SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    9401 7n31:5
    (2.69Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 34234344 Assembly1
    rna:23:1~2904 41,78~81,89~90,96~97,99~100
    9402 7n31:Dt
    (2.69Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 34234344 Assembly1
    rna:16:1~1533 34,37~38
    rna:mR:39~50 34~37
    rna:23:1~2904 3~4,19~20,56,70~72,75~76
    9403 7n31:Pt
    (2.69Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 34234344 Assembly1
    rna:16:1~1533 30~32,34,38,40~41
    rna:mR:39~50 34~37
    rna:23:1~2904 11~12,74~76
    9404 7n31:mR
    (2.69Å)
    		 12 N/A N/A N/A Escherichia
    coli
    BL21
    511693    		 34234344 Assembly1
    rna:16:1~1533 39~40,43~46,49~50
    rna:Pt:1~76 42~45
    rna:Dt:1~76 40~42
    9405 7n8b:A1
    (3.05Å)
    		 3156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358ED RF02543 Saccharomyces
    cerevisiae
    4932    		 35489333
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:A3:1~121 996~999,1052~1056,1156,1171,11
    97,1203
    rna:A4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,656~657,691,1394~1395,1398
    ~1399,1418~1420,1441,1530,1558
    ,1584~1585,1618~1620,1830~1832
    ,2386,2585,2994~2995
    rna:B5:1~1800 846~848,1935~1936,2124~2125,21
    91,2207~2208,2255~2257,2260,22
    62~2264,2290~2292,2302~2304
    9406 7n8b:A3
    (3.05Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35489333 Assembly1
    rna:A1:3~3396 79~82,86,90,100,102~104
    9407 7n8b:A4
    (3.05Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35489333
    441    		 Assembly1
    rna:A1:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,106,109,112~115,125~126,129
    ,136~152,154~157
    9408 7n8b:B5
    (3.05Å)
    		 1783 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358D9 RF01960 Saccharomyces
    cerevisiae
    4932    		 35489333
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:A1:3~3396 628~629,913,971~973,1002~1003,
    1124,1644~1646,1655~1657,1667~
    1668,1746~1747,1757~1758,1780
    9409 7nac:1
    (3.04Å)
    		 2661 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000261776E RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656,691,1394~1395,1399,1418~
    1420,1441,1530,1558,1585,1619~
    1620,1830~1831,2386,2994~2995
    rna:6:1~232 1,3,1570
    9410 7nac:2
    (3.04Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,52~53,1
    04,109,114~115,128,136~150,152
    ~157
    9411 7nac:6
    (3.04Å)
    		 87 N/A URS000261775E N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,228,230
    9412 7nad:1
    (3.04Å)
    		 697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000261777B RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:2:42~153 1530,1558,1584~1585,1619~1620,
    1831~1832
    9413 7nad:2
    (3.04Å)
    		 59 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002617755 RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:820~3372 109~110,114~115,128,149
    9414 7nbu:A
    (3.11Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358EE RF00177 Escherichia
    coli
    562    		 35552387 Assembly1
    rna:V:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:X:24~33 693,926,1397,1400~1402,1493,14
    98
    rna:a:1~2903 702,784,1407~1408,1418~1419,14
    29,1474,1483~1484,1492~1496,15
    17
    9415 7nbu:V
    (3.11Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    K-12
    83333    		 35552387 Assembly1
    rna:A:2~1540 31~33,35,39,41~42
    rna:X:24~33 35~38
    rna:a:1~2903 11~12,25~26,75~77
    9416 7nbu:X
    (3.11Å)
    		 10 N/A N/A N/A Mycobacterium
    tuberculosis
    H37Rv
    83332    		 35552387 Assembly1
    rna:A:2~1540 24,26~29,33
    rna:V:1~77 27~29
    9417 7nbu:a
    (3.11Å)
    		 2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000024A55C RF02541 Escherichia
    coli
    K-12
    83333    		 35552387 Assembly1
    rna:A:2~1540 1701~1703,1837,1846,1848,1912~
    1913,1916,1919~1920,1947~1949,
    1959~1961
    rna:V:1~77 1908~1909,1922~1923,2251~2253,
    2450~2451,2602
    rna:W:76~77 2394~2395,2421~2422,2432
    rna:b:1~120 861~864,915,917~919,958,2340
    9418 7nbu:b
    (3.11Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 35552387 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    9419 7nfx:5
    (3.2Å)
    		 3493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A2 RF02543 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:7:1~120 1736~1739,1741,1792~1795,1894,
    1909,1936,1942~1943
    rna:8:1~156 1~2,4~22,58,146~147,339,341~34
    8,350~353,356~357,360,362,379~
    380,415~430,1304~1305,1333~133
    4,1371,2308~2309,2312~2313,233
    3~2334,2355,2444,2472,2487,250
    8~2509,2542,2544,2778~2780,389
    0,4162~4163
    9420 7nfx:7
