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FURNA
Download all results in tab-seperated text for 19236 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    401 1kog:P
    (3.5Å)

    37 N/A N/A N/A N/A 11953757 Assembly5
    protein:H:242~642 83~90
    protein:H-3:242~642 78~80,95
    402 1kos:A

    17 N/A URS000080DFF6 N/A Saccharomyces
    cerevisiae

    4932
    10393540
    403 1kp7:A

    30 N/A URS000080E000 N/A synthetic
    construct

    32630
    11927954
    404 1kpd:A

    32 N/A URS000080DD65 N/A synthetic
    construct

    32630
    9115361
    405 1kpy:A

    28 N/A URS000080DFFE N/A synthetic
    construct

    32630
    12225754
    406 1kpz:A

    28 N/A URS000080DFFE N/A synthetic
    construct

    32630
    12225754
    407 1kqs:0
    (3.1Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    11828326 Assembly1
    rna:9:3001~3122 955~958,1011~1015,1084,1099,11
    24,1130~1132

    rna:3:74~76 2284~2286,2485~2486,2637
    rna:4:74~75 2542,2588~2590
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1857,1860~1863,
    1868~1884,1898~1900,1939~1944,
    2114,2123,2125,2248,2250,2272~
    2273,2630,2632~2634

    protein:B:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2582,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2713~27
    19,2756~2757,2759~2760,2765~27
    68,2806~2810,2815,2818~2822,28
    28,2837~2840,2842~2843,2846~28
    48,2851~2852,2861~2862,2897~28
    99

    protein:C:1~246 30,34~35,326~330,338~339,447~4
    52,454~455,457~459,474~477,641
    ~642,645~647,656~657,663~664,6
    71~672,674~678,749~751,762,764
    ~766,890,894,1305~1310,1342~13
    44,1351~1352,1358~1363,2100~21
    01

    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778~2784,2792~
    2793,2796

    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~167 965~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2312,2494~24
    95,2501~2504,2518~2522,2531

    protein:I:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2082,2676~2677,28
    03,2814~2815

    protein:J:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764

    protein:K:1~150 165~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,762,897~905,918~920,924~927,
    1042,1294~1300,1302,1353~1354,
    2430~2432,2441~2444,2452~2454,
    2466~2467

    protein:L:1~194 133~137,145,154~161,170~172,17
    5,181~184,187~195,206,227,240~
    244,251,259,261,263~266,378~38
    1,389~394,398~403,409,417,431~
    433,435,770~771,869,1467,1469~
    1472,1864,2122~2123,2132,2244~
    2245,2263~2264,2273~2275

    protein:M:1~186 962,1010,2353,2368~2369,2413~2
    416

    protein:N:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,936,1276
    ~1278

    protein:O:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540~1
    541,1548~1549,1565~1566,1593~1
    598,1704~1708,1715~1720,1760~1
    762,1784~1790,1793~1795,1798,1
    800~1802,1813,1817,2735~2739

    protein:P:1~95 948~953,1018~1019,2295~2300,23
    04~2307,2353~2354,2363~2367,23
    70,2386~2390,2392~2395,2403~24
    04,2423~2424

    protein:Q:1~150 11~12,19~22,492,499~501,510,52
    3~525,840~841,844,1369~1371,13
    73,1428,1431,1689~1690,2048~20
    55,2087~2088,2658~2660,2831~28
    32,2841~2843

    protein:R:1~81 67,1418,1444~1448,1501,1507~15
    08,1673~1676

    protein:S:1~119 30~32,79~82,87,97,99~101,306~3
    09,315~318,332~336,342~344,446
    ~448,483~484,486~489

    protein:T:4~56 1810,2721,2755,2864~2866,2890
    protein:U:1~65 56~57,68~69,71~74,91,93,96
    protein:V:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288

    protein:W:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2726~2727,2744,2834~
    2835,2856~2857,2895~2896,2904~
    2905

    protein:X:95~236 320,521~522,537~541,551~553,55
    6,594~595,617~618,620~623,628~
    629,637~638,905~908,1071~1074,
    1089~1090,1266~1269,1293,1311~
    1313,1315~1317,1325~1331,1333~
    1335,1343,1356

    protein:Y:10~82 796~797,818,820~821,1601,1651~
    1652,1654,1771~1773,1829~1830,
    1885~1887,2018

    protein:Z:1~56 51,111~113,119~121,148~149,179
    ,470~473,772~777,779,845,863~8
    64,881~882,890~892,894,1414~14
    15,1473,1687~1688,1695,1836~18
    37

    protein:1:1~49 53~54,58,60~61,86~88,120~123,4
    62,466,514,1414~1415,1417~1419
    ,1439,1486,1675~1677,1684~1685
    ,1691

    protein:2:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1925,2317~2321,2378
    ~2379,2381~2382,2407~2409,2427
    ~2428,2432~2436,2451,2457~2462
    ,2468

