SEQ2FUN

FURNA
Download all results in tab-seperated text for 19236 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1301 2dxi:C
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly1
    protein:A:1~468 503,505,511~514,524~525,534~53
    9,569~571,574~576
    1302 2dxi:D
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly2
    protein:B:1~468 503~506,511~513,524~525,534~53
    8,569~570,574~576
    1303 2e2h:R
    (3.95Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    dna:T:1~28 3~4,6~10
    protein:A:2~1445 1,10
    protein:B:20~1223 2,8~10
    1304 2e2i:R
    (3.41Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    dna:T:1~28 3~6,8~10
    protein:A:3~1449 1~2,10
    protein:B:20~1224 6,8~10
    1305 2e5l:A
    (3.3Å)
    		 1517 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E378 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 17355865 Assembly1
    rna:1:1~6 1538~1543
    rna:2:7~10 723,1533,1537~1538
    protein:B:7~228 829,1073~1075,1099~1104,1111
    protein:C:2~207 421,532,1055~1058,1060~1061,11
    07~1109,1111~1113,1189~1191,12
    05~1206,1256
    protein:D:2~209 8,400~413,426~430,436~438,489~
    490,499,508~509,511~512,541~54
    7,616,619~620
    protein:E:5~154 5~9,15~16,18~20,559,864,921~92
    2,1069~1070,1072~1074,1078~108
    1,1396~1398
    protein:F:1~101 670~671,673~674,710~711,736~73
    8
    protein:G:2~156 932~933,935,939~940,1092,1173,
    1239~1241,1290~1292,1297~1298,
    1346,1350~1351,1373~1380
    protein:H:1~138 4,564,586~587,590~591,597~600,
    632,640~643,653,755,823~828,86
    0~861,874~878
    protein:I:2~128 966~968,1117~1119,1127~1131,11
    47~1149,1178~1180,1186~1188,12
    31~1233,1248~1252,1291~1292,13
    42~1344,1346~1351,1366~1373
    protein:J:3~100 963~964,972~973,975,1059~1061,
    1123~1125,1150~1153,1189,1198~
    1199,1254~1255,1278~1280,1366~
    1368
    protein:K:11~125 675~677,683~692,694~695,704,70
    6~708,716,718,778~780,1523
    protein:L:5~128 24,33~37,49,241,362~363,501~50
    3,518~523,526,528~529,537~539,
    552~553,556,562,564,567~568,58
    5,880~881,909~913,1491
    protein:M:2~123 946~953,1225~1229,1295,1297,13
    02,1306~1310,1321,1328~1330
    protein:N:2~61 973~976,979~983,1047~1049,1060
    ,1114~1115,1186~1189,1202~1203
    ,1216~1219,1316~1317,1358~1359
    ,1368~1369
    protein:O:2~89 579,583,656~660,667~669,728,73
    9~741,750~755,764,807~808
    protein:P:1~83 43~44,110,112,134~137,228~230,
    309~311,375~377,389~393,449~45
    0,452,454,462~463,474,608,617,
    624~627
    protein:Q:2~105 127~130,190E,234~238,246~247,2
    53~256,264~267,275~280,564,584
    ,586,760,762
    protein:R:16~88 663~664,674,718~720,734~736,83
    5
    protein:S:2~81 957~958,986,1014,1219~1227,131
    0~1314,1318~1321
    protein:T:8~106 56,61,103~105,107~108,132,175~
    177,185~188,190L,191~195,222~2
    23,259~263,323~324,333,1436,14
    38~1439,1455,1459~1460
    protein:V:2~25 1235~1236,1242~1244,1267,1269,
    1286,1304~1305,1325~1329,1352
    1306 2ees:A
    (1.75Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DE3D RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39,66
    NCO:A:101 66~67
    NCO:A:102 38,56
    NCO:A:103 39,55~56,68~69
    NCO:A:104 30~32,66
    NCO:A:105 37~38,57
    NCO:A:107 41,53~54
    NCO:A:108 47,50
    NCO:A:109 24,71
    NCO:A:111 32~33
    HPA:A:90 21~22,47,51~52,74~75
    1307 2eet:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DDBB RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 47,50~51
    NCO:A:111 32~33
    HPA:A:90 21~22,47,51~52,74~75
    1308 2eeu:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E2FB RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 28,66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 31~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 46~47
    NCO:A:109 24,71
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    1309 2eev:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DFC6 RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:95 32~33,38
    NCO:A:101 28,66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:106 26~27
    NCO:A:107 41,53~54
    NCO:A:108 46~47
    NCO:A:109 24,71
    NCO:A:110 21~22
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    1310 2eew:A
    (2.25Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E008 RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38,66
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 31~32,66
    NCO:A:105 37~38
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    1311 2es5:A