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:5:1~5069 77~79,84,88,98,100~103
    9421 7nfx:8
    (3.2Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 34020957 Assembly1
    rna:5:1~5069 3~22,24~29,31~37,40~41,53~54,1
    03,108,110~113,115,125~126,128
    ,136,138~156
    9422 7nga:X
    (3.9Å)
    		 15 N/A URS0000E60BC3 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:Y:1~15 1~15
    9423 7nga:Y
    (3.9Å)
    		 15 N/A URS0000E60B84 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:X:1~15 1~15
    9424 7nha:D
    (2.91Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9425 7nhc:D
    (2.87Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9426 7nhk:A
    (2.9Å)
    		 2905 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A01 RF02541 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:B:2~115 901~903,955,957~958,997~998
    rna:a:9~1567 1742~1743,1745,1860,1925~1929,
    1932~1933,1960~1961,1972~1973
    rna:D:1~74 1921~1922,1935~1937
    9427 7nhk:B
    (2.9Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000240630 RF00001 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 76~79,87,95,97~98
    9428 7nhk:D
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023119F2 RF00005 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 11~13,25~26
    rna:a:9~1567 31~33,35,39,41~42
    rna:b:1~19 35~38
    9429 7nhk:a
    (2.9Å)
    		 1517 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A16 RF00177 Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:A:3~2911 728,1434~1435,1444,1455,1501~1
    502,1510~1511,1521~1522,1544
    rna:D:1~74 816,993,1255~1256,1364~1366,14
    26
    rna:b:1~19 556,749,953,1423,1426~1427,142
    9,1519~1520,1525,1561~1567
    9430 7nhk:b
    (2.9Å)
    		 13 N/A N/A N/A Enterococcus
    faecalis
    1351    		 34117249 Assembly1
    rna:a:9~1567 1~6,13~19
    rna:D:1~74 13~15
    9431 7nhl:A
    (3.1Å)
    		 2914 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000024712F RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:D:2~74 1934~1936,1949~1951
    rna:a:7~1552 1746~1747,1875,1939~1942,1946~
    1947,1974~1975,1986~1988
    rna:B:2~114 906~908,960~964,1002,2367
    9432 7nhl:B
    (3.1Å)
    		 113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 39,76~79,85,87,94~97
    9433 7nhl:D
    (3.1Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000231199A RF00005 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 11~13,25~26
    rna:a:7~1552 31~32,35,39,41~42
    rna:b:1~15 35~38
    9434 7nhl:a
    (3.1Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119DF RF00177 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:D:2~74 798,976,1240~1241,1349~1351,14
    11
    rna:A:3~2920 710,1418~1420,1429,1440,1485,1
    495~1496,1504~1508,1529
    rna:b:1~15 731,936,1411~1412,1510,1546~15
    52
    9435 7nhm:A
    (3.1Å)
    		 2824 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000024712F RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:a:7~1552 1859,1864,1873,1875,1939~1942,
    1946~1947,1974~1975,1986~1987
    rna:B:2~114 906~908,960,962~964,994~995,10
    02,2367
    rna:D:1~77 1936,1949~1950,2090~2091,2278~
    2280,2282,2477~2478,2629
    9436 7nhm:B
    (3.1Å)
    		 113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 39,76~79,85,87,93~97
    9437 7nhm:D
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002311A33 RF00005 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 3,11~12,25~26,75~77
    rna:a:7~1552 31~32,35,39,41~42
    rna:b:1~15 35~38
    9438 7nhm:a
    (3.1Å)
    		 1531 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119DF RF00177 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 34117249 Assembly1
    rna:A:3~2920 710,792,909,1418~1420,1429,144
    0,1495~1496,1504,1506~1508,152
    9
    rna:b:1~15 730~731,936,1411~1412,1414,151
    0,1548~1552
    rna:D:1~77 798,976,1240,1349~1351,1411
    9439 7nhn:A
    (2.9Å)
    		 2908 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D28EF9 RF02541 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:D:2~75 1940~1941,1955~1957
    rna:a:9~1550 1752~1753,1945~1946,1948~1949,
    1952~1953,1980~1981,1992~1993
    rna:B:2~115 908~910,962,964~965,1004
    9440 7nhn:B
    (2.9Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A24 RF00001 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:A:3~2930 76~79,87~88,95~98
    9441 7nhn:D
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002311A03 RF00005 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:b:2~15 35~38
    rna:A:3~2930 12~13,25~26
    rna:a:9~1550 31~33,35,39,41~42
    9442 7nhn:a
    (2.9Å)
    		 1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A12 RF00177 Listeria
    monocytogenes
    EGD-e