    MG:0:8001 2483,2533~2534
    MG:0:8002 627,2483,2534
    MG:0:8003 876~877,2624
    MG:0:8004 456,459
    MG:0:8005 1836,1838~1839
    MG:0:8006 821~822,854
    MG:0:8007 832,1839~1840
    MG:0:8008 919,2464~2465
    MG:0:8009 2611~2612
    MG:0:8010 836,2615
    MG:0:8011 824,854
    MG:0:8013 877,2623
    MG:0:8014 2102,2537
    MG:0:8015 844,1689
    MG:0:8016 1504,1678~1679
    MG:0:8018 1291~1292
    MG:0:8022 2097,2540
    MG:0:8023 2617~2618
    MG:0:8025 1120~1121
    MG:0:8026 2608~2610
    MG:0:8027 240,269
    MG:0:8028 1448,1677
    MG:0:8029 1503,1679
    MG:0:8030 1748~1749
    MG:0:8031 777~778
    MG:0:8033 1747~1749,2585
    MG:0:8034 2302~2303
    MG:0:8041 196,227~228
    MG:0:8042 1309,1346
    MG:0:8043 816~817
    MG:0:8044 2048,2089
    MG:0:8048 2746,2750
    MG:0:8049 2421,2423
    MG:0:8054 162,2276
    MG:0:8057 1883,2012~2013
    MG:0:8061 1369,2650
    MG:0:8062 1489,1491
    MG:0:8064 2277~2278
    MG:0:8066 1872~1873
    MG:0:8067 1845~1846,1884
    MG:0:8070 166,219
    MG:0:8072 953~954
    MG:0:8074 1286~1287
    MG:0:8075 907~908
    MG:0:8077 880,883
    MG:0:8079 165,167~168
    MG:0:8080 1684,1724
    MG:0:8081 1420~1421,1438
    MG:0:8086 532~533
    MG:0:8087 682~683
    MG:0:8088 2540,2611
    MG:0:8089 516~518
    MG:0:8093 1070~1071
    MG:0:8094 1096,1257
    MG:0:8096 1848~1849
    MG:0:8097 863~864
    MG:0:8101 2281~2282
    MG:0:8104 2104~2105
    MG:0:8107 1106~1107
    MG:0:8110 903,1357
    MG:0:8117 1840~1841,2022
    K:0:8201 2102,2482,2535~2536
    K:0:8202 162~163,172
    NA:0:8301 1069,1072,1087
    NA:0:8302 1119~1122
    NA:0:8303 643~644,904,1354
    NA:0:8305 630~631
    NA:0:8306 2092~2094,2612,2649
    NA:0:8307 40~41,442~443
    NA:0:8308 1394,1432~1433,1724
    NA:0:8309 1133~1134
    NA:0:8310 2577~2579
    NA:0:8311 2523~2525
    NA:0:8314 2541,2607
    NA:0:8315 165~167
    NA:0:8316 896~897
    NA:0:8317 1416~1417
    NA:0:8318 2543~2544
    NA:0:8320 2543~2544,2611,2615
    NA:0:8321 836~837,1736~1737
    NA:0:8323 2112~2113,2475~2476
    NA:0:8324 130,146
    NA:0:8325 776~777,779
    NA:0:8326 1971,2009~2010,2012
    NA:0:8327 821,853~854,1831~1832
    NA:0:8328 56,59~61
    NA:0:8329 66,107~108
    NA:0:8330 140~142
    NA:0:8331 170~171,218~219,221
    NA:0:8332 386~388,402
    NA:0:8333 1894,1897~1898,1939
    NA:0:8334 1894~1897
    NA:0:8335 621~623,630
    NA:0:8336 1706~1707
    NA:0:8339 2540,2611,2616,2645
    NA:0:8340 1740~1741,2033
    NA:0:8341 681~683
    NA:0:8342 891~893
    NA:0:8343 308,335,342
    NA:0:8344 2663,2811~2812,2816~2817
    NA:0:8349 914~915,1043~1045
    NA:0:8350 623~624,901
    NA:0:8353 1040~1041,1295~1296
    NA:0:8354 768~769,2112
    NA:0:8355 1119,1243
    NA:0:8356 920,2278~2279,2463,2467
    NA:0:8357 941~942,1023~1025
    NA:0:8359 898,922~924,2109
    NA:0:8360 453~454,478~479
    NA:0:8362 167~168,2110~2111,2277
    NA:0:8363 1359~1360
    NA:0:8364 636,2057~2058
    NA:0:8365 391~392,398~399
    NA:0:8366 544~545,610~612
    NA:0:8367 464,475
    NA:0:8368 798,814~816
    NA:0:8369 391~392,395
    NA:0:8371 2492,2529
    NA:0:8372 919,922,924
    NA:0:8373 1576~1577,1618~1619
    NA:0:8374 195~196,415~416
    NA:0:8375 868~869,886~887
    NA:0:8376 633,2535~2536,2538~2539
    NA:0:8377 911,1293,1295
    NA:0:8378 762,902~903
    NA:0:8379 831~833
    NA:0:8381 2585~2587,2592
    NA:0:8382 2772~2773
    NA:0:8385 1077,1079
    NA:Q:8338 2659~2660
    NA:Q:8386 12~13
    CL:0:8517 594~595
    CL:0:8522 1072,1087
    PPU:4:76 2486~2487,2541,2588,2618~2620
    PHA:4:77 2103,2620
    ACA:4:78 2102,2486,2538
    BTN:4:79 2099,2540,2645~2646
    408 1kqs:9
    (3.1Å)

