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FURNA
Download all results in tab-seperated text for 1853 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1621 8qpk:4
    (4.2Å)

    76 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00015 Homo
    sapiens

    9606
    38778104
    750

    780
    Assembly1
    protein:R:369~474 68~70
    protein:S:699~777 65~67
    rna:6:31~76 1~17,55~64,66~68,74~80
    1622 8qpk:5
    (4.2Å)

    77 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Homo
    sapiens

    9606
    38778104
    1213

    1263

    42

    1267

    1355

    185

    s67

    1274

    1392

    1390
    Assembly1
    protein:A:56~2016 11~12,16~19,23,25~30,40,43,45~
    46,48~49,54~58

    protein:N:8~269 16,52~54
    rna:z:-3~8 41~43
    1623 8qpk:6
    (4.2Å)

    43 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Homo
    sapiens

    9606
    38778104
    1334

    s59

    M021_0.6
    Assembly1
    protein:L:341~390 54~55
    protein:A:56~2016 44~46
    protein:X:130~151 36,43
    rna:4:1~80 31~36,46~47,49~75
    rna:z:-3~8 40~45
    1624 8qrk:A
    (6.69Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    protein:0:4~218 703~707,722,805~808,844,1511,1
    513,1526~1532

    protein:3:128~197 763,937~938,1107,1143,1145~114
    9,1153~1155,1170~1171,1489~149
    0,1542,1553,1575,1581,1583~158
    5,1594

    protein:B:53~277 1116,1278~1279,1281,1293~1296
    protein:C:36~167 1264~1266,1302,1308,1319~1320,
    1322~1323

    protein:E:2~123 975,1008~1009,1033~1035,1123~1
    124,1126

    protein:F:35~242 1192~1195,1311,1314~1315,1368~
    1369,1383,1420,1431,1434,1456~
    1460,1464~1466

    protein:H:50~189 1217,1226~1227,1229,1264~1267,
    1309,1327~1329,1450

    protein:I:58~194 976,984~985,988~992,995,1003~1
    006,1012~1015,1066~1068,1084~1
    085,1571,1588,1590

    protein:J:31~138 674,676,755~756,782,825~826,89
    0~895,897,899~901,910~911,924~
    925,927~928,930~931,934,1133~1
    134,1162,1164,1495~1496,1555,1
    557

    protein:K:28~128 1227~1228,1230~1231,1233~1236,
    1248~1250,1254,1265,1309,1318,
    1332,1346~1347,1350,1401~1403,
    1442~1444,1453

    protein:L:63~236 761~764,773,776,780~781,945~94
    8,967~970,1025,1036~1039,1041,
    1051~1052,1149~1151

    protein:M:10~128 685,709,711~713,733~734,742~74
    3,795~796,798,837~841,846,853,
    855~856

    protein:N:4~113 727~728,749~751,766~769,774,77
    7~779,782,931~932

    protein:O:46~239 668,670,865,870~871,880~881,91
    6~919

    protein:P:46~142 965~966,974,1015~1020,1032~103
    3

    protein:Q:2~87 975~977,1015,1019,1589~1592,15
    97~1600

    protein:S:2~136 1114~1115,1119,1126,1280
    protein:T:2~169 683~684,795,855~857,932~933,95
    3,955~956,1131

    protein:U:27~202 698~700,702,710~713,734~735,74
    0~741,844~846

    protein:X:47~398 1374~1375,1377~1378,1380~1381,
    1383

    protein:Z:3~102 1245~1248,1250~1251,1334~1335,
    1337~1344,1398~1400

    protein:D:88~430 649~652,659~661,668~669,879,88
    1,904,906,928~929,932,1118,112
    0~1121,1174~1175,1260~1262,127
    8,1283~1287,1323~1326,1334,148
    2

    protein:G:50~396 877~878,881~883,906,1221~1222,
    1224~1225,1292,1307~1309,1311,
    1316~1317,1360~1362,1377,1426~
    1428,1430~1434,1450~1457

    protein:V:29~407 1522~1530
    NAD:A:1701 781~783,1046,1048
    SPM:A:1702 945~946,1044~1048,1110
    SRY:A:1703 898~899,1165~1167,1555~1556
    MG:A:1704 939~940
    MG:A:1708 1259,1327
    MG:A:1711 1563~1565
    MG:A:1719 653,664~665
    MG:A:1722 758,1146
    MG:A:1729 943,1102
    MG:A:1737 1350~1351
    MG:A:1738 1259,1327
    MG:A:1740 1392~1393
    MG:A:1741 1387,1389,1415
    MG:A:1743 1014~1015
    K:A:1749 702,706~708,842
    K:A:1750 717~720,791
    K:A:1751 890,900~901
    K:A:1752 1105~1107,1592~1593
    K:A:1753 1198~1200,1421
    K:A:1754 1198~1199,1361~1362
    K:A:1755 1199~1201
    K:A:1756 1256~1257,1330,1335~1337
    K:A:1757 1262,1328~1329
    K:A:1758 1330~1331,1333~1335
    K:A:1759 1365,1389~1390
    K:A:1760 1175~1177,1476~1477
    K:A:1761 1564~1565,1573,1586
    K:A:1762 1489~1491,1559~1560
    K:A:1763 801,803~806
    K:A:1764 835,838~839,850
    K:A:1765 886~889,905
    1625 8qrl:A
    (3.34Å)

    951 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    protein:B:53~277 1278~1281,1293~1299
    protein:C:36~167 1264~1267,1302,1306,1308,1319~
    1323

    protein:D:88~430 649~652,657,659~662,668~669,87
    9,881,904,928~929,932,1118,112
    1,1130,1174~1176,1250,1260~126
    2,1277~1278,1283~1287,1324,132
    6,1334,1336~1337,1482

    protein:E:2~119 975,1008~1009,1033~1035
    protein:F:35~239 1193~1194,1311~1312,1314~1315,
    1368~1369,1377,1383,1430~1431,
    1434~1435,1456~1461

    protein:G:53~396 1221,1224,1292~1293,1307~1309,
    1316~1317,1360,1362,1377,1426~
    1434,1451~1457

    protein:H:50~189 1217,1223,1226~1227,1229,1264~
    1267,1309~1310,1327~1329,1450~
    1452

    protein:I:58~194 976~978,984~985,988~993,995,10
    03~1006,1013~1015,1065~1069,10
    83~1085,1587~1588,1590

    protein:J:31~138 674~677,755~756,782,825~826,89
    2~895,897,900~901,910,923~925,
    927~928,930~931,934,1133~1134,
    1164,1166,1557~1558

    protein:K:28~128 1227~1228,1230~1231,1233~1237,
    1248~1250,1252,1254,1264~1265,
    1309~1310,1317~1318,1332~1333,
    1346~1347,1350,1401~1403,1441~
    1444

    protein:L:63~236 761~764,780~781,945~949,967~97
    0,1025,1036~1041,1045~1046,104
    9,1051~1052,1096,1149~1150,151
    6,1519

    protein:M:10~128 685,709,711~714,732~734,742~74
    5,795~798,837~841,846~847,853,
    855~856

    protein:N:4~113 727,749~751,766~769,774~775,77
    7~779,782,932

    protein:O:47~239 668~670,865,870~871,880~881,91
    6~919

    protein:P:46~142 965~966,975,1015~1020,1032~103
    3

    protein:Q:2~87 975~977,1006,1015,1019~1021,12
    93,1589~1592,1595,1597~1598

    protein:S:2~136 1115,1119,1126,1280
    protein:T:2~169 683~684,795,855~857,932~933,95
    3,955,1130~1131

    protein:U:27~202 698~702,710~713,734~735,740~74
    1,844~846,850

    protein:V:29~407 1522~1527,1529~1530
    protein:X:47~398 1374~1380,1382,1412
    protein:Z:3~102 1245~1248,1250~1251,1334~1335,
    1337~1344,1398,1400~1401