    		 23 N/A URS000080E2B5 N/A synthetic
    construct
    32630    		 16429156
    1312 2ese:B

    		 23 N/A URS000080E2B5 N/A synthetic
    construct
    32630    		 16429156 Assembly1
    protein:A:443~523 531,533~538
    1313 2esi:A
    (3.0Å)
    		 23 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 0,2~15,18~22
    KAN:A:51 0~1,4,6~7
    KAN:A:50 15~19
    1314 2esi:B
    (3.0Å)
    		 21 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:0~22 25~38,40~45
    KAN:A:51 38~42
    KAN:A:50 27~30
    KAN:B:52 38~39
    1315 2esj:A
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    LIV:A:50 15,17~19
    LIV:B:51 3,6~7
    1316 2esj:B
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    LIV:A:50 26,29~30
    LIV:B:51 37~42
    1317 2et3:A
    (2.8Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    LLL:A:50 15,17~19
    LLL:B:51 3~7
    1318 2et3:B
    (2.8Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    LLL:A:50 26~27,30
    LLL:B:51 38,40~42
    1319 2et4:A
    (2.4Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    NMY:A:50 15~19
    NMY:B:51 6~7
    1320 2et4:B
    (2.4Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    NMY:A:50 27,29~30
    NMY:B:51 38~42
    1321 2et5:A
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25~45 2~15,18~22
    RIO:A:54 15~19
    RIO:B:51 6~7
    RIO:B:52 5~8
    RIO:B:53 11~14
    1322 2et5:B
    (2.2Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41~45
    RIO:A:54 29~30
    RIO:B:51 38~42
    RIO:B:52 34~37
    RIO:B:53 28~31
    1323 2et8:A
    (2.5Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:B:25 2~4,6~15,17~22
    XXX:B:51 4,7
    1324 2et8:B
    (2.5Å)
    		 21 N/A URS000080E2C5 N/A synthetic
    construct
    32630    		 16214802 Assembly1
    rna:A:2~22 25~38,41,43~45
    XXX:B:51 38~42
    1325 2euy:A