    122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00003592C7 RF00001 Haloarcula
    marismortui

    2238
    11828326 Assembly1
    rna:0:10~2914 3080~3083,3087,3091,3100~3105
    protein:D:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059

    protein:M:1~186 3004~3008,3010~3011,3013~3014,
    3026~3028,3034~3037,3046,3048~
    3052,3068~3069,3114,3117~3119

    protein:P:1~95 3008~3009,3011,3069
    protein:V:1~154 3084~3088,3097~3099
    MG:9:8095 3021,3056~3057
    NA:9:8383 3021,3055,3057~3059
    409 1kuq:B
    (2.84Å)

    57 N/A URS000080E305 N/A Thermus
    thermophilus

    274
    15627386 Assembly1
    protein:A:3 20~23,30~34,37~40,49~51,53~54
    410 1kxk:A
    (3.0Å)

    70 GO:0000373 (P) Group II intron splicing URS000080DEDD RF00029 Saccharomyces
    cerevisiae

    4932
    11859154 Assembly1
    MG:A:71 53~54
    411 1l1c:C

    29 N/A N/A N/A N/A 11953318 Assembly1
    protein:A:1~55 4~6,25~28
    protein:B:1~55 6~9,23~26
    412 1l1w:A

    29 N/A URS000080E199 N/A Homo
    sapiens

    9606
    12153712
    s72
    413 1l2x:A
    (1.25Å)

    28 N/A URS000080DE4C N/A synthetic
    construct

    32630
    11904368 Assembly1
    MG:A:29 1~2
    NA:A:61 16~17,21
    NA:A:62 3~4
    NA:A:63 5~6,20~21
    K:A:64 1~2
    414 1l3d:A
    (2.85Å)

    28 N/A URS000080DE4C N/A synthetic
    construct

    32630
    11904368
    415 1l8v:A
    (2.8Å)

    157 GO:0000372 (P) Group I intron splicing URS000080E124 RF00028 synthetic
    construct

    32630
    12189204 Assembly1
    MG:A:307 184,186~187
    MG:A:310 183~184,186
    416 1l8v:B
    (2.8Å)

    157 GO:0000372 (P) Group I intron splicing URS000080E124 RF00028 synthetic
    construct

    32630
    12189204 Assembly2
    MG:B:305 184,186~187
    MG:B:311 173~174
    MG:B:312 183~184,186
    417 1l9a:B
    (2.9Å)

    126 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...
    URS000080DE1E RF00017
    RF01856
    Homo
    sapiens

    9606
    12086622
    1164

    M168_0.6

    M347_0.6

    1373

    1212

    s55

    110

    s71

    s72
    Assembly1
    protein:A:1~87 140~144,146~147,149~151,195~19
    8,204~205

    MG:B:110 164~165
    MG:B:111 226~227
    MG:B:242 170,172
    MG:B:243 171~172
    MG:B:244 227~228
    MG:B:246 166~167
    MG:B:249 208~209
    418 1lc4:A
    (2.54Å)

    21 N/A URS000080E29E N/A synthetic
    construct

    32630
    12079787 Assembly1
    rna:B:26~46 3~16,19~23
    TOY:A:47 16,18~20
    TOY:B:48 4~5,7~8
    419 1lc4:B
    (2.54Å)

    21 N/A URS000080E29E N/A synthetic
    construct

    32630
    12079787 Assembly1
    rna:A:3~23 26~39,42~46
    TOY:A:47 27~28,31
    TOY:B:48 39,41~43
    420 1lc6:A

    24 N/A URS000080E06C N/A synthetic
    construct

    32630
    11992125
    421 1ldz:A

    30 N/A URS000080E384 N/A synthetic
    construct

    32630
    9813122
    422 1lmv:B

    10 N/A URS000080E2FE N/A Saccharomyces
    cerevisiae

    4932
    12426583
    403

    168

    387
    Assembly1
    rna:A:1~9 1~10
    423 1lng:B
    (2.3Å)

    97 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...
    URS000080E11F RF00169 Methanocaldococcus
    jannaschii