    protein:0:4~218 701,703~708,722,805~809,844,84
    6,1513,1525~1532

    protein:3:128~198 763,938~939,1107,1141,1143~114
    9,1153~1155,1169~1170,1478,148
    9~1490,1500~1501,1540,1552,156
    5,1574~1575,1581,1583~1584,159
    4

    protein:8:71~407 993,1076~1080,1083~1084,1559~1
    562,1571

    NAD:A:1701 781~783,948,1046,1048
    MG:A:1702 718~719,791
    MG:A:1703 938~940
    MG:A:1707 1090~1091
    MG:A:1708 1259,1327~1328
    MG:A:1711 1564~1565,1570
    MG:A:1712 1565,1570,1573
    MG:A:1714 947,1045
    MG:A:1716 1255,1345
    MG:A:1717 801,806
    MG:A:1718 815~816
    MG:A:1719 881~882
    MG:A:1720 674,828
    MG:A:1723 758,1146
    MG:A:1733 888,905
    MG:A:1736 1012~1013
    MG:A:1739 1218,1329
    MG:A:1741 1233~1235
    MG:A:1742 1259,1327
    MG:A:1745 1387~1388
    MG:A:1747 1218~1219
    MG:A:1749 1199~1200
    MG:A:1752 943,1102
    MG:A:1759 1566,1573
    MG:A:1762 1120,1122
    K:A:1763 702~703,707~708,842~843
    K:A:1764 717~720,791
    K:A:1765 1105,1107,1592~1593
    K:A:1766 1198~1200,1421
    K:A:1767 1198~1199,1361~1362
    K:A:1768 1256~1257,1330,1335~1337
    K:A:1769 1175~1177,1476~1477
    K:A:1770 1564~1565,1573,1586
    K:A:1771 800~801,803,805~806
    K:A:1772 835,837~839,850
    K:A:1773 1014~1015,1031
    K:A:1774 653~654,663~665
    K:A:1775 1330,1333~1335
    K:A:1776 1328~1329
    K:A:1777 876~878
    K:A:1778 1016~1018
    1626 8qrm:A
    (3.05Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    protein:B:53~277 1116,1278~1279,1281,1293~1296
    protein:C:36~167 1264~1266,1276,1300~1302,1308,
    1319~1323

    protein:D:88~430 649~652,659~661,668~669,879,88
    1,928~929,932,1118,1120~1121,1
    174~1175,1260~1262,1278,1283~1
    287,1323~1326,1334,1482

    protein:E:2~123 975,1008~1009,1033~1035,1123~1
    124,1126

    protein:F:35~242 1192~1195,1311,1314~1315,1368~
    1369,1383,1420,1431,1434,1456~
    1460,1464~1466

    protein:G:50~396 882,1221~1222,1224~1225,1292,1
    307~1309,1311,1316~1317,1360~1
    362,1377,1426~1428,1430~1434,1
    450~1457

    protein:H:50~189 1217,1226~1227,1229,1264~1267,
    1309,1327~1329,1450

    protein:I:58~194 976,984~985,988~992,995,1003~1
    006,1012~1015,1066~1068,1084~1
    085,1571,1588,1590

    protein:J:31~138 674,676,755~756,782,825~826,89
    0~895,897,899~901,910~911,924~
    925,927~928,930~931,934,1133~1
    134,1162,1164,1495~1496,1555,1
    557

    protein:K:28~128 1227~1228,1230~1231,1233~1236,
    1248~1250,1254,1265,1309,1318,
    1332,1346~1347,1350,1401~1403,
    1442~1444,1453

    protein:L:63~236 761~764,773,776,780~781,945~94
    8,967~970,1025,1036~1039,1041,
    1051~1052,1149~1151

    protein:M:10~128 685,709,711~713,733~734,742~74
    3,795~796,798,837~841,846,853,
    855~856

    protein:N:4~113 727~728,749~751,766~769,774,77
    7~779,782,931~932

    protein:O:46~239 668,670,865,870~871,880~881,91
    6~919

    protein:P:46~142 965~966,974,1015~1020,1032~103
    3

    protein:Q:2~87 975~977,1015,1019,1589~1592,15
    97~1600

    protein:S:2~136 1114~1115,1119,1126,1280
    protein:T:2~169 683~684,795,855~857,932~933,95
    3,955~956,1131

    protein:U:27~202 698~700,702,710~713,734~735,74
    0~741,844~846

    protein:V:29~407 1522~1530
    protein:X:47~398 1374~1375,1377~1378,1380~1381,
    1383

    protein:Z:3~102 1245~1248,1250~1251,1334~1335,
    1337~1344,1398~1400

    protein:0:4~218 703~707,722,805~808,844,1511,1
    513,1526~1532

    protein:2:2~118 1021~1022,1184,1292~1293,1598~
    1600

    protein:3:128~197 763,937~938,1107,1143,1145~114
    9,1153~1155,1170~1171,1489~149
    0,1542,1553,1575,1581,1583~158
    5,1594

    protein:8:72~262 987~988,997,999~1000,1077~1080
    ,1560~1561,1582

    NAD:A:1701 781~782,948,1046,1048
    SPM:A:1702 945~946,1044,1046,1048,1110
    SRY:A:1703 656,898~899,1167,1555~1556
    MG:A:1704 718~719,791
    MG:A:1705 938~940
    MG:A:1709 1070,1082
    MG:A:1710 1090~1091
    MG:A:1714 1564~1565,1570
    MG:A:1715 1565,1570,1573
    MG:A:1718 947,1045
    MG:A:1719 1305,1318~1319
    MG:A:1720 1238,1345
    MG:A:1722 801,806
    MG:A:1723 815~816
    MG:A:1724 881~882
    MG:A:1727 653~654,664
    MG:A:1728 674,828
    MG:A:1731 758,1146
    MG:A:1739 943,1102
    MG:A:1746 1233~1234
    MG:A:1748 1258~1259,1327
    MG:A:1751 1389,1415
    MG:A:1753 1014~1015
    K:A:1760 702,707~708,842~843
    K:A:1761 717~720,791
    K:A:1762 890,900~901
    K:A:1763 1105~1107,1592~1593
    K:A:1764 1198~1200,1421
    K:A:1765 1199,1361~1362
    K:A:1766 1199~1202
    K:A:1767 1256~1257,1330,1335~1337
    K:A:1768 1258,1263,1328~1329
    K:A:1769 1330~1331,1333~1335
    K:A:1770 1389~1390
    K:A:1771 1175~1177,1476~1477
    K:A:1772 1564~1565,1573,1586
    K:A:1773 1489~1491,1559~1560
    K:A:1774 800~801,803~806
    K:A:1775 835,837~838,850
    K:A:1776 887~889,905
    1627 8qrn:5
    (2.98Å)

    71 N/A URS0000D77905 N/A Homo
    sapiens

    9606
    38969660
    749

    996

    779

    M043_0.6

    1144
    Assembly1
    rna:A:648~1602 30~31,34,38~39,41
    rna:6:1~3 34~37
    protein:7:157~727 71,75~76
    1628 8qrn:A
    (2.98Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    protein:B:53~277 1116,1278~1279,1281,1293~1296
    protein:C:36~167 1264~1266,1302,1308,1319~1320,
    1322~1323

    protein:D:88~430 649~652,659~661,668~669,879,88
    1,904,906,928~929,932,1118,112
    0~1121,1174~1175,1260~1262,127
    8,1283~1287,1322~1326,1334,148
    2

    protein:E:2~123 975,1008~1009,1033~1035,1123~1
    124,1126

    protein:F:35~242 1193~1195,1311,1314~1315,1368~
    1369,1383~1384,1420,1430~1431,
    1434,1457~1462,1464

    protein:G:62~394 1221~1222,1224~1225,1292,1307~
    1309,1311,1316~1317,1361~1362,
    1377,1427~1428,1430~1434,1450~
    1457

    protein:H:50~189 1217,1226~1227,1229,1264~1267,
    1309,1327~1329,1450

    protein:I:58~194 976,984~985,988~992,995,1003~1
    006,1012~1015,1066~1068,1084~1
    085,1571,1588,1590