    169963    		 34117249 Assembly1
    rna:D:2~75 800,977,1238~1239,1347~1350,14
    09
    rna:b:2~15 733,937,1409~1410,1508,1544~15
    49
    rna:A:3~2930 1416~1418,1427,1438,1493~1494,
    1504~1506,1527
    9443 7nhx:F
    (3.23Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13,15
    9444 7ni0:D
    (3.32Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13,15
    9445 7nic:X
    (4.3Å)
    		 15 N/A URS0000E60BB0 N/A synthetic
    construct
    32630    		 34795277 Assembly1
    rna:Y:16~30 16~30
    9446 7nic:Y
    (4.3Å)
    		 15 N/A URS0000E60BD6 N/A synthetic
    construct
    32630    		 34795277 Assembly1
    rna:X:16~30 17~30
    9447 7nik:D
    (6.2Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9448 7nil:D
    (5.01Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9449 7niq:C
    (4.3Å)
    		 14 N/A URS0002311A2C N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:G:1~14 1~14
    9450 7niq:G
    (4.3Å)
    		 14 N/A URS0002311966 N/A Cystovirus
    phi6
    10879    		 34795277 Assembly1
    rna:C:1~14 1~14
    9451 7nir:D
    (6.7Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9452 7nis:D
    (5.96Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9453 7nj3:D
    (4.48Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9454 7nj4:D
    (5.84Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9455 7nj5:D
    (4.63Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9456 7nj7:D
    (4.82Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9457 7nk1:D
    (4.22Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9458 7nk2:D
    (4.84Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9459 7nk4:D
    (5.32Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9460 7nk6:D
    (6.72Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9461 7nk8:D
    (5.34Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9462 7nka:D
    (4.07Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9463 7nkc:D
    (4.46Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9464 7nki:D
    (4.67Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 35017564 Assembly1
    rna:E:1~8 11~13
    9465 7nkr:D
    (5.6Å)
    		 15 N/A URS000197CF81 N/A synthetic
    construct
    32630    		 35017564 Assembly1
    rna:E:1~8 11~13
    9466 7nqh:AA
    (3.5Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~9 256,681,844,918~919,924
    rna:BA:1~1571 851~852,862,864,909~910,919~92
    2,943
    9467 7nqh:AV
    (3.5Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 33878294
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:AA:3~962 26~28,31,35~38
    rna:AX:1~9 31~34
    rna:BA:1~1571 3,11~13,21~22,69~71
    9468 7nqh:BA
    (3.5Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908~909,911,914~915,942~944,95
    4~956
    rna:AV:1~71 903~905,917~919,1151~1153,1155
    ,1262,1273~1274,1408,1425
    9469 7nql:AA
    (3.4Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 851~852,862~864,909~910,919~92
    1,943
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~6 346,530,844~845,924
    9470 7nql:AV
    (3.4Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 33878294
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:BA:1~1571 2~3,11~13,21~22,69~71
    rna:AA:3~962 26~29,31,35~38
    rna:AX:1~6 31~34
    9471 7nql:BA
    (3.4Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908~909,911,914~915,942~944,95
    4~956
    rna:AV:1~71 903~904,917~919,1059,1152~1153
    ,1155,1262,1273~1274,1408,1425
    9472 7nrc:LA
    (3.9Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 846~848,1935~1936,2124~2125,22
    07,2255~2256,2259,2262~2263,22
    90~2292,2302~2303,2330
    rna:Sm:1~76 2256,2258,2839,2851~2852,2862,
    2876,2922~2924,2952~2953,2971
    rna:Sn:1~76 2251~2252,2265~2267,2619~2621,
    2808,2819~2820,2970~2971
    rna:LB:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,158
    4~1585,1618,1830~1832,2386,258
    5,2994~2995
    9473 7nrc:LB
    (3.9Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 79~82,86,90,100,102~104
    9474 7nrc:LC
    (3.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 1,3~22,24~37,40~41,53~54,104,1
    06,109,113~115,126,129,136~157
    9475 7nrc:S2
    (3.9Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:Sl:1~6 577,1150,1637~1638,1755~1756,1
    761
    rna:Sm:1~76 577~578,1274,1756
    rna:Sn:1~76 1001,1191,1462~1463,1576~1577,
    1637
    rna:LA:3~3396 628~629,913,971~973,1644~1645,
    1655~1657,1667,1746~1747,1756~
    1759,1780
    9476 7nrc:Sm
    (3.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 34~37
    rna:Sl:1~6 34~37
    rna:LA:3~3396 25,37,63~64,74~76
    9477 7nrc:Sn
    (3.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED942 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1799 30~31,34,38,40~41