    2190
    12050674 Assembly1
    protein:A:1~87 157~160,162~167,206~209,215~21
    6

    MG:B:402 209,211
    424 1lnt:A
    (1.7Å)

    12 N/A URS000080E184 N/A synthetic
    construct

    32630
    12777762 Assembly1
    rna:B:13~24 1~12
    425 1lnt:B
    (1.7Å)

    12 N/A URS000080DF26 N/A synthetic
    construct

    32630
    12777762 Assembly1
    rna:A:1~12 13~24
    426 1lpw:B

    10 N/A URS000080E2FE N/A Saccharomyces
    cerevisiae

    4932
    12426583
    403

    168

    387
    Assembly1
    rna:A:1~9 1~10
    427 1ls2:B
    (16.8Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000011107D RF00005 Saccharomyces
    cerevisiae

    4932
    12093756
    428 1lu3:A
    (16.8Å)

    17 N/A URS000080DDDE N/A Saccharomyces
    cerevisiae

    4932
    12093756
    429 1luu:A

    17 N/A URS000080E0DF N/A synthetic
    construct

    32630
    14643656
    430 1lux:A

    17 N/A URS000080E0DF N/A synthetic
    construct

    32630
    14643656
    431 1lvj:A

    31 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex
    URS000080DD99 RF00250 Human
    immunodeficiency
    virus
    1

    11676
    12079782 Assembly1
    PMZ:A:47 22~26,39~40
    432 1m1k:A
    (3.2Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    12150912 Assembly1
    rna:B:3001~3122 955~958,1011~1015,1084,1099,11
    24,1130~1132

    protein:C:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1857,1860~1863,
    1868~1882,1884,1898~1900,1939~
    1944,2114,2123,2125,2248,2250,
    2270~2273,2625,2630,2632~2634

    protein:D:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2583,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2713~27
    19,2756~2757,2759~2760,2765~27
    68,2806~2810,2815,2818~2822,28
    28,2837~2840,2842,2846~2848,28
    51~2852,2861~2862,2897~2899

    protein:E:1~246 34~35,327~330,338~339,347,447~
    452,454~455,457~458,474~476,64
    2,645~647,656~657,663~664,671~
    672,674~678,749~751,762~766,89
    0,894,1305~1310,1342~1344,1351
    ~1352,1358~1363,2100~2101

    protein:F:10~174 2333,2336~2338,2345~2351
    protein:G:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778~2784,2792~
    2793,2796

    protein:H:1~119 243~246,261~264
    protein:I:12~73 1150~1151,1210~1211
    protein:J:1~167 964~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2312,2494~24
    95,2501~2504,2518~2522,2531

    protein:K:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2082,2676~2677,28
    03,2814~2815

    protein:L:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764

    protein:M:1~150 165~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,762,897~905,918,920,924~927,
    1042,1294~1300,1302,1353~1354,
    2430~2432,2441~2444,2452~2454,
    2465~2467

    protein:N:1~194 133~136,145,154~161,170~172,17
    5,181~184,187~195,206,227,240~
    244,251,259,261,263~266,378~38
    1,388~389,391~394,398~404,409,
    417,431~433,435,770~771,869,14
    67,1469~1472,1864,2121~2123,21
    31~2132,2243~2245,2263~2264,22
    66,2273~2275

    protein:O:1~186 962,1010,2353,2368~2369,2413~2
    417

    protein:P:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278

    protein:Q:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540~1
    541,1548~1549,1565~1566,1593~1
    598,1704~1708,1715~1720,1760~1
    762,1784~1790,1793~1795,1798,1
    800~1802,1813,1817,2735~2739

    protein:R:1~95 948~953,1010,1018~1019,2295~23
    00,2304~2307,2353~2354,2363~23
    67,2370,2386~2390,2392~2395,24
    03~2404,2424

    protein:S:1~150 11~12,19~22,492,499~501,523~52
    6,840~841,843~844,1369~1370,13
    72~1373,1428,1431,1689~1690,20
    48~2055,2087~2089,2658~2660,28
    31~2832,2841~2843

    protein:T:1~81 67~68,1418,1444~1448,1501,1507
    ~1508,1673~1676

    protein:U:1~119 30~31,79~82,87,97,99~101,303,3
    06~309,315~318,332~336,342~344
    ,446~448,483~484,486~489

    protein:V:4~56 1810,2721,2755,2864~2866,2890
    protein:W:1~65 57,68~69,71~74,91,93,96
    protein:X:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288

    protein:Y:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2727,2744,2834~2835,
    2856~2857,2895~2896,2904~2905