    		 34 N/A URS000080E1BE N/A Homo
    sapiens
    9606    		 16373493
    993
    1326 2evy:A

    		 14 N/A URS000080DD4E N/A synthetic
    construct
    32630    		 16894217
    1327 2ez6:C
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    rna:D:1~28 1,27~28
    protein:A:3~220 7~8,11,18~24
    protein:B:3~220 1~6,24~26
    1328 2ez6:D
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    rna:C:1~28 1,27~28
    protein:A:3~220 1~6,23~26
    protein:B:3~220 7~8,11,18~24
    1329 2f4s:A
    (2.8Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1403 1403~1405,1407~1412,1488~1491,
    1494~1498
    XXX:B:501 1405,1408
    1330 2f4s:B
    (2.8Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494,1496~
    1498
    XXX:B:501 1491~1495
    1331 2f4t:A
    (3.0Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1401 1403~1412,1488~1491,1494~1498
    AB9:B:1 1404~1405,1408
    1332 2f4t:B
    (3.0Å)
    		 23 N/A URS000080E29E N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494~1498
    AB9:B:1 1491~1496
    1333 2f4u:A
    (2.6Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:B:1403 1403~1405,1407~1412,1488~1491,
    1494~1498
    AB6:B:41 1405,1408
    1334 2f4u:B
    (2.6Å)
    		 21 N/A URS000080DF2F N/A synthetic
    construct
    32630    		 16492561 Assembly1
    rna:A:1403~1498 1403~1412,1488~1491,1494,1496~
    1498
    AB6:B:41 1491~1497
    1335 2f4v:A
    (3.8Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E34A RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 16492561 Assembly1
    rna:Z:3~6 926,1400~1401,1498,1506
    protein:B:7~243 828,1073~1075,1101~1104,1159
    protein:C:2~207 421,1055~1061,1107~1109,1111~1
    113,1190~1191,1205~1206
    protein:D:2~209 8,401~413,426~430,436~438,509,
    511~512,541~547,613,619~620
    protein:E:5~154 6~10,15~16,18~19,559~560,921~9
    22,1069~1070,1074,1077~1081,11
    94,1397
    protein:F:1~101 673~674,737~738
    protein:G:2~156 932~933,935,938~940,1239~1241,
    1291~1292,1297~1298,1346,1351,
    1373~1380
    protein:H:1~138 586~587,590~591,598~600,640~64
    4,653,753,824~826,875~878
    protein:I:2~128 943,967,1117~1119,1127~1130,11
    47~1149,1177~1180,1186~1188,12
    31~1232,1248~1251,1291,1342~13
    50,1367~1369,1371~1373
    protein:J:3~100 963~964,969,972~973,975,1060~1
    061,1123~1125,1150~1153,1189,1
    255,1279~1280,1366,1368
    protein:K:11~129 675~676,684~686,688~692,694~69
    5,704,706~708,716,718,779~780,
    796~797,1523~1525
    protein:L:5~129 33~37,49,302~303,362~363,500~5
    03,520~523,525~526,528~529,537
    ~539,552~553,562~564,567~568,5
    85,880~881,910~912,1492
    protein:M:2~126 947~954,969~970,1225~1230,1295
    ,1297,1302,1307~1310,1320~1321
    ,1328~1330
    protein:N:2~61 973~976,980~981,983,1016,1047~
    1048,1060,1114~1115,1188~1189,
    1202~1203,1216~1219,1316~1317,
    1358~1359,1369
    protein:O:2~89 579~581,656~659,667~669,728~73
    0,739~742,750~755,764
    protein:P:1~83 44,110,134~136,228~230,310~311
    ,375~377,390~393,449~450,452,4
    63,474,608,623~626
    protein:Q:2~105 127~130,190E,234~238,247,253~2
    56,264~265,267,273,275~280,564
    ,582~584,586,760~761
    protein:R:16~88 663~664,673~674,718~720,734~73
    6,835~836
    protein:S:2~85 955,957~958,986~987,1014,1220~
    1224,1226~1227,1310~1315,1318~
    1322
    protein:T:8~106 103~108,133,175~177,185~188,19
    0L,191~195,223,259~261,322~325
    ,332~333,1439,1454~1455,1459
    MG:A:1535 944~945
    MG:A:1537 11~12,21~22
    MG:A:1545 509~510
    MG:A:1549 595~598
    MG:A:1552 885~886
    MG:A:1554 934,1345
    MG:A:1558 964,1199
    MG:A:1561 299,558
    MG:A:1563 572~574
    MG:A:1565 1110,1189
    MG:A:1566 1067~1068,1094
    MG:A:1567 1095,1108
    MG:A:1571 1499~1500,1505
    MG:A:1572 1500,1504~1505,1508
    MG:A:1576 116~117,288~289
    MG:A:1579 782,794
    MG:A:1581 1303~1304
    MG:A:1583 410,431
    MG:A:1586 518,529
    MG:A:1587 121,124~126,235~236
    MG:A:1588 109,331
    MG:A:1594 1054,1198
    MG:A:1603 1238,1335
    MG:A:1607 328~329
    MG:A:1609 516,532~533
    MG:A:1611 924~925
    MG:A:1614 1415~1417
    MG:A:1615 416~417,426~428
    MG:A:1617 785~786
    MG:A:1626 528~529,533
    MG:A:468 9~10
    MG:A:1627 943~944
    MG:A:1628 332~333
    MG:A:1629 317~318
    MG:A:1630 450~452
    MG:A:1632 1048,1214~1215
    MG:A:1634 46,394
    K:A:1539 765~766,811~813
    K:A:1540 767~769
    K:A:1548 21,567,573
    K:A:1550 858,868~869
    K:A:1553 936~939
    K:A:1559 980,1360
    K:A:1560 1054,1197~1198
    K:A:1578 798~800
    K:A:1602 181~183
    K:A:1605 581,758
    K:A:1612 919,1394
    K:A:469 58~59,387
    D2C:A:1636 966,1054,1197~1198
    AB9:A:1637 1404~1405,1491,1493~1496,1498
    1336 2f4x:A