    protein:J:31~138 674,676,755~756,782,825~826,89
    0~895,897,899~901,910~911,924~
    925,927~928,930~931,934,1133~1
    134,1162,1164,1495~1496,1555,1
    557

    protein:K:28~128 1227~1228,1230~1231,1233~1236,
    1248~1250,1254,1265,1309,1318,
    1332,1346~1347,1350,1401~1403,
    1442~1444,1453

    protein:L:63~236 761~764,773,776,780~781,945~94
    8,967~970,1025,1036~1039,1041,
    1051~1052,1149~1151

    protein:M:10~128 685,709,711~713,733~734,742~74
    3,795~796,798,837~841,846,853,
    855~856

    protein:N:4~113 727~728,749~751,766~769,774,77
    7~779,782,931~932

    protein:O:46~239 668,670,865,870~871,880~881,91
    6~919

    protein:P:46~142 965~966,974,1015~1020,1032~103
    3

    protein:Q:2~87 975~977,1015,1019,1589~1592,15
    97~1600

    protein:S:2~136 1114~1115,1119,1126,1280
    protein:T:2~169 683~684,795,855~857,932~933,95
    3,955~956,1131

    protein:U:27~202 698~700,702,710~713,734~735,74
    0~741,844~846

    protein:V:29~407 1522~1530
    protein:X:47~398 1374~1375,1377~1378,1380~1381,
    1383

    protein:Z:3~102 886,1245~1248,1250~1251,1334~1
    335,1337~1344,1398~1400

    protein:0:4~218 703~707,722,805~808,844,1511,1
    513,1526~1532

    protein:2:2~118 1020~1022,1028~1029,1106,1108,
    1125,1182~1184,1291,1295,1593,
    1596~1597,1599~1601

    protein:3:128~197 763,937~938,1107,1143,1145~114
    9,1153~1155,1170~1171,1489~149
    0,1542,1553,1564,1575,1581,158
    3~1585,1594

    protein:7:157~727 678,695,820~822,824~825,831~83
    2,859,889~892,902,1259,1493~14
    95

    rna:5:1~76 1078,1220,1358~1359,1422~1424,
    1484

    rna:6:1~3 1179,1484~1485,1563,1570
    NAD:A:1701 781~782,948,1046,1048
    SPM:A:1702 945~946,1044~1046,1048,1110
    SRY:A:1703 656,898~899,1165~1167,1555~155
    6

    MG:A:1704 718~719,791
    MG:A:1705 938~940
    MG:A:1709 1070,1082
    MG:A:1710 1090~1091
    MG:A:1713 1564~1565,1570
    MG:A:1714 1565,1570,1573
    MG:A:1717 947,1045
    MG:A:1721 801,806
    MG:A:1722 815~816
    MG:A:1723 881~882
    MG:A:1726 653,664
    MG:A:1727 674,828
    MG:A:1730 758,1146
    MG:A:1738 943,1102
    MG:A:1746 1327~1328
    MG:A:1749 1387~1388
    MG:A:1751 1014~1015
    K:A:1758 702,707~708,842~843
    K:A:1759 717~720,791
    K:A:1760 890,900~901
    K:A:1761 1105~1107,1592~1593
    K:A:1762 1198~1200,1421
    K:A:1763 1198~1199,1361~1362
    K:A:1764 1199~1202
    K:A:1765 1257,1330,1335~1336
    K:A:1766 1263~1264,1328~1329
    K:A:1767 1330,1333~1335
    K:A:1768 1371~1372,1389
    K:A:1769 1175~1177,1476~1477
    K:A:1770 1564~1565,1573,1586
    K:A:1771 1489~1491,1559~1560
    K:A:1772 800~801,805~806
    K:A:1773 835,837~838
    K:A:1774 886~889,905
    1629 8qsj:A
    (3.0Å)

    1418 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000291568F RF02541 Homo
    sapiens

    9606
    38042949
    591

    590

    M269_0.6

    1395

    1328

    1228

    1075

    M055_0.6

    M089_0.6

    175

    1199

    693

    M106_0.6

    1165

    1191

    156

    M161_0.6

    43

    M111_0.6

    1290

    M272_0.6

    M013_0.6

    M081_0.6

    994

    996

    M087_0.6

    1310

    1353

    1334

    s25

    1239

    M350_0.6

    s93

    74

    70

    161

    97

    M043_0.6

    800

    M088_0.6

    1289

    s44

    1364

    1100

    1246

    M019_0.6

    M148_0.6

    M016_0.6

    1385

    s60
    Assembly1
    protein:0:79~188 1817~1819,1821~1822,2306~2308,
    2310,2321~2322,2325,2678~2680,
    2683~2684,2708~2709,2717~2719,
    3102,3212~3213

    protein:1:11~65 2848~2849,2852~2853,2906~2909
    protein:2:47~92 1702,1782~1783,1788~1793,1914,
    1916~1919,1949,1962~1963,1980~
    1981,1999,2339,2428,2500~2501

    protein:3:94~188 1731,1734,1742~1745,1750,1752~
    1754,1872,1890~1892,2044,2090~
    2091,2857,2867,2869~2872,2895~
    2898,2907~2908

    protein:4:66~102 2160,2162,2952~2953,2964~2965,
    3013~3016,3026,3174~3175,3186~
    3189

    protein:5:30~423 1707~1708,1711~1713,1934,2381~
    2384,2389~2391,2393~2395,2406~
    2412,2521~2523,2527

    protein:6:27~380 1882,1891~1892,2062~2063,2071~
    2074,2090,2858~2861,2868~2869

    protein:9:14~137 1701,1703~1705,2338~2339,2341,
    2376~2380,2415~2418,2420~2422

    protein:D:61~300 1922~1926,1939,1974,1982~1984,
    1987~1992,2385,2387~2388,2401~
    2405,2508~2512,2519~2521,2523~
    2532,2536~2538,2737,2739,3083~
    3084

    protein:E:44~348 1955,2233,2458~2462,2474,2477,
    2479,2656~2657,2661,2688,2712~
    2715,2998~2999,3058~3059,3061,
    3065~3067,3105~3108,3146~3148,
    3150,3160,3165~3166,3168,3202~
    3208,3210,3212,3217~3220,3227~
    3228

    protein:F:44~295 1684,1767~1770,1774~1775,1777~
    1778,1782,1792~1795,1869,1878~
    1879,1883~1887,1897~1898,1903,
    1905~1907,2007,2011,2277~2279,
    2288~2290,2292,2298~2302,2722~
    2723,2930~2932

    protein:H:53~149 1730~1732,1734~1735,1746,1755~
    1757,2753~2756,2796

    protein:I:33~197 2103,2111~2112,2137,2153,2168,
    2194,2216~2217

    protein:J:18~157 2170~2172,2174~2175,2187,2190~
    2192,2198

    protein:K:2~178 1824~1825,1835,1838~1840,2234~
    2235,2238~2241,2702~2704,3002

    protein:L:31~145 2468~2473,2651~2652,2658,3035,
    3047~3049,3051,3142,3151~3152

    protein:M:6~296 1723~1724,1741,1743~1744,1749~
    1751,1759~1760,1847,1868,1876~
    1877,1882~1883,1887~1891,1899~
    1901,1903,2015,2017,2019~2021,
    2023,2034~2035,2040~2042,2094~
    2095,2265~2269,2279,2287~2289,
    2293~2294,2868,2897~2899,2916~
    2917

    protein:N:47~251 2070,2073,2102~2105,2109~2111,
    2121,2947,2954~2956,2970~2972

    protein:O:9~162 2320~2321,2325~2327,2452~2458,
    2663,2665,3157~3159,3217~3218

    protein:P:37~180 2874~2875
    protein:Q:72~292 2466~2467,3151~3154,3156~3158,
    3216~3217

    protein:R:10~149 1771,1775,1815~1816,1828~1832,
    1841~1842,1844~1845,1859~1862,
    1864~1865,2144~2149,2244~2249,
    2251,2273~2276,2291~2297,2682~
    2684

