SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    14201 9mor:2
    (2.65Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000081169C RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 702,784,899,1407~1408,1418,142
    9,1474,1483~1484,1492,1494~149
    5,1517

    rna:5:0~76 790,966,1229~1230,1338~1341,14
    00

    rna:6:1~77 693~695,789,1340
    rna:7:13~25 693,788~789,926,1196,1397,1400
    ~1402,1498
    14202 9mor:4
    (2.65Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 41,78,84,89,97~101
    14203 9mor:5
    (2.65Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 11~12,24~25,74~76
    rna:2:1~1534 29~32,34~35,38~42
    rna:7:13~25 34~37
    14204 9mor:6
    (2.65Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 20,57,71~72,76~77
    rna:2:1~1534 36~37,39
    14205 9mor:7
    (2.65Å)

    13 N/A N/A N/A Escherichia
    coli

    562
    39829893 Assembly1
    rna:2:1~1534 13~19,22~23
    rna:5:0~76 16~18
    14206 9mq4:1
    (2.78Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:2:1~1534 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961

    rna:4:1~120 861~864,915,917~919,958,2339~2
    340

    rna:5:0~76 1907~1909,1922~1924,2063,2251~
    2253,2255,2450~2451,2602

    rna:6:1~77 1851~1852,2394,2421~2422,2432
    14207 9mq4:2
    (2.78Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2~1496,1517

    rna:5:0~76 790,966,1229,1338~1340,1400
    rna:7:13~18 693,789,926,1400~1403,1498,150
    5
    14208 9mq4:4
    (2.78Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 41,78~81,89~90,96~97,99~100
    14209 9mq4:5
    (2.78Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 10~12,24~25,74~76
    rna:2:1~1534 29~32,34,38,40~41
    rna:7:13~18 34~37
    14210 9mq4:6
    (2.78Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 72,77
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.