    		 24 N/A URS000080E05B N/A synthetic
    construct
    32630    		 16410614 Assembly1
    rna:B:25~48 9~17
    1337 2f4x:B

    		 24 N/A URS000080E05B N/A synthetic
    construct
    32630    		 16410614 Assembly1
    rna:A:1~24 33~41
    1338 2f87:A

    		 12 N/A URS000080DD9B N/A synthetic
    construct
    32630    		 16838833
    1339 2f88:A

    		 34 GO:0000373 (P) Group II intron splicing URS000080E292 RF00029 synthetic
    construct
    32630    		 16428604
    1340 2f8k:B
    (2.0Å)
    		 16 N/A URS000080E2F1 N/A synthetic
    construct
    32630    		 16429151 Assembly1
    protein:A:440~523 3~9
    1341 2f8s:C
    (3.0Å)
    		 22 N/A URS000080DE2C N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:D:1~22 2~20
    protein:A:3~706 20~22
    1342 2f8s:D
    (3.0Å)
    		 22 N/A URS000080DE2C N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:C:1~22 1~20
    1343 2f8t:C
    (3.1Å)
    		 26 N/A URS000080DF6A N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:D:1~24 2~25
    protein:A:3~706 23~26
    1344 2f8t:D
    (3.1Å)
    		 24 N/A URS000080DF6A N/A synthetic
    construct
    32630    		 17027504 Assembly1
    rna:C:1~26 1~24
    1345 2fcx:A
    (2.0Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    K:A:24 3~4
    K:A:25 8~9
    XXX:A:101 7,14,16
    XXX:B:201 10~11
    1346 2fcx:B
    (2.0Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    XXX:A:101 10~11
    XXX:B:201 7~8,16
    K:B:24 3~4,21
    1347 2fcy:A
    (2.2Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    NMY:A:1001 7~9,14~16
    NMY:B:2001 10~11
    K:A:1002 8~9
    K:A:1003 8~9
    K:A:1004 3~4
    1348 2fcy:B
    (2.2Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    NMY:A:1001 10~11
    NMY:B:2001 7~8,14~16
    K:B:2002 8~9
    K:B:2003 3~4
    1349 2fcz:A
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    K:A:26 8~9
    RIO:A:1024 7~8,14~16
    RIO:B:2024 10~11
    1350 2fcz:B
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    RIO:A:1024 10~11
    RIO:B:2024 7~9,14~16
    K:B:25 8~9
    1351 2fcz:C
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly2
    rna:D:1~23 10~16
    K:C:27 8~9
    RIO:C:3024 7,14~16
    RIO:D:4024 10~11
    1352 2fcz:D
    (2.01Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly2
    rna:C:1~23 10~16
    RIO:C:3024 10~11
    RIO:D:4024 7~9,14~16
    K:D:28 8~9
    1353 2fd0:A
    (1.8Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:B:1~23 10~16
    LIV:A:1001 4,7~8,14~16
    LIV:B:2001 10~11
    K:A:1002 3~4
    K:A:44 22~23
    1354 2fd0:B
    (1.8Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16679451 Assembly1
    rna:A:1~23 10~16
    LIV:A:1001 10~11
    LIV:B:2001 4~5,8,14~16
    K:B:2002 3~4
    1355 2fdt:A

    		 36 GO:0032197 (P) retrotransposition URS000080DE48 RF00436 synthetic
    construct
    32630    		 17000640
    1356 2fey:A

    		 43 N/A URS000080E261 N/A synthetic
    construct
    32630    		 16778765
    1357 2fgp:A
    (2.4Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 4~6
    1358 2fgp:B
    (2.4Å)
    		 12 N/A URS000080DF3F N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    1359 2fgp:C
    (2.4Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    NCO:C:11 20~21
    1360 2fgp:D
    (2.4Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36,38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    NCO:C:11 40~41
    1361 2fk6:R
    (2.9Å)
    		 53 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE34 RF00005 Bacillus
    subtilis
    1423    		 16518398 Assembly1
    protein:A:1~307 3~4,19,56,61~62,73
    protein:A-2:1~307 1,72~73
    1362 2fmt:C
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly1
    protein:A:1~314 2,11~13,24~25,69~76
    1363 2fmt:D
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly2
    protein:B:1~314 2,11~14,24~25,69~76
    1364 2fqn:A
    (2.3Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16452297 Assembly1
    rna:B:26~46 3~15,17~23
    NCO:A:101 13~14
    1365 2fqn:B
    (2.3Å)
    		 21 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16452297 Assembly1
    rna:A:2~23 26~39,42~46
    NCO:B:102 35~37
    1366 2ftc:R
    (12.1Å)
    		 1443 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E087 RF02541
    RF02540    		 Bos
    taurus
    9913    		 16510155 Assembly1
    protein:C:96~306 802,1341~1342
    protein:G:13~157 515~516
    1367 2fy1:B