    protein:Z:95~236 320,521~522,537~541,552~554,55
    6,594~595,617~618,620~623,628~
    629,637~638,905~908,1071~1074,
    1089~1090,1266~1269,1293,1311~
    1313,1315~1317,1324~1331,1333~
    1335,1343,1356,2059

    protein:1:10~82 796~797,818~821,1601,1651~1652
    ,1654,1771~1773,1829,1885~1887

    protein:2:1~56 51,111~113,119~121,148~149,178
    ~179,182,470~473,772~779,845,8
    63~864,881~882,890~892,894,141
    4~1415,1473,1687~1688,1694~169
    5,1836~1837

    protein:3:1~49 53,58,60~61,86~88,121~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91

    protein:4:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1923,1925,2120~2122
    ,2317~2321,2378~2382,2407~2409
    ,2427~2428,2432~2438,2451~2452
    ,2457~2462,2468

    ZIT:A:8600 839,2099~2100,2540,2645~2646
    MG:A:8001 2483,2533~2534
    MG:A:8002 627,2483,2534
    MG:A:8003 876~877,2624
    MG:A:8004 456,459
    MG:A:8005 1836,1838~1839
    MG:A:8006 821~822,854
    MG:A:8007 832,1839~1840
    MG:A:8008 919,2464~2465
    MG:A:8009 2611~2612
    MG:A:8010 836,2615
    MG:A:8011 824,854
    MG:A:8013 877,2623
    MG:A:8014 2102,2537
    MG:A:8015 844,1689
    MG:A:8016 1504,1678~1679
    MG:A:8018 1291~1292
    MG:A:8022 2097,2540
    MG:A:8023 2617~2618
    MG:A:8024 1380~1381
    MG:A:8025 1120~1121
    MG:A:8026 2608~2610
    MG:A:8027 240,269
    MG:A:8028 1448,1677
    MG:A:8029 1503,1679
    MG:A:8030 1748~1749
    MG:A:8031 777~778
    MG:A:8033 1747~1749,2585
    MG:A:8034 2302~2303
    MG:A:8041 196,227~228
    MG:A:8042 1309,1346
    MG:A:8043 816~817
    MG:A:8044 2048,2089
    MG:A:8048 2746,2750
    MG:A:8049 2421,2423
    MG:A:8054 162,2276
    MG:A:8057 1883,2012~2013
    MG:A:8061 1369,2650
    MG:A:8062 1489,1491
    MG:A:8064 2277~2278
    MG:A:8067 1845~1846,1884
    MG:A:8070 166,219
    MG:A:8074 1286~1287
    MG:A:8075 907~908
    MG:A:8077 880,883
    MG:A:8079 165,167~168
    MG:A:8080 1684,1724
    MG:A:8081 1420~1421,1438
    MG:A:8085 2617~2618
    MG:A:8086 532~533
    MG:A:8087 682~683
    MG:A:8088 2540,2611
    MG:A:8089 516~517
    MG:A:8093 1070~1071
    MG:A:8094 1096,1257
    MG:A:8096 1848~1849
    MG:A:8097 863~864
    MG:A:8101 2281~2282
    MG:A:8102 2434,2458
    MG:A:8103 2578~2579
    MG:A:8104 2104~2105
    MG:A:8107 1106~1107
    MG:A:8110 903,1357
    MG:A:8117 1840~1841,2022
    K:A:8201 2102,2482,2535~2536
    K:A:8202 162~163,169,172
    NA:A:8301 1069,1072,1087
    NA:A:8302 1119~1121
    NA:A:8303 643~644,904,1353~1354
    NA:A:8305 630~631
    NA:A:8306 2092~2094,2612,2649
    NA:A:8307 40~41,442~443
    NA:A:8308 1394,1432~1433,1724
    NA:A:8310 2577~2579
    NA:A:8311 2523~2525
    NA:A:8314 2541,2607~2608
    NA:A:8315 165~167
    NA:A:8316 896~897
    NA:A:8317 1416~1417
    NA:A:8318 2543~2544
    NA:A:8319 2465~2466
    NA:A:8320 2542~2544,2611,2615
    NA:A:8321 836~837,1736~1737
    NA:A:8323 2112~2113,2475~2476
    NA:A:8324 130,146~147
    NA:A:8325 776~777,779
    NA:A:8326 1971,2009~2010,2012
    NA:A:8327 821,853~854,1831~1832
    NA:A:8328 56,59~61
    NA:A:8329 66,107~108
    NA:A:8330 140~142
    NA:A:8331 170~171,218,221
    NA:A:8332 386~388,402
    NA:A:8333 1894,1897~1898,1939
    NA:A:8334 1894~1897
    NA:A:8335 621~623,628,630
    NA:A:8336 1706~1707
    NA:A:8339 2540,2611,2616,2645
    NA:A:8340 1740~1741,2033
    NA:A:8341 681~683
    NA:A:8342 891~893
    NA:A:8344 2663,2811~2812,2816~2817
    NA:A:8349 914~915,1043~1045
    NA:A:8350 623~624,901
    NA:A:8353 1040,1295~1296
    NA:A:8354 768~769,2112
    NA:A:8355 1119,1243
    NA:A:8356 920,2278~2279,2463,2467
    NA:A:8357 941~942,1023~1024
    NA:A:8359 898,922~924,2109
    NA:A:8360 453~454,478~479
    NA:A:8362 167~168,2110~2111,2277
    NA:A:8363 1359~1360
    NA:A:8364 636,2057~2058
    NA:A:8365 391~392,398~399
    NA:A:8366 544~545,610~611
    NA:A:8367 464,475
    NA:A:8368 798,814~816
    NA:A:8369 391~392,395,398
    NA:A:8371 2492,2528~2529
    NA:A:8372 919,922,924
    NA:A:8373 1576~1577,1618~1619
    NA:A:8374 196,415~416
    NA:A:8375 868~869,886~887
    NA:A:8376 633,2535~2536,2538~2539
    NA:A:8377 911,1293,1295
    NA:A:8378 762,902~903
    NA:A:8379 831~833
    NA:A:8381 2585~2587,2592
    NA:A:8382 2772~2773
    NA:A:8385 1077,1079
    NA:J:8309 1133~1134
    NA:S:8338 2659~2660
    NA:U:8343 308,335,342
    CL:A:8513 1300,1329
    CL:A:8517 594~595
    CL:A:8522 1072,1087
    433 1m1k:B
    (3.2Å)