    protein:S:45~205 1845~1846,1852~1853,2024~2025,
    2124~2125,2143,2145,2147,2243~
    2244,2255~2257,2261~2263

    protein:T:41~206 1671~1674,1812,1818~1819,1832,
    1834,1957~1958,1961,2146,2305,
    2310,2430~2431,2672~2677

    protein:U:2~153 1695~1696,1705~1706,1780~1781,
    1784~1785,2341~2343,2366,2369~
    2370,2372~2373,2418~2420

    protein:V:13~216 1678,1680~1681,1780,1797~1800,
    1802~1805

    protein:W:43~148 2062~2065,2076~2077,2825~2827,
    2833,2835~2836,2842,2859~2864,
    2872~2873,2888

    protein:X:2~245 1688~1689,1715~1716,1728~1729,
    1735,1746~1748,2742~2743,2745,
    2754~2756,2794~2797,2919

    protein:Y:63~243 1680~1683,1690~1693,1695~1697,
    1699~1700,1705~1709,1711,1765~
    1766,2367~2368

    protein:Z:35~156 2058,2073~2075,2081~2083,2103~
    2104,2118~2122,2137~2140,2253~
    2254

    protein:a:35~142 1820,1822~1824,1834~1836,2706
    protein:b:2~150 1830~1835,2146,2281~2286
    protein:c:31~320 1677,1772~1773,1811~1812,2275,
    2283~2285

    protein:d:37~295 1786,1794,1804,1961,2000,2303,
    2430,2501,2722,2928,3073

    protein:f:48~212 2064~2067,2074,2832
    protein:g:33~166 1875~1876,1878~1883,1893,2050~
    2052,2089

    protein:i:32~128 1675~1676,1678,1685~1686,1722,
    1731~1733,1737~1738,1753,1763~
    1766,1813~1814,1869~1870,1886,
    1901~1903,2009~2011,2093,2278~
    2279

    protein:j:23~112 2148~2150,2247,2254~2258
    protein:l:114~136 2190,2195~2198,2200~2201,2213
    protein:o:9~102 2051~2055,2060,2079~2082,2084,
    2112,2130~2133,2152~2155,2232,
    2236,2281,2287,2689~2693,2943~
    2945

    protein:q:25~165 1736,1759~1760,1762~1764
    protein:r:35~196 2131,2157~2158,2235~2237,2239~
    2242,2244~2245,3180~3181,3189~
    3192

    protein:s:39~433 2325~2328,2334~2335,2345~2346,
    2372~2374,2413~2417,2425,2441~
    2443,2446~2449

    protein:u:91~216 3119~3121,3123
    protein:x:34~383 2818~2819,2844~2845,2848~2849,
    3082

    protein:y:88~331 2517~2518,2750~2751,3081~3083,
    5000,5507~5509,6005~6007

    protein:z:16~326 2487~2490,2636~2637,2647,2649~
    2653,3038,3046

    MG:A:6101 2027~2028
    MG:A:6102 2141,2252~2253
    MG:A:6103 1961,2430
    MG:A:6106 2313,2668
    MG:A:6107 2298,2300
    MG:A:6111 2468~2469
    MG:A:6112 3063~3064
    MG:A:6113 1940~1941,1971
    MG:A:6114 2473~2475,3037
    MG:A:6117 2732~2733
    MG:A:6119 2309,3102
    MG:A:6123 2500,2502~2503
    MG:A:6125 2142,2259
    MG:A:6130 2293~2294
    MG:A:6133 3218~3219
    1630 8qsj:B
    (3.0Å)

    72 GO:0030533 (F) triplet codon-amino aci... URS000219601E RF00005 Homo
    sapiens

    9606
    38042949
    506

    s53

    M348_0.6

    M089_0.6
    Assembly1
    protein:6:27~380 1619~1621,1636~1637,1640,1643,
    1654~1655

    protein:8:95~196 1627~1628,1641,1643
    protein:P:37~180 1620~1624,1626,1638~1644
    protein:e:42~279 1672~1673
    protein:f:48~212 1633~1635
    1631 8qu1:A
    (2.74Å)

    938 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Homo
    sapiens

    9606
    38969660
    591

    1165

    M269_0.6

    156

    1328

    M019_0.6

    1199

    693

    M106_0.6

    1191

    161

    M016_0.6

    1395

    M351_0.6

    M081_0.6

    994

    M087_0.6

    1353

    1334

    1246

    1239

    M350_0.6

    74

    M111_0.6

    M272_0.6

    590

    1187

    M088_0.6

    1289

    s44

    1100

    s25

    1385

    800

    s60
    Assembly1
    protein:D:61~254 2385~2388,2402~2403,2405,2519~
    2521,2524,2527~2532

    protein:E:45~348 2233,2458~2459,2688,2712,2715~
    2716,3105~3108,3146~3150,3160,
    3165~3166,3168,3203~3205,3207,
    3212,3217~3220,3226~3228

    protein:F:45~294 1684~1685,1767,1769~1770,1774~
    1775,1777~1778,1782,1793~1795,
    1869,1878~1879,1883~1887,1897~
    1898,1905~1907,2007,2011,2277~
    2279,2288~2289,2291~2292,2298,
    2300~2301

    protein:H:53~147 1755~1758,2754~2756,2795~2797
    protein:I:30~197 2111,2136~2137,2153,2168,2194,
    2216~2217

    protein:J:18~157 2170~2172,2174~2176,2187,2190~
    2192,2198,2205,2207

    protein:K:2~178 1824~1825,1835,1838~1840,2234~
    2235,2238~2241,2702~2705,3109,
    3183

    protein:L:31~145 2468~2473,3142~3143,3151~3152
    protein:M:10~296 1740~1741,1744,1749,1751,1759,
    1876~1878,1882~1883,1889~1890,
    1899~1901,2269,2279,2287~2289,
    2293,2868

    protein:N:47~251 2102~2105,2110
    protein:O:9~160 2319~2320,2325~2327,2452~2458,
    2665,3157~3159,3217

    protein:P:39~179 2874~2875
    protein:Q:74~290 2466~2467,3151~3152,3154,3156~
    3157,3216~3217

    protein:R:10~149 1771~1772,1775,1816,1827~1831,
    1844,1860~1862,1864~1865,2144~
    2149,2244~2245,2247~2249,2251,
    2273,2275~2276,2292~2296,2682~
    2684

    protein:S:49~204 1845~1846,2143~2145,2147,2243~
    2244,2255~2257,2261~2263

    protein:T:47~212 1671~1674,1811~1812,1818~1819,
    1832~1834,2146,2304~2305,2310,
    2672~2676

    protein:U:2~153 1695~1696,1706,1784,2341~2343,
    2366~2367,2369~2373,2419~2420

    protein:V:15~216 1678~1681,1780,1798~1800,1802~
    1805

    protein:W:48~148 2062~2065,2077,2859~2864,2871~
    2874

    protein:X:2~244 1688~1689,1756~1757,2743,2745,
    2794~2795

    protein:Y:63~238 1681~1683,1690~1691,1693,1696~
    1700,1705~1708,1767~1768,2347,
    2367~2369

    protein:Z:35~154 2058,2074,2081~2082,2103,2118~
    2123,2138~2140,2253

    protein:0:79~186 1817~1819,1821~1822,2306~2308,
    2310,2321~2322,2325~2326,2678~
    2680,2683~2684,2708~2710,3101~
    3102,3212~3213

    protein:1:14~61 2853,2879~2880
    protein:2:55~92 1702,1782~1783,1788~1793,1914,
    1916~1917,2339~2340

    protein:3:94~188 1741~1745,1750,1753~1755,1870~
    1871,1890~1892,2089~2092,2857~
    2858,2868~2871

    protein:5:47~422 1707~1708,2381~2383,2385,2389,
    2391,2393~2395,2405~2413

    protein:6:27~61 2072~2073
    1632 8qu1:B
    (2.74Å)

    56 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens

    9606
    38969660
    506

    s53

    M348_0.6
    Assembly1
    protein:P:39~179 1622~1626,1640~1644
    protein:6:27~61 1625,1636~1638
    1633 8qu5:A
    (2.42Å)