    		 21 N/A URS000080E02C N/A synthetic
    construct
    32630    		 17318228 Assembly1
    protein:A:1~108 110~112,118~124
    1368 2g1g:A

    		 17 N/A URS000080DDAB N/A synthetic
    construct
    32630    		 16738127
    1369 2g1w:A

    		 22 N/A URS000080E175 N/A synthetic
    construct
    32630    		 16595798
    1370 2g5k:A
    (2.8Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16596680 Assembly1
    rna:B:25~46 3~15,17~23
    AM2:A:102 4~6,8
    AM2:B:101 15,17,19
    1371 2g5k:B
    (2.8Å)
    		 22 N/A URS000080DDFE N/A synthetic
    construct
    32630    		 16596680 Assembly1
    rna:A:2~23 26~38,40~46
    AM2:A:102 38,40,42
    AM2:B:101 27~29,31
    1372 2g92:A
    (1.61Å)
    		 12 N/A URS000080E206 N/A synthetic
    construct
    32630    		 17163665 Assembly1
    rna:B:13~24 1~12
    1373 2g92:B
    (1.61Å)
    		 12 N/A URS000080E206 N/A synthetic
    construct
    32630    		 17163665 Assembly1
    rna:A:1~12 13~24
    1374 2g9c:A
    (1.7Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DFC3 RF00167 Bacillus
    subtilis
    1423    		 17076468 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:106 26~27
    NCO:A:107 41,53~54
    NCO:A:108 47,50~51
    NCO:A:109 24,71
    NCO:A:111 32~33
    3AY:A:91 21~22,51~52,74~75
    1375 2gbh:A

    		 16 N/A URS000080DFC2 N/A synthetic
    construct
    32630    		 14709062
    1376 2gcs:A
    (2.1Å)
    		 21 N/A URS000080E25E N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:B:23 0~5,7~19
    1377 2gcs:B
    (2.1Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:0~20 23~37,39~40,58,60~65,67,115~11
    7
    MG:B:501 36~37
    MG:B:503 79,81
    MG:B:504 57,59
    1378 2gcv:A
    (2.1Å)
    		 20 N/A URS000080E25B N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:B:23~145 1~5,7~19
    MES:A:501 1~2
    1379 2gcv:B
    (2.1Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:1~20 23~37,58,60~65,115~117
    MES:A:501 65~66
    MES:B:502 40,65,67
    MG:B:401 36~37
    MG:B:403 79,81
    MG:B:404 57,59
    1380 2gdi:X
    (2.05Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 16728979 Assembly1
    NA:X:122 64~66
    K:X:123 21~22,72
    K:X:124 21~22,43,71~73
    K:X:125 38~39,70~71,73
    MG:X:101 60,78
    TPP:X:100 19,40,42~43,58,72,77~78
    1381 2gdi:Y
    (2.05Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 16728979 Assembly2
    MG:Y:111 60,78
    TPP:Y:100 19,40,42~43,58,72~73,77~78
    1382 2gic:R
    (2.92Å)
    		 45 N/A URS000080E17E N/A synthetic
    construct
    32630    		 16778022 Assembly1
    protein:A:2~422 29~33,35~37
    protein:B:2~422 20~24,26,28
    protein:C:2~422 11~15,17,19
    protein:D:2~422 2~10
    protein:E:2~422 38~42,44~45
    rna:R-2:1~45 1~2,45
    1383 2gio:A