    122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00003592C7 RF00001 Haloarcula
    marismortui

    2238
    12150912 Assembly1
    rna:A:10~2914 3080~3083,3087,3091,3100~3101,
    3103~3105

    protein:F:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059

    protein:O:1~186 3004~3008,3010~3011,3013~3014,
    3026~3029,3034~3037,3046,3048~
    3052,3068,3114,3117~3119

    protein:R:1~95 3008~3009,3011,3069
    protein:X:1~154 3084~3088,3097~3099
    MG:B:8095 3056~3057
    NA:B:8383 3021,3055,3057~3059
    434 1m5k:A
    (2.4Å)

    21 N/A URS000080E1CE N/A synthetic
    construct

    32630
    11298439 Assembly2
    rna:B:1~92 1~21
    435 1m5k:B
    (2.4Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    11298439 Assembly2
    rna:A:1~21 1~9,11~14,25~27,55,57,61,85~91
    protein:C:6~97 36~42,45~46
    CA:B:95 38~39
    CA:B:104 6~7
    CA:B:105 47~48
    436 1m5k:D
    (2.4Å)

    21 N/A URS000080E1CE N/A synthetic
    construct

    32630
    11298439 Assembly1
    rna:E:1~92 1~21
    437 1m5k:E
    (2.4Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    11298439 Assembly1
    rna:D:1~21 1~9,11~14,25~27,55,57,61,85~91
    protein:F:6~97 36~42,45~46
    CA:E:93 22,59
    CA:E:94 38~39
    CA:E:100 55,58
    CA:E:105 15~16
    438 1m5l:A

    38 N/A URS000080DDD9 N/A synthetic
    construct

    32630
    12225748
    439 1m5o:A
    (2.2Å)

    21 N/A URS000080E1CE N/A synthetic
    construct

    32630
    12376595 Assembly1
    rna:B:1~92 2~21
    440 1m5o:B
    (2.2Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly1
    rna:A:1~21 1~9,11~14,25~27,55,57,60~61,85
    ~86,88~91

    protein:C:6~97 36~42,45~46
    CA:B:93 38~39
    CA:B:94 40~41
    CA:B:97 34~35
    CA:B:100 83~84
    CA:B:101 27~28
    CA:B:102 22,59
    CA:B:103 2~3
    CA:B:105 43~44
    CA:B:106 7~8
    441 1m5o:D
    (2.2Å)

    21 N/A URS000080E1CE N/A synthetic
    construct

    32630
    12376595 Assembly2
    rna:E:1~92 1~21
    442 1m5o:E
    (2.2Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly2
    rna:D:1~21 1~14,25~27,55,57,60~61,84~92
    protein:F:4~98 36~42,45~46
    CA:E:93 22,59
    CA:E:94 38~39
    CA:E:101 30~31
    CA:E:105 37~38
    443 1m5p:A
    (2.6Å)

    12 N/A URS000080DFCC N/A synthetic
    construct

    32630
    12376595 Assembly1
    rna:B:1~92 2~12
    444 1m5p:B
    (2.6Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly1
    rna:A:1~12 8,11~14,57,60~61,85~91
    rna:M:13~21 1~9,25~27,55,57
    protein:C:6~97 36~42,46
    CA:B:96 38~39
    CA:B:97 22,59
    CA:B:104 44~45
    445 1m5p:D
    (2.6Å)