    1049 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Homo
    sapiens

    9606
    38969660
    591

    1165

    M269_0.6

    156

    1328

    M019_0.6

    1199

    693

    M106_0.6

    1191

    43

    161

    1395

    M272_0.6

    M081_0.6

    994

    M087_0.6

    1353

    1334

    1246

    s17

    1239

    M350_0.6

    74

    91

    M111_0.6

    M016_0.6

    590

    1187

    M088_0.6

    1289

    s44

    1100

    s25

    1385

    800

    s60
    Assembly1
    protein:0:79~186 1817~1819,1821~1822,2306~2308,
    2310,2321~2322,2678~2680,2683~
    2684,2708~2710,2717~2718,3101~
    3102,3212~3213

    protein:1:14~65 2849,2852~2853,2855,2880,2906~
    2909

    protein:2:50~92 1699,1701~1702,1782~1783,1788~
    1793,1914,1916~1919,2339,2428~
    2429

    protein:3:94~188 1731,1741~1745,1750,1752~1754,
    1870,1890~1892,2044,2090~2091,
    2857~2858,2867~2871,2895~2898,
    2908~2909

    protein:F:45~294 1684~1685,1767~1770,1774,1777~
    1778,1782,1792~1795,1867,1869,
    1879,1883~1887,1897~1898,1903~
    1907,2007,2011,2277~2279,2288~
    2292,2298~2301,2930~2932

    protein:H:53~147 1716,1718,1730~1732,1746~1747,
    1755~1756,2753~2754,2795~2796

    protein:J:18~157 2169~2172,2174~2176,2187,2190~
    2192,2198,2207

    protein:K:2~178 1825,1838~1839,2234~2235,2237~
    2241,2703~2705,3109,3183

    protein:L:31~145 2469~2471,2473,2658,3141~3142,
    3151~3152

    protein:M:10~296 1723~1724,1740~1741,1743~1744,
    1749~1751,1760,1847~1848,1868,
    1876~1878,1882~1883,1889~1890,
    1899~1901,1903,2015~2016,2019~
    2023,2034~2035,2040~2042,2094~
    2095,2265~2269,2279,2287~2289,
    2293~2294,2868,2897~2899,2916~
    2917

    protein:N:47~251 2073,2102~2110,2121,2814~2816,
    2839~2842

    protein:O:9~160 2319~2320,2326~2327,2452~2458,
    2665,3157~3159,3217~3218

    protein:P:39~179 2874~2875
    protein:Q:74~290 2466,3151~3152,3154,3156~3158,
    3217

    protein:R:10~149 1771~1772,1775,1815~1816,1827~
    1831,1844,1861~1862,1864~1865,
    2144~2149,2244,2247~2249,2251,
    2273~2276,2291~2296,2682~2684

    protein:S:49~204 1845~1846,2024~2025,2125~2126,
    2143~2145,2147,2243~2244,2256~
    2257,2261~2263

    protein:W:40~148 2063~2065,2077,2825~2826,2833~
    2836,2841~2842,2859~2865,2871~
    2874,2889,2892

    protein:X:2~244 1688~1689,1715~1716,1728~1729,
    1746~1748,2744~2745,2754~2755,
    2795~2797,2919

    protein:Y:63~238 1680~1683,1689~1691,1693,1696~
    1697,1699~1700,1705~1708,1712,
    1768,2367~2369

    protein:Z:35~154 2058,2073~2075,2081~2082,2103~
    2104,2118~2122,2136~2140,2253~
    2254

    protein:b:2~149 1830~1835,1837,2146,2281~2286
    protein:g:38~166 1875~1876,1880~1883,1893,2050~
    2053,2089

    protein:i:32~128 1675~1678,1685~1686,1722,1731~
    1732,1737~1738,1753,1768,1813~
    1814,1869~1870,1886,1902~1903,
    2009~2011,2013,2092~2093,2278~
    2279

    protein:j:24~108 2083,2148~2150,2247,2254~2257
    protein:l:114~136 2189~2198,2200,2213~2214
    protein:o:24~102 1878,2051~2055,2060,2079~2082,
    2084~2085,2152~2155,2287

    protein:u:91~201 3118,3120,3123
    protein:5:31~422 1707~1708,1712~1713,2381~2382,
    2384~2385,2389~2391,2393~2396,
    2405~2413,2521~2523,2527

    protein:6:27~380 1882,1891~1892,2063,2072,2089~
    2090,2832,2858~2861,2868~2869

    protein:9:15~137 1701,1704~1705,1790,2338~2339,
    2341,2376~2380,2415~2416,2418,
    2420~2422

    protein:D:61~296 2385~2388,2401~2404,2509~2511,
    2519~2521,2523~2525,2527~2531

    protein:E:45~348 2233,2458~2459,2660,2662,2687~
    2688,2712,2715,3105~3108,3146~
    3150,3160,3165~3166,3168,3202~
    3207,3212,3217~3220,3227~3228

    protein:I:30~197 2110~2111,2136~2137,2153,2168,
    2194,2216~2217

    protein:T:47~212 1671~1674,1812,1818~1819,1832~
    1834,2146,2304~2305,2310,2672~
    2676

    protein:U:2~153 1695,1706,1781,1784,2341~2343,
    2366~2367,2369~2373,2418~2420

    protein:V:15~216 1678~1681,1780,1798~1800,1802~
    1805

    protein:a:35~142 1820,1822~1824,1834~1836,2706
    protein:c:31~316 1677,1771~1773,1811~1812,2275,
    2283~2284

    protein:d:50~294 1804,2347~2349
    protein:f:48~190 2064~2067,2074,2831~2832
    protein:r:35~196 2131,2157~2158,2235~2237,2240~
    2245,3180~3182,3189~3192

    protein:s:41~430 2324~2328,2334~2335,2345,2372~
    2375,2409,2413~2414,2416~2417,
    2425,2441~2443,2445~2449

    MG:A:3302 2864,2866
    MG:A:3303 1723,1725~1726
    MG:A:3304 1775~1776
    MG:A:3305 1814~1815
    MG:A:3307 1917~1918
    MG:A:3310 2141,2252~2253
    MG:A:3312 2317,2451~2452
    MG:A:3314 2313,2668
    MG:A:3315 2297~2298,2300
    MG:A:3321 2468~2469
    MG:A:3324 2732~2733
    MG:A:3325 2309,3102
    MG:A:3326 2036,2917~2918
    MG:A:3331 2015,2039~2040
    MG:A:3332 2036,2914~2915,2917
    MG:A:3333 2035,2915~2917
    MG:A:3336 2293~2294
    MG:A:3338 1778~1779
    MG:A:3344 2375~2376
    1634 8qu5:B
    (2.42Å)

    56 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens

    9606
    38969660
    506

    s53

    M348_0.6
    Assembly1
    protein:8:83~181 1627~1629,1642~1643
    protein:P:39~179 1623~1626,1640~1641,1643~1644
    protein:6:27~380 1625,1636~1638,1641
    protein:f:48~190 1633~1635
    1635 8qxd:2
    (9.6Å)

    97 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    N/A RF00004 Homo
    sapiens

    9606
    38778104
    504
    Assembly1
    rna:6:31~106 3~12
    rna:Z:29~43 32~44
    protein:8:42~209 39,41
    protein:B1:394~1304 30~31,34,56
    protein:B6:12~101 29,32
    protein:22:13~115 98,104~105
    protein:2B:3~94 162~163,165~167,170
    protein:2f:4~75 99,106~107
    protein:2b:6~87 102~103
    protein:23:2~84 101,150~151,181~182
    protein:2g:4~76 100~101
    protein:2e:11~91 99,106
    protein:21:1~80 103,105
    1636 8qxd:4
    (9.6Å)