    		 29 N/A URS000080DE0D N/A synthetic
    construct
    32630    		 16710302
    1384 2gip:A

    		 28 N/A URS000080DED0 N/A synthetic
    construct
    32630    		 16710302
    1385 2gis:A
    (2.9Å)
    		 94 GO:0010468 (P) regulation of gene expr... URS000080DF35 RF00162 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16810258 Assembly1
    MG:A:205 10,63~64
    MG:A:206 84~85
    IRI:A:202 16~18
    IRI:A:203 23,25~28
    IRI:A:204 4~5,88
    SAM:A:301 7,11,45~47,57~59,88~89
    1386 2gje:R
    (3.37Å)
    		 13 N/A URS000080DE5E N/A synthetic
    construct
    32630    		 16923390 Assembly1
    rna:S:40~44 20~23
    protein:A:65~221 17~21
    protein:D:27~173 12~14
    1387 2gjw:E
    (2.85Å)
    		 18 N/A URS000080E337 N/A synthetic
    construct
    32630    		 16690865 Assembly1
    rna:F:3~14 9~12,15~20
    rna:H:15~21 4~10
    protein:A:1~308 14~16
    protein:B:4~307 10~11,13~14,16
    1388 2gjw:F
    (2.85Å)
    		 12 N/A URS000080E0F0 N/A synthetic
    construct
    32630    		 16690865 Assembly1
    rna:E:3~20 4~12
    rna:H:15~21 12~14
    protein:A:1~308 10~11,13
    1389 2gjw:I
    (2.85Å)
    		 19 N/A URS000080E337 N/A synthetic
    construct
    32630    		 16690865 Assembly2
    rna:J:3~14 9~12,15~21
    rna:L:15~21 3~10
    protein:C:1~307 13~16
    protein:D:5~308 10~11,13
    1390 2gjw:J
    (2.85Å)
    		 12 N/A URS000080E0F0 N/A synthetic
    construct
    32630    		 16690865 Assembly2
    rna:I:3~21 4~12
    rna:L:15~21 12~14
    protein:C:1~307 10~11,13
    1391 2gm0:A

    		 35 GO:0019074 (P) viral RNA genome packaging URS000080DE12 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16603544 Assembly1
    rna:B:36~70 1~35
    1392 2gm0:B

    		 35 GO:0019074 (P) viral RNA genome packaging URS000080DE12 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16603544 Assembly1
    rna:A:1~35 36~70
    1393 2go5:9
    (7.4Å)
    		 90 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E04F RF02540 Triticum
    sp.
    4569    		 16675701 Assembly1
    protein:6:17~97 2854~2857,2895,2904~2906
    1394 2go5:A
    (7.4Å)
    		 127 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DFD3 RF00017
    RF01856    		 Canis
    sp.
    9616    		 16675701 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:326~434 184~185,192~195,207~208
    protein:1:-1~130 231~235
    1395 2grw:A

    		 22 N/A URS000080E363 N/A synthetic
    construct
    32630    		 17449731
    1396 2gtt:W
    (3.49Å)
    		 99 N/A URS000080DE2F N/A synthetic
    construct
    32630    		 16778023 Assembly1
    protein:A:6~448 42~49
    protein:B:5~448 33~40
    protein:C:5~448 24~31
    protein:D:6~448 15~19,21~22
    protein:E:6~448 6~10,12~13
    protein:F:6~448 1~4,96~99
    protein:G:6~448 87~94
    protein:H:5~448 78~82,84~85
    protein:I:6~448 69~76
    protein:J:5~448 60~68
    protein:K:5~448 51~58
    1397 2gtt:X
    (3.49Å)
    		 99 N/A URS000080E002 N/A synthetic
    construct
    32630    		 16778023 Assembly2
    protein:L:5~448 1~4,96~99
    protein:M:5~448 87~94
    protein:N:6~448 78~85
    protein:O:6~448 69~76
    protein:P:5~448 60~67
    protein:Q:6~448 51~55,57~58
    protein:R:5~448 42~49
    protein:S:5~448 33~40
    protein:T:5~448 24~31
    protein:U:5~448 15~19,21~22
    protein:V:5~448 7~10,12~13
    1398 2gv3:A

    		 22 N/A URS000080E0A9 N/A synthetic
    construct
    32630    		 16787653
    1399 2gv4:A

    		 22 N/A URS000080E31D N/A synthetic
    construct
    32630    		 17449731
    1400 2gvo:A

    		 18 N/A URS000080DD83 N/A Homo
    sapiens
    9606    		 17041234
    << < 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.