~26,75~77
    rna:a:7~1552 31~32,35,39,41~42
    rna:b:1~15 35~38
    9420 7nhm:a
    (3.1Å)
    		 1531 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119DF RF00177
    RF01959
    RF01960    		 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 710,792,909,1418~1420,1429,144
    0,1495~1496,1504,1506~1508,152
    9
    rna:b:1~15 730~731,936,1411~1412,1414,151
    0,1548~1552
    rna:D:1~77 798,976,1240,1349~1351,1411
    9421 7nhn:A
    (2.9Å)
    		 2908 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D28EF9 RF02540
    RF02541
    RF00002    		 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:D:2~75 1940~1941,1955~1957
    rna:a:9~1550 1752~1753,1945~1946,1948~1949,
    1952~1953,1980~1981,1992~1993
    rna:B:2~115 908~910,962,964~965,1004
    9422 7nhn:B
    (2.9Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A24 RF00001 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:A:3~2930 76~79,87~88,95~98
    9423 7nhn:D
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002311A03 RF00005 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:b:2~15 35~38
    rna:A:3~2930 12~13,25~26
    rna:a:9~1550 31~33,35,39,41~42
    9424 7nhn:a
    (2.9Å)
    		 1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A12 RF00177
    RF01959
    RF01960    		 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:D:2~75 800,977,1238~1239,1347~1350,14
    09
    rna:b:2~15 733,937,1409~1410,1508,1544~15
    49
    rna:A:3~2930 1416~1418,1427,1438,1493~1494,
    1504~1506,1527
    9425 7nhx:F
    (3.23Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13,15
    9426 7ni0:D
    (3.32Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13,15
    9427 7nic:X
    (4.3Å)
    		 15 N/A URS0000E60BB0 N/A synthetic
    construct
    32630    		 34795277 Assembly1
    rna:Y:16~30 16~30
    9428 7nic:Y
    (4.3Å)
    		 15 N/A URS0000E60BD6 N/A synthetic
    construct
    32630    		 34795277 Assembly1
    rna:X:16~30 17~30
    9429 7nik:D
    (6.2Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9430 7nil:D
    (5.01Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9431 7niq:C
    (4.3Å)
    		 14 N/A URS0002311A2C N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:G:1~14 1~14
    9432 7niq:G
    (4.3Å)
    		 14 N/A URS0002311966 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:C:1~14 1~14
    9433 7nir:D
    (6.7Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9434 7nis:D
    (5.96Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9435 7nj3:D
    (4.48Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9436 7nj4:D
    (5.84Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9437 7nj5:D
    (4.63Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9438 7nj7:D
    (4.82Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9439 7nk1:D
    (4.22Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9440 7nk2:D
    (4.84Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9441 7nk4:D
    (5.32Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9442 7nk6:D
    (6.72Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9443 7nk8:D
    (5.34Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9444 7nka:D
    (4.07Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9445 7nkc:D
    (4.46Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9446 7nki:D
    (4.67Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9447 7nkr:D
    (5.6Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9448 7nqh:AA
    (3.5Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177
    RF01959    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~9 256,681,844,918~919,924
    rna:BA:1~1571 851~852,862,864,909~910,919~92
    2,943
    9449 7nqh:AV
    (3.5Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 33878294
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:AA:3~962 26~28,31,35~38
    rna:AX:1~9 31~34
    rna:BA:1~1571 3,11~13,21~22,69~71
    9450 7nqh:BA
    (3.5Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541
    RF02540    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908~909,911,914~915,942~944,95
    4~956
    rna:AV:1~71 903~905,917~919,1151~1153,1155
    ,1262,1273~1274,1408,1425
    9451 7nql:AA
    (3.4Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177
    RF01959    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 851~852,862~864,909~910,919~92
    1,943
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~6 346,530,844~845,924
    9452 7nql:AV
    (3.4Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 33878294
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:BA:1~1571 2~3,11~13,21~22,69~71
    rna:AA:3~962 26~29,31,35~38
    rna:AX:1~6 31~34
    9453 7nql:BA
    (3.4Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541
    RF02540    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908~909,911,914~915,942~944,95
    4~956
    rna:AV:1~71 903~904,917~919,1059,1152~1153
    ,1155,1262,1273~1274,1408,1425
    9454 7nrc:LA
    (3.9Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 846~848,1935~1936,2124~2125,22