    124 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00015 Homo
    sapiens

    9606
    38778104
    750

    780

    583

    993
    Assembly1
    rna:6:31~106 1~17,21,55~64,66~68,73~78
    protein:M:6~128 30~32
    protein:R:369~474 68~70,73
    protein:S:550~774 65,67
    protein:L:59~390 32,39~40,58
    protein:41:2~82 85,123,125
    protein:4e:14~89 119,126
    protein:42:22~113 118,124~125,127~128
    protein:4f:4~75 118~119,125~126,144
    protein:4b:8~89 122,138
    protein:4g:3~76 120~121
    1637 8qxd:5
    (9.6Å)

    104 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    38778104
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390
    Assembly1
    protein:A:58~2335 11~12,17~20,23,26~29,45,48,55
    protein:51:1~82 92,109
    protein:52:20~116 87,93~94,96~97
    protein:5f:2~75 88,95~96,117
    1638 8qxd:6
    (9.6Å)

    53 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000035C796 RF00026 Homo
    sapiens

    9606
    38778104
    1334

    s59

    M021_0.6
    Assembly1
    rna:2:3~184 86~88,90~95
    rna:4:1~144 31~36,47,49~75
    protein:J:385~683 56~57,75~77
    protein:L:59~390 54~55
    protein:63:14~98 105~106
    protein:68:2~96 103~104,106
    1639 8qyx:A2
    (1.78Å)

    3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02543
    RF02541
    Homo
    sapiens

    9606
    39658079
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    1375

    s52

    s50

    931

    M272_0.6

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    546

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800

    1368
    Assembly1
    protein:A1:24~248 717~718,726~730,940~944,962~96
    4,974~976,1088~1090,1208,1210,
    1213,1238~1239,1271~1273,1699,
    1704~1706,1717~1718,1723~1728,
    1839~1841,1876~1877,1895~1897,
    1905~1908,2072~2073,2083,2093,
    2096~2097,2099,2254~2255,2274~
    2276

    protein:B1:26~263 5~6,119,121~122,143,147~151,24
    72,3940~3941,4075~4076,4085~40
    88,4116~4117,4125~4129,4157,41
    61~4165

    protein:C1:1~190 759,1950~1951,4475~4479,4602~4
    604,4610,4612~4613,4686~4693,4
    700~4702,4704,4764~4765

    protein:D1:2~214 1748,1750~1751,1780,1783~1789,
    1863~1867,2033,4194~4195,4199~
    4200,4212,4221,4223~4225,4405,
    4413,4415,4429~4432,4441~4442

    protein:E1:8~178 4241,4248~4251,4253~4254,4256~
    4261,4280

    protein:F1:2~208 46~49,64~65,71~76,80,85,95~97,
    101~103,105~107,109,159,170,17
    3~174,185,258,325,337~338,511,
    518,1343~1344,1360~1364,1371,1
    378,1382,1394~1396,1482,1485~1
    488,1513~1516,1518,1683,1850,4
    357~4359

    protein:G1:2~137 735~736,739,748,917~920,935~93
    7,1921,1923~1925,4764~4765,486
    8~4872,4877,4879~4882,4893~489
    4,4928~4929

    protein:H1:2~204 8~9,18~19,27~32,34~35,43~44,48
    ~49,54~55,57,61~63,65,67~68,76
    ,78~79,81,98~99,113~116,124~12
    5,147,150~153,278~280,287~288,
    291~293,297~303,305,308,313,31
    5,330~333,338,1341~1342,1359~1
    360,1372,1625~1626,2457~2461,3
    669~3671,3673,3926,3928~3929,3
    937~3938,4077~4078,4175,4177,4
    186~4187

    protein:I1:3~203 432,1308~1309,1912~1915,1928~1
    930,1932,2044~2046,2051~2057,3
    869,3886~3888,4564~4565,4583~4
    587,4681,4683,4702,4711~4713,4
    757~4761,4763,4768~4769,4860,4
    872~4873,4893,4909~4911

    protein:J1:2~161 393,397~400,409,422~425,1596~1
    597,1600,2360~2362,2419~2422,2
    794~2795,3855~3861,3891~3893,4
    568~4569,4969~4971,4980~4982,5
    066

    protein:K1:2~188 86~88,1345~1355,1389,1391,1420
    ,1427~1430,1456~1461,1495~1499
    ,1501~1504,1666~1667,1689~1693
    ,1847,1897~1898,2072,2081~2084
    ,2087~2088,2268~2269,2277,4299
    ,4306~4307,4339~4341,4365~4367

    protein:L1:2~162 1549~1550,1557~1558,1570~1574,
    2385~2388,2525~2527,2607~2608,
    2615~2616,2633~2635,2660~2661,
    2663~2669,2708~2709,2711,2725,
    2808~2809,2812,2819~2823,2863~
    2865,2887~2891,2896~2899,3595~
    3597,3605,3607~3608,3619,4645~
    4648

    protein:M1:2~176 729,731~733,748~749,939,1919,1
    921~1922,1925~1926,1950~1953,2
    033~2035,2055,2059~2063,4763~4
    765,4870~4871,4874~4876

    protein:N1:2~160 1088~1090,1730~1733,1790~1791,
    1799~1800,1802~1803,1808,1834~
    1837,4207~4209,4212,4217~4218,
    4220,4275~4278,4282,4299~4302,
    4304~4305,4310~4315,4327,4332~
    4334

    protein:O1:17~117 2620~2623,2626,2630~2632,2702~
    2703

    protein:P1:10~140 2846~2848,2850,3798~3799,3842~
    3843,4457,4493~4494,4507~4510,
    4617~4621,4629,4670~4673

    protein:Q1:1~62 3615,3617,4628~4630,5004~5006,
    5038,5041

    protein:R1:38~156 2,11~17,2434~2438,2472~2475,25
    04,2532~2534,2778~2781,4084~40
    86

    protein:S1:1~134 194~196,198~200,208~210,226~23
    2,235,238~240,242~243,246,346~
    347,386~387,389,404~405,1368

    protein:T1:2~136 2573~2582,2655~2656,2753~2756,
    2760,4122~4123,4128~4129,4148~
    4149

    protein:U1:2~148 37~39,69~70,86~89,93~95,101,29
    4,315~316,508~510,1317~1319,13
    38~1340,1387,1391~1392,1396~13
    98,1419,1468,1489,1499~1500,15
    02,1509~1512,1515~1516,1518~15
    19,1652~1656,1659~1661,1675,16
    81~1684,1852,2282~2285,2287,23
    40~2342,2344~2345,4304,4340~43
    42,4354,4363~4365,4376~4377

    protein:V1:2~122 1214,1239,1241~1243,1265~1268,
    1270~1271,1273,1410,1423~1424,
    1462~1466,1492~1493,1669~1672,
    1685~1687,1706~1707,1724,1800,
    1805,1811~1817,1825~1826,1828~
    1831,1844,1855,1873~1878,4195,
    4218~4220,4298~4299,4314~4315

    protein:W1:9~106 2658,2660,2673~2675,4120
    protein:X1:16~124 2369~2370,2372~2374,2389~2390,
    2832,4634~4637,4653~4654,4658,
    4995~4998,5045~5046,5048,5056~
    5058

    protein:Y1:2~131 434~439,449,454~455,957~958,13
    02,1311~1313,1315~1317,1322,13
    32,1661~1664,1882~1885,1898~19
    00,2077~2079,2279,2302~2306,23
    16~2322,2324~2326,2347

    protein:Z1:2~110 438~443,709,951~953,1297~1298,
    1308~1310,1885~1887,1903~1905,
    1915~1919,2065~2069,4749~4754,
    4943~4946

    protein:a1:2~115 2395,2397,2399~2403,2441,2513~
    2519,2521~2522,2530,2582~2584,
    2587,2596~2599,2601,2612~2614,
    2638~2641,2652~2653,2683,2685,
    2687,2698,2747~2752,2769~2770,
    2783,2802~2807,4120~4123

    protein:b1:2~123 16~17,19,111~112,133,135~138,1
    55~156,173,265,267

    protein:c1:2~103 72,158~160,276~277,282~284,304
    ~310,312,319~320,325~327,1481,
    3720,3725,3728