    12 N/A URS000080DFCC N/A synthetic
    construct

    32630
    12376595 Assembly2
    rna:E:1~92 1~12
    446 1m5p:E
    (2.6Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly2
    rna:D:1~12 8~14,57,60~61,85~92
    rna:P:13~21 1~9,25~27,55,57
    protein:F:6~97 36~42,46
    CA:E:93 38~39
    CA:E:94 22,59
    447 1m5v:A
    (2.4Å)

    12 N/A URS000080DFCC N/A synthetic
    construct

    32630
    12376595 Assembly1
    rna:B:1~92 2~12
    448 1m5v:B
    (2.4Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly1
    rna:A:1~12 8,11~14,57,60~61,85~91
    rna:M:13~21 1~9,25~27,55,57
    protein:C:4~97 36~42,46
    CA:B:93 22,59
    CA:B:94 38~39
    449 1m5v:D
    (2.4Å)

    12 N/A URS000080DFCC N/A synthetic
    construct

    32630
    12376595 Assembly2
    rna:E:1~92 1~12
    450 1m5v:E
    (2.4Å)

    92 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity
    URS000080E2EB RF04190 synthetic
    construct

    32630
    12376595 Assembly2
    rna:D:1~12 8,11~14,57,60~61,85~92
    rna:P:13~21 1~7,9,25~27,55,57
    protein:F:4~97 36~42,46
    CA:E:93 22,59
    CA:E:94 38~39
    CA:E:97 43~44
    CA:E:100 47~48
    CA:E:110 19~20
    451 1m82:A

    25 N/A URS000080E058 N/A synthetic
    construct

    32630
    12771209
    452 1m8y:C
    (2.6Å)

    10 N/A URS000080DDD8 N/A synthetic
    construct

    32630
    12202039 Assembly1
    protein:A:828~1168 11,13~20
    453 1m8y:D
    (2.6Å)

    10 N/A URS000080DDD8 N/A synthetic
    construct

    32630
    12202039 Assembly2
    protein:B:828~1169 13~20
    454 1m90:A
    (2.8Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    12185246 Assembly1
    rna:B:3001~3122 955~958,1011~1015,1084,1099,11
    24,1130~1132

    rna:5:9074~9076 2284~2286,2485~2486,2636
    protein:C:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1856,1860~1863,
    1868~1882,1884,1898~1900,1939~
    1944,2114,2123,2125,2248~2250,
    2270,2272~2273,2625,2630,2632~
    2634

    protein:D:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2583,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2713~27
    19,2756~2757,2759~2760,2765~27
    68,2806~2810,2815,2818~2822,28
    28,2837~2840,2842~2843,2846~28
    48,2851~2853,2861~2862,2897~28
    99

    protein:E:1~246 34~35,326~330,333,338~339,447~
    452,454~455,457~459,474~477,64
    1~642,645~647,656~657,663~664,
    671~672,674~678,749~751,762,76
    4~766,890,894,1305~1311,1342~1
    344,1351~1352,1359~1363,2100~2
    101

    protein:F:10~174 2333,2336~2338,2345~2351
    protein:G:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778,2780~2784,
    2792~2793,2796

    protein:H:1~119 243~246,261~264
    protein:I:12~73 1150~1151,1210~1211
    protein:J:1~167 964~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2312,2494~24
    95,2501~2504,2518~2522,2531

    protein:K:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2082,2676~2677,28
    03,2814~2815

    protein:L:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2686~2687,2708~2709,2711~2712,
    2720~2721,2762~2764

    protein:M:1~150 164~166,196,215~216,220~223,41
    7,623~625,644~645,688,692~694,
    697~700,745,754~755,757~759,76
    2,897~905,918~920,924~927,1041
    ~1042,1294~1300,1302,1353~1354
    ,2430~2432,2441~2444,2452~2454
    ,2466~2467

    protein:N:1~194 133~136,145,154~161,170~172,17
    5,181~184,187~195,206,227,240~
    244,251,259,261,263~266,378~38
    1,383,388~389,391~394,398~404,
    409,417,431~433,435,770~771,86
    9~870,1467,1469~1472,1864,2121
    ~2123,2131~2132,2244~2245,2263
    ~2264,2266,2273~2275

    protein:O:1~186 962,1010,2353,2368~2369,2413~2
    417

    protein:P:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278

    protein:Q:1~143 792~793,800~802,815~816,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739

    protein:R:1~95 948~953,1018~1019,2295~2297,22
    99~2300,2304~2307,2353,2363~23
    67,2370,2386~2390,2392~2395,24
    03~2404,2423~2424

    protein:S:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,843~844,1369~137
    3,1428,1431,1689~1690,2048~205
    5,2087~2088,2658~2660,2831~283
    2,2841~2843