    07,2255~2256,2259,2262~2263,22
    90~2292,2302~2303,2330
    rna:Sm:1~76 2256,2258,2839,2851~2852,2862,
    2876,2922~2924,2952~2953,2971
    rna:Sn:1~76 2251~2252,2265~2267,2619~2621,
    2808,2819~2820,2970~2971
    rna:LB:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,158
    4~1585,1618,1830~1832,2386,258
    5,2994~2995
    9455 7nrc:LB
    (3.9Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 79~82,86,90,100,102~104
    9456 7nrc:LC
    (3.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 1,3~22,24~37,40~41,53~54,104,1
    06,109,113~115,126,129,136~157
    9457 7nrc:S2
    (3.9Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:Sl:1~6 577,1150,1637~1638,1755~1756,1
    761
    rna:Sm:1~76 577~578,1274,1756
    rna:Sn:1~76 1001,1191,1462~1463,1576~1577,
    1637
    rna:LA:3~3396 628~629,913,971~973,1644~1645,
    1655~1657,1667,1746~1747,1756~
    1759,1780
    9458 7nrc:Sm
    (3.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 34~37
    rna:Sl:1~6 34~37
    rna:LA:3~3396 25,37,63~64,74~76
    9459 7nrc:Sn
    (3.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED942 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 30~31,34,38,40~41
    rna:Sl:1~6 34~37
    rna:LA:3~3396 11~13,24~25,74~76
    9460 7nrd:LA
    (4.36Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 846~848,2125,2206,2255,2262~22
    63,2290~2292,2302~2304
    rna:Sn:1~76 2253,2256,2620,2678,2819~2820,
    2970~2972
    rna:Sm:1~77 2211,2765
    rna:LB:1~121 996~998,1055~1056,1171,1197,12
    03~1204
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394,1398~1399,141
    9~1420,1441,1530,1584,1618,183
    0~1831,2386,2585,2994~2995
    9461 7nrd:LB
    (4.36Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 79~82,86,90,99~100,102~103
    9462 7nrd:LC
    (4.36Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 1,3~22,24~37,40~41,54,104,109,
    112,114~115,118,129,136~157
    9463 7nrd:S2
    (4.36Å)
    		 1783 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S3:20~51 11,489,577,1150,1637~1638,1640
    ,1755~1756,1761,1769~1770,1800
    rna:Sn:1~76 577,1180,1274,1756
    rna:Sm:1~77 1001,1191,1462~1463,1576~1577
    rna:LA:3~3396 628~629,913,971~973,1644~1645,
    1655~1657,1746~1747,1757~1758
    9464 7nrd:S3
    (4.36Å)
    		 32 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 20,25,27~34,37,44
    rna:Sn:1~76 32,34
    rna:Sm:1~77 29~31
    9465 7nrd:Sm
    (4.36Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 31~33,35,39,41~42
    rna:S3:20~51 35~38
    rna:LA:3~3396 72,76
    9466 7nrd:Sn
    (4.36Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED942 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 33~34,36~37,42
    rna:S3:20~51 34,37
    rna:LA:3~3396 12,37,56,74~76
    9467 7nsi:AA
    (4.6Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177
    RF01959    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AV:1~71 430,782~783
    rna:AX:2~6 429,530,844~845,847,924
    rna:BA:1~1571 851~852,862~864,909~910,920~92
    1
    9468 7nsi:AV
    (4.6Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 34~35,37~38
    rna:AX:2~6 31,33
    9469 7nsi:BA
    (4.6Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541
    RF02540    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908,914,942~945,954~956
    rna:AV:1~71 1235~1236,1245,1255
    9470 7nsj:AA
    (3.9Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177
    RF01959    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 851~852,862,909~910,920~921,94
    3
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~6 844~845,847,918~919,924
    9471 7nsj:AV
    (3.9Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 26~29,31,35~38
    rna:BA:1~1571 12~13,22,69~71
    9472 7nsj:AY
    (3.9Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 69~71
    9473 7nsj:BA
    (3.9Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541
    RF02540    		 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908,911,914~915,943,954~955
    rna:AV:1~71 903~904,917~919,1059,1151~1153
    ,1155,1273~1274,1408
    rna:AY:1~71 1232~1235,1245~1248
    9474 7nso:8
    (2.9Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 12,25,85~87
    rna:6:25~27 35~38
    rna:a:1~1540 31~33,35,39,42
    9475 7nso:A
    (2.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:B:1~120 861~864,915,917~918,958,2340
    rna:8:1~87 1923,2064,2251~2253,2255,2450~
    2451,2585,2602
    rna:a:1~1540 1700~1704,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961
    9476 7nso:B
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 41,78~80,89,97,99~100
    9477 7nso:a
    (2.9Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492,149
    4~1496,1517
    rna:6:25~27 926,1400~1401,1498
    rna:8:1~87 790,966,1229~1230,1338~1341,14
    00
    9478 7nsp:8
    (3.5Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 12,85~87
    rna:6:25~30 35~37
    rna:a:1~1540 31~33,35,39,41~42
    9479 7nsp:A
    (3.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:B:1~120 861~863,917~919,958,2339~2340