    protein:d1:2~87 21~24,52,54~55,250,342~343,358
    ,364,370~375,1529~1530,1532~15
    36,1601~1602,1617~1618,1620~16
    21,1637~1639,1646~1647,2404~24
    06,2792~2793,2799~2801,3642~36
    43

    protein:e1:2~70 2536~2538,2643,2692~2693,2695~
    2696,2772~2774

    protein:f1:2~51 361~362,413,2404~2409,2428~242
    9,2431,2512,2781~2783,2789~279
    2,2796

    protein:g1:77~128 1929,1946~1947,2037~2038,4423~
    4425,4472~4475,4484~4485,4685~
    4687,4695,4697~4699

    protein:i1:2~104 43,90~91,288~289,294~295,3925~
    3927,4229~4233,4290~4291,4293~
    4295,4318~4319,4330~4331,4338,
    4342~4347,4362~4363,4368~4370,
    4372~4373,4379~4380

    protein:j1:2~92 1553~1555,1567,1569,1573,1575~
    1577,2652,2671~2672,2674,2737~
    2739,2741,2874~2876,3635,3692~
    3694,4121

    protein:k1:2~126 458,478~480,667,669~670,677~67
    9,690,2090,2260~2269,2289,2298
    ,2337~2338

    protein:D2:2~247 1538~1542,1577,1613,1622,1627~
    1631,1633,1642,2448,2503,2594~
    2595,2739~2741,2743,3650~3654,
    3656~3662,3666~3668,3675~3685,
    3687~3691,3698,3705~3707,3744~
    3750,3818,3919,3928,4083~4084,
    4086~4088,4117~4118,4120~4121,
    4124~4125,4182,4184~4185,4537~
    4539,4543~4546

    protein:E2:2~397 1591,1593,1595,2044,2835~2838,
    2854,2856~2857,3842,3844~3845,
    3870~3871,3894~3899,4455~4460,
    4492~4493,4515~4518,4520~4521,
    4523~4527,4558,4564~4569,4578~
    4582,4587~4589,4615~4617,4622~
    4627,4664~4665,4667~4668,4674~
    4677,4714~4718,4723~4728,4909~
    4912,4966~4969,4974,4976~4979,
    4981~4982,4984~4989,4994,5000~
    5003,5041~5043,5047,5049~5051,
    5061,5063

    protein:F2:4~362 219,222~226,228,243,340,347~35
    2,354~355,357~358,366~368,374~
    377,491,654~655,715~716,723~72
    5,930,943,945~947,957,974~977,
    1279~1281,1283,1335~1341,1350~
    1351,1357~1359,1366,1370~1377,
    1506~1508,1517,1519~1522,1645~
    1646,1650,1700~1703,2076,2086~
    2090,2096,2273~2275,2294~2301,
    2334,2338~2341,2343,2349~2353,
    3905~3906,4391

    protein:G2:2~294 1175~1179,1186~1187,1742~1743,
    1754~1755,1778~1779,1817~1820,
    1824,4239,4264~4265,4279~4280,
    4282,4323,4325~4326

    protein:H2:42~288 457~459,469~470,684~689,691,71
    0~713,958~961,968,970,972,977~
    982,1067~1072,1237~1240,1273,1
    279~1281,1284,1286~1291,2258~2
    261,4754~4755,4883~4884,4930~4
    932,4936,4938~4943,4945

    rna:B2:1~119 1736~1738,1741,1792~1796,1894,
    1909,1936,1942

    rna:C2:1~156 1~22,58,146,339,341~348,350~35
    3,355~357,360,362,379~380,409,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2488,2494,25
    08,2544~2545,2778~2780,3890

    PUT:A2:5401 3917~3919,4190,4382~4383
    PUT:A2:5402 1647,1649~1650
    PUT:A2:5403 1680~1681,1853
    PUT:A2:5404 370~371,1532,1637,1639,1644
    PUT:A2:5405 1869,3875
    SPD:A2:5406 436,1305~1307
    SPD:A2:5407 48,289~291
    SPD:A2:5408 39~40,91~93,4340
    SPD:A2:5409 329~332
    SPD:A2:5410 1666,1688~1689
    SPD:A2:5411 2614,2808~2811
    SPD:A2:5412 1914,2050~2051,3885~3886
    SPM:A2:5413 45,47~48,291,293~294
    SPM:A2:5414 1734~1735,1787~1788,1790~1791
    SPM:A2:5415 1527~1528,1625,3918,4186~4187
    SPM:A2:5416 1587,1604~1605,3642~3643
    SPM:A2:5417 1582~1585,1607~1609
    ATP:A2:5418 4341~4342,4370~4372
    K:A2:5419 423~424
    K:A2:5420 1885~1886
    K:A2:5421 3651~3652,3691
    K:A2:5422 3701,3704~3705,3745
    K:A2:5423 3701~3704,3746
    K:A2:5424 3689,3747~3749,3817~3818
    K:A2:5425 3907,4393,4446~4447
    K:A2:5426 4320~4322,4326
    K:A2:5427 1683,1852~1853
    K:A2:5428 1685,1851~1852
    K:A2:5429 1542~1543,1616~1617
    K:A2:5430 1624~1625,1642~1643
    K:A2:5431 4182~4185
    K:A2:5432 1578~1579,1609~1610,3637~3638
    K:A2:5433 3873~3875
    K:A2:5434 4631~4632,4666~4667
    K:A2:5435 3854,3893~3894
    K:A2:5436 2639~2640,2691,2693
    K:A2:5437 1390~1392,1470~1471
    K:A2:5438 410,415~416,2331
    K:A2:5439 33,1527~1528
    K:A2:5440 43~45
    K:A2:5441 1355~1357,1382~1384
    K:A2:5442 1317~1318,1657
    K:A2:5443 3647,3827~3829
    K:A2:5444 4212~4213
    K:A2:5445 4493,4508,4512
    K:A2:5446 409~410,2330
    K:A2:5447 3929~3930,4180~4182
    K:A2:5448 4443~4446
    K:A2:5449 3854~3855,4980~4981
    K:A2:5450 3690,3818~3819
    K:A2:5451 3777,3815~3816,3818
    K:A2:5452 4450,4518
    K:A2:5453 2415~2416,2425~2426
    K:A2:5454 1339,1516,1518~1519
    K:A2:5455 15~16
    K:A2:5456 4235,4283,4332
    K:A2:5457 4235~4236,4328~4331
    K:A2:5458 1327~1329
    K:A2:5459 4689~4690,4697~4698
    K:A2:5460 4631~4633,4664
    K:D2:302 1539,1630
    MG:A2:5469 41,3916
    MG:A2:5470 1667,2280
    MG:A2:5487 4193~4194
    MG:A2:5490 85,1384
    MG:A2:5492 3642,3644~3645
    MG:A2:5493 2279~2280
    MG:A2:5501 2363~2364
    MG:A2:5502 112,156
    MG:A2:5509 2422~2423
    MG:A2:5512 2393~2394,2819
    MG:A2:5513 4528~4529
    MG:A2:5514 2453,2466
    MG:A2:5517 369,2793
    MG:A2:5519 2783~2784
    MG:A2:5521 1381~1382
    MG:A2:5533 14~15
    MG:A2:5535 38,40~41
    MG:A2:5543 356,359
    MG:A2:5544 415~417
    MG:A2:5546 1633,4534
    MG:A2:5547 1632~1633,4535
    MG:A2:5548 1659,2348
    MG:A2:5550 1523,1651
    MG:A2:5551 3907,4448
    MG:A2:5552 1327,4450
    MG:A2:5553 3902,4451
    MG:A2:5554 4522~4523
    MG:A2:5555 4519~4521
    MG:A2:5557 4451,4522
    MG:A2:5558 1325,3879
    MG:A2:5559 1317,1322
    MG:A2:5562 1854~1855
    MG:A2:5563 3907~3908
    MG:A2:5565 1321,4394,4445
    MG:A2:5566 4394,4444~4445
    MG:A2:5569 1850,2284
    MG:A2:5576 1888~1889
    MG:A2:5577 1916~1917
    MG:A2:5578 1578~1579,1610
    MG:A2:5579 1580,1610
    MG:A2:5581 1588,3645~3646
    MG:A2:5583 3692~3693
    MG:A2:5585 1675,4375~4377
    MG:A2:5586 4214~4215
    MG:A2:5588 2392,2819
    MG:A2:5591 1337,2344
    MG:A2:5592 2528~2529,2784
    MG:A2:5593 2410~2411,2428
    MG:A2:5594 2826,2830
    MG:A2:5595 2438,2782
    MG:A2:5596 1600,2794
    MG:A2:5599 956~958
    MG:A2:5600 1592,4526
    MG:A2:5601 1636,1639
    MG:A2:5605 2363,3853
    MG:A2:5606 2514,2516
    MG:A2:5609 2789,2828
    MG:A2:5611 2850~2852,4496
    MG:A2:5612 2851~2852
    MG:A2:5613 2854,4498
    MG:A2:5614 3833,4497
    MG:A2:5618 3782,3787
    MG:A2:5621 3863,3904
    MG:A2:5625 4490,4589
    MG:A2:5627 1676,4377~4378
    MG:A2:5629 4670,4673
    MG:A2:5631 1641~1642,3917~3918
    1640 8qyx:B2
    (1.78Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Homo
    sapiens