    rna:Sl:1~6 34~37
    rna:LA:3~3396 11~13,24~25,74~76
    9478 7nrd:LA
    (4.36Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 846~848,2125,2206,2255,2262~22
    63,2290~2292,2302~2304
    rna:Sn:1~76 2253,2256,2620,2678,2819~2820,
    2970~2972
    rna:Sm:1~77 2211,2765
    rna:LB:1~121 996~998,1055~1056,1171,1197,12
    03~1204
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394,1398~1399,141
    9~1420,1441,1530,1584,1618,183
    0~1831,2386,2585,2994~2995
    9479 7nrd:LB
    (4.36Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 79~82,86,90,99~100,102~103
    9480 7nrd:LC
    (4.36Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:LA:3~3396 1,3~22,24~37,40~41,54,104,109,
    112,114~115,118,129,136~157
    9481 7nrd:S2
    (4.36Å)
    		 1783 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S3:20~51 11,489,577,1150,1637~1638,1640
    ,1755~1756,1761,1769~1770,1800
    rna:Sn:1~76 577,1180,1274,1756
    rna:Sm:1~77 1001,1191,1462~1463,1576~1577
    rna:LA:3~3396 628~629,913,971~973,1644~1645,
    1655~1657,1746~1747,1757~1758
    9482 7nrd:S3
    (4.36Å)
    		 32 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 20,25,27~34,37,44
    rna:Sn:1~76 32,34
    rna:Sm:1~77 29~31
    9483 7nrd:Sm
    (4.36Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 31~33,35,39,41~42
    rna:S3:20~51 35~38
    rna:LA:3~3396 72,76
    9484 7nrd:Sn
    (4.36Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED942 RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 33790014 Assembly1
    rna:S2:1~1800 33~34,36~37,42
    rna:S3:20~51 34,37
    rna:LA:3~3396 12,37,56,74~76
    9485 7nsi:AA
    (4.6Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AV:1~71 430,782~783
    rna:AX:2~6 429,530,844~845,847,924
    rna:BA:1~1571 851~852,862~864,909~910,920~92
    1
    9486 7nsi:AV
    (4.6Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 34~35,37~38
    rna:AX:2~6 31,33
    9487 7nsi:BA
    (4.6Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908,914,942~945,954~956
    rna:AV:1~71 1235~1236,1245,1255
    9488 7nsj:AA
    (3.9Å)
    		 960 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000CFF65 RF00177 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 851~852,862,909~910,920~921,94
    3
    rna:AV:1~71 430,571,713,782~784,844
    rna:AX:1~6 844~845,847,918~919,924
    9489 7nsj:AV
    (3.9Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 26~29,31,35~38
    rna:BA:1~1571 12~13,22,69~71
    9490 7nsj:AY
    (3.9Å)
    		 71 N/A URS00023119AA N/A Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:BA:1~1571 69~71
    9491 7nsj:BA
    (3.9Å)
    		 1544 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000022E3AE RF02541 Sus
    scrofa
    9823    		 33878294 Assembly1
    rna:AA:3~962 908,911,914~915,943,954~955
    rna:AV:1~71 903~904,917~919,1059,1151~1153
    ,1155,1273~1274,1408
    rna:AY:1~71 1232~1235,1245~1248
    9492 7nso:8
    (2.9Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 12,25,85~87
    rna:6:25~27 35~38
    rna:a:1~1540 31~33,35,39,42
    9493 7nso:A
    (2.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:B:1~120 861~864,915,917~918,958,2340
    rna:8:1~87 1923,2064,2251~2253,2255,2450~
    2451,2585,2602
    rna:a:1~1540 1700~1704,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961
    9494 7nso:B
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 41,78~80,89,97,99~100
    9495 7nso:a
    (2.9Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492,149
    4~1496,1517
    rna:6:25~27 926,1400~1401,1498
    rna:8:1~87 790,966,1229~1230,1338~1341,14
    00
    9496 7nsp:8
    (3.5Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 12,85~87
    rna:6:25~30 35~37
    rna:a:1~1540 31~33,35,39,41~42
    9497 7nsp:A
    (3.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:B:1~120 861~863,917~919,958,2339~2340
    rna:8:1~87 1923,2251~2253,2255,2450~2451,
    2602
    rna:a:1~1540 1700~1703,1831~1832,1837,1846,
    1848,1912,1914~1916,1919~1920,
    1947~1948,1959~1961
    rna:v:1~77 896,1913,2553,2555,2602
    9498 7nsp:B
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 41,78~81,89~90,96~97,99~100
    9499 7nsp:a
    (3.5Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 702,784,899~900,1407~1409,1418
    ,1429,1474,1483~1484,1494~1496
    ,1517
    rna:6:25~30 530,926,1400,1492~1493,1498
    rna:8:1~87 790,966,1338~1340,1400
    rna:v:1~77 530,1054,1493
    9500 7nsp:v
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000349C05 RF00005 Escherichia
    coli
    562    		 34294725 Assembly1
    rna:A:1~2903 38~39,57,76~77
    rna:6:25~30 35~38
    rna:a:1~1540 35~37
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.