    rna:8:1~87 1923,2251~2253,2255,2450~2451,
    2602
    rna:a:1~1540 1700~1703,1831~1832,1837,1846,
    1848,1912,1914~1916,1919~1920,
    1947~1948,1959~1961
    rna:v:1~77 896,1913,2553,2555,2602
    9480 7nsp:B
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 41,78~81,89~90,96~97,99~100
    9481 7nsp:a
    (3.5Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 702,784,899~900,1407~1409,1418
    ,1429,1474,1483~1484,1494~1496
    ,1517
    rna:6:25~30 530,926,1400,1492~1493,1498
    rna:8:1~87 790,966,1338~1340,1400
    rna:v:1~77 530,1054,1493
    9482 7nsp:v
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000349C05 RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 38~39,57,76~77
    rna:6:25~30 35~38
    rna:a:1~1540 35~37
    9483 7nsq:8
    (3.1Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 12,25~26,85~87
    rna:6:25~30 35~38
    rna:a:1~1540 31~33,35,39~42
    9484 7nsq:A
    (3.1Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:B:1~120 861~864,915,917~919,958,2340
    rna:8:1~87 1908,1922~1923,2251~2253,2255,
    2450~2451,2602
    rna:a:1~1540 1689,1701~1703,1832,1837,1846,
    1848,1895,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961
    rna:v:1~77 896~897,1913,2470,2482~2483,24
    93,2507,2553,2555,2573,2602
    9485 7nsq:B
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 41,78~81,89~90,96~97,99~100
    9486 7nsq:a
    (3.1Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517
    rna:6:25~30 530,926,1400,1492~1493,1498
    rna:8:1~87 790,966,1229~1230,1338~1340,14
    00
    rna:v:1~77 530,1054,1493
    9487 7nsq:v
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000349C05 RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 20,38~39,53,57,64,76~77
    rna:6:25~30 35~38
    rna:a:1~1540 35~38
    9488 7nwg:33
    (3.8Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000231197C RF00005 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:51:1~5069 18,55,75
    rna:A2:1~1869 31,33,37
    rna:v3:24~41 33~36
    9489 7nwg:51
    (3.8Å)
    		 3626 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A0B RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:71:1~120 1736~1739,1741,1794~1796,1909,
    1936
    rna:81:1~156 2,4~12,14~22,58,339,342~348,35
    1~352,357,360,362,379~380,415~
    419,421~430,2308,2444,2487,249
    3~2494,2542,2544,2779,3890
    rna:A2:1~1869 1563~1564,3629,3759,3766~3767,
    3796,3806
    rna:q3:1~76 3760,4197~4198,4255,4397,4548
    rna:33:1~75 3958,4046,4341~4342,4370~4371
    9490 7nwg:71
    (3.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:51:1~5069 77~79,84,98,101~103
    9491 7nwg:81
    (3.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C3A RF00002 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:51:1~5069 3~13,15~22,24~37,53,103,112,12
    4~128,139~149,152~156
    9492 7nwg:A2
    (3.8Å)
    		 1740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119DC RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:51:1~5069 1028~1029,1708~1710,1719~1721,
    1826
    rna:q3:1~76 626,1331,1825
    rna:v3:24~41 626,1701~1702,1825
    rna:33:1~75 1058,1248,1639,1641
    9493 7nwg:q3
    (3.8Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... URS0002311A0F RF00005 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:51:1~5069 38,56,74~76
    rna:A2:1~1869 34~37
    rna:v3:24~41 34~37
    9494 7nwg:v3
    (3.8Å)
    		 18 N/A N/A N/A Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:A2:1~1869 31,33~34
    rna:q3:1~76 32~35
    rna:33:1~75 29~31
    9495 7nwh:5
    (4.1Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311970 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:7:1~120 1741,1792,1795,1936
    rna:8:1~156 1~12,14~22,58,339,342~348,350~
    353,357,360,362,379~380,415~42
    3,425~430,2444,2487~2488,2544,
    2778
    rna:9:1~1869 1563~1564,3629,3710,3759~3761,
    3766,3794~3796,3806~3807
    9496 7nwh:7
    (4.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:5:1~5069 79,84,98,101,103
    9497 7nwh:8
    (4.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C3A RF00002 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:5:1~5069 4~13,15~22,24~36,40,53,112~113
    ,124~126,137~149,151~156
    9498 7nwh:9
    (4.1Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A7 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:hh:41~55 1207,1489,1698,1701~1702,1835,
    1837~1838
    rna:5:1~5069 970,1029~1030,1708,1710~1711,1
    719~1721,1815~1816,1825~1827
    9499 7nwh:hh
    (4.1Å)
    		 15 N/A N/A N/A Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:9:1~1869 42,44~46,48,53~54
    9500 7nwi:2
    (3.13Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... URS0000868530 RF00005 Oryctolagus
    cuniculus
    9986    		 34157102 Assembly1
    rna:5:1~5069 74~76
    rna:9:1~1868 30~31,34,38,40
    rna:K:43~52 34~37
    << < 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 > >>
    Go to page

    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

    • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218