    9606
    39658079
    931

    1290

    s51

    879
    Assembly1
    protein:A1:24~248 82~83,85,95~97
    protein:D1:2~214 63~64,89~91,105~106
    protein:E1:8~178 17,27~29,39~40,42~44,51~52,54~
    56

    protein:M1:2~176 74~75,86~87,93~99
    protein:N1:2~160 8~10
    protein:G2:2~294 5~8,10~11,13~15,22,26~28,33~36
    ,44~50,59~61,63,65~67,107~110,
    113~119

    rna:A2:1~5069 77~80,84,88,98,100~101,103
    PUT:B2:201 79~80,96~97
    1641 8qyx:C2
    (1.78Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Homo
    sapiens

    9606
    39658079
    1227

    592

    M106_0.6

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589
    Assembly1
    protein:B1:26~263 148~155
    protein:F1:2~208 29~31
    protein:H1:2~204 139~143
    protein:J1:2~161 3~5,11~14
    protein:R1:38~156 59~60,98,130~136,146~148
    protein:S1:1~134 22~24,70~75,83~84,87,89~91
    protein:b1:2~123 36~38,49~50,60,62~65,78,86~87,
    95~97

    protein:d1:2~87 32,34~36,40~43,57~58,67,93~95,
    99,101~104,109

    protein:f1:2~51 45~46,50~53,75,111
    protein:F2:4~362 21~22,26~27
    rna:A2:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,123~127,136,138~149,1
    51~156

    K:A2:5419 9~11
    1642 8qzs:2
    (4.1Å)

    98 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS0000E60B66 RF00004 Homo
    sapiens

    9606
    38778104
    504
    Assembly1
    rna:6:36~105 3~12,14
    rna:Z:29~43 33~44
    protein:B1:394~1304 30~31,34,36,56
    protein:B6:12~101 29,32
    protein:22:13~115 98,104~105
    protein:2B:3~94 162~167,170
    protein:2f:4~75 98~99,106~107
    protein:2b:6~87 102~103
    protein:23:2~84 101,150~151,168,181~182
    protein:2g:4~76 100~101
    protein:2e:11~91 99,106
    protein:21:1~80 103,105
    1643 8qzs:4
    (4.1Å)

    136 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00003F07BD RF00015 Homo
    sapiens

    9606
    38778104
    995

    1368
    Assembly1
    protein:B:433~2125 69~74,76~77,83
    protein:M:5~128 30~32
    protein:7:160~489 23~24
    protein:42:26~114 118,125~128,144
    protein:4f:4~74 119~120,126
    protein:4e:15~92 120~121,141
    protein:4g:4~76 121~122,139
    protein:43:4~74 123,138
    protein:L:52~432 20,32,39,41,53
    protein:N:8~941 19,40~41,49,54
    rna:6:36~105 1~18,21~22,55~61
    1644 8qzs:5
    (4.1Å)

    109 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Homo
    sapiens

    9606
    38778104
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390
    Assembly1
    protein:A:56~2317 11~12,17~19,23,26~29,44~45,48,
    54~56

    protein:5e:14~90 88,95,116~117
    protein:53:1~84 89~90
    protein:5f:3~75 87~88,93~96,117
    protein:51:2~82 91~92,94,109~110
    protein:5b:6~88 78,91~92,111
    protein:52:10~116 85,87,93~94,96
    protein:5g:3~76 89~90
    rna:z1:-3~8 40~43
    1645 8qzs:6
    (4.1Å)

    59 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Homo
    sapiens

    9606
    38778104
    1334

    s59

    M021_0.6
    Assembly1
    protein:A:56~2317 40~45
    protein:X:3~82 45~46,48
    protein:62:1~90 103~104
    protein:J:436~683 55~56,66~67,77~78
    protein:L:52~432 49,52,54~55
    rna:2:3~184 85~95
    rna:4:1~144 51~75
    rna:z1:-3~8 40~43,46
    rna:z2:-3~1 36~39
    1646 8r08:1
    (6.1Å)

    153 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP
    N/A RF00003 Homo
    sapiens

    9606
    38778104
    121

    M319_0.6

    1184

    1202

    518

    509

    1031

    760
    Assembly1
    protein:1f:2~75 126,133
    protein:11:2~82 130,135~136,164
    protein:1b:6~91 129,140
    protein:1g:4~76 127~128
    protein:1e:14~90 126,133
    protein:12:10~114 123,125,131~132,135~136
    protein:1K:2~202 30~33,135,137
    1647 8r08:2
    (6.1Å)

    97 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    N/A RF00004 Homo
    sapiens

    9606
    38778104
    504
    Assembly1
    rna:Z:29~43 33~44
    rna:6:31~106 3~13
    protein:B1:394~1304 30~31,34,56
    protein:B6:12~101 29,32
    protein:22:13~115 98,104~105
    protein:2B:3~94 163,165~167,170
    protein:2f:4~75 99,106~107
    protein:2b:6~87 102~103,181
    protein:23:2~84 101,150~151,181~182
    protein:2g:4~76 100~101
    protein:2e:11~91 99,106
    protein:21:1~80 97,103,105
    1648 8r08:4
    (6.1Å)

    124 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00015 Homo
    sapiens

    9606
    38778104
    750

    780

    583

    993
    Assembly1
    protein:M:6~128 5~6,30~32,43
    protein:R:369~474 68~70,73
    protein:L:59~390 17~18,35~37,39~43,57~58
    protein:S:550~774 65,67~68
    protein:41:2~82 85,123,125
    protein:4e:14~89 119,126
    protein:42:22~113 118,124~125,127~128
    protein:4f:4~75 118~119,125~126,144
    protein:4b:8~89 86,122
    protein:4g:3~76 120~121
    rna:6:31~106 1~17,55~64,66~68,73~80
    1649 8r08:5
    (6.1Å)

    104 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    38778104
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390
    Assembly1
    protein:A:58~2335 12,17,19~20,23~24,26~29,45,48
    protein:5b:4~89 91~92
    protein:51:1~82 92,109
    protein:52:20~116 87,93~94,96~97,101
    protein:5f:2~75 88,95~96,117
    1650 8r08:6
    (6.1Å)

    53 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000035C796 RF00026 Homo
    sapiens

    9606
    38778104
    1334

    s59

    M021_0.6
    Assembly1
    protein:M:6~128 71~72
    protein:R:369~474 36,48~49
    protein:J:385~683 56~57,59,76~77
    protein:L:59~390 54~55
    protein:63:14~98 105~106
    protein:68:2~96 103~104,106
    rna:2:3~184 86~88,90~95
    rna:4:1~144 31~36,47,49~75
    << < 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 > >>
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
  • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218