    protein:T:1~81 67,1418,1444~1448,1501,1507~15
    08,1674~1676

    protein:U:1~119 30~32,79~82,87,97,99~101,303,3
    06,308~309,315~318,332~336,342
    ~344,446~448,483~484,486~489

    protein:V:4~56 1810,2721,2755,2864~2866,2890
    protein:W:1~65 57,68~69,72~74,91~93,96
    protein:X:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288

    protein:Y:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2726~2727,2744,2834~
    2835,2856~2857,2895~2896,2904~
    2905

    protein:Z:95~236 320,521,537~541,551~554,556,59
    4~595,617~618,620~623,628~629,
    637~638,905~908,1071~1074,1089
    ~1090,1266~1269,1293,1311~1313
    ,1315~1318,1325~1331,1333~1335
    ,1343,1356

    protein:1:10~82 796~797,818~821,1601,1651~1652
    ,1654,1771~1773,1829~1830,1885
    ~1887

    protein:2:1~56 51,111~113,119~121,148~149,178
    ~179,470~473,772~777,779,845,8
    63~864,881~882,890~892,894,141
    4~1415,1473,1687~1688,1694~169
    5,1836~1837

    protein:3:1~49 53~54,58~61,86~88,120~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91

    protein:4:1~92 169~170,218~220,389~390,395~39
    6,735,1923,1925,2120~2121,2317
    ~2321,2378~2379,2381~2382,2407
    ~2409,2427~2428,2432~2438,2451
    ~2452,2457~2462,2468

    MG:A:8001 2483,2533~2534
    MG:A:8002 627,2483,2534
    MG:A:8003 876~877,2624
    MG:A:8004 456,459
    MG:A:8005 1836,1838~1839
    MG:A:8006 821~822,854
    MG:A:8007 832,1839~1840
    MG:A:8008 919,2464~2465
    MG:A:8009 2611~2612
    MG:A:8010 836,2615
    MG:A:8011 824,854
    MG:A:8013 877,2623
    MG:A:8014 2102,2537
    MG:A:8015 844,1689
    MG:A:8016 1504,1678~1679
    MG:A:8018 1291~1292
    MG:A:8022 2097,2540
    MG:A:8023 2617~2618
    MG:A:8025 1120~1121
    MG:A:8026 2608~2610
    MG:A:8027 240,269
    MG:A:8028 1448,1677
    MG:A:8029 1503,1679
    MG:A:8030 1748~1749
    MG:A:8031 777~778
    MG:A:8033 1747~1749,2585
    MG:A:8034 2302~2303
    MG:A:8041 196,227~228
    MG:A:8042 1309,1346
    MG:A:8043 816~817
    MG:A:8044 2048,2089
    MG:A:8048 2746,2750
    MG:A:8049 2421,2423
    MG:A:8054 162,2276
    MG:A:8057 1883,2012~2013
    MG:A:8061 1369,2650
    MG:A:8062 1489,1491
    MG:A:8064 2277~2278,2471
    MG:A:8066 1872~1873
    MG:A:8067 1845~1846,1884
    MG:A:8070 166,219
    MG:A:8074 1286~1287
    MG:A:8075 907~908
    MG:A:8077 880,883
    MG:A:8079 165,167~168
    MG:A:8080 1684,1724
    MG:A:8081 1420~1421,1438
    MG:A:8086 532~533
    MG:A:8087 682~683
    MG:A:8088 2540,2611
    MG:A:8089 516~518
    MG:A:8093 1070~1071
    MG:A:8094 1096,1257
    MG:A:8096 1848~1849
    MG:A:8097 863~864
    MG:A:8101 2281~2282
    MG:A:8102 2434,2458
    MG:A:8103 2578~2579
    MG:A:8104 2104~2105
    MG:A:8107 1106~1107
    MG:A:8110 903,1357
    MG:A:8117 1840~1841,2022
    MG:A:8119 1377,1683
    NA:A:8301 1068~1069,1072,1087
    NA:A:8302 1119~1122
    NA:A:8303 643~644,904,1354
    NA:A:8305 630~632
    NA:A:8306 2092~2094,2612,2649
    NA:A:8307 40~41,442~443
    NA:A:8308 1394,1432~1433,1724
    NA:A:8309 1133~1134
    NA:A:8310 2577~2579
    NA:A:8311 2523~2525
    NA:A:8314 2541,2607
    NA:A:8315 165~167
    NA:A:8316 896~897
    NA:A:8317 1416~1417
    NA:A:8318 2543~2544
    NA:A:8319 2465~2466
    NA:A:8320 2543~2544,2611,2615
    NA:A:8321 836~837,1736~1737
    NA:A:8323 2112~2113,2475~2476
    NA:A:8324 130,146
    NA:A:8325 776~777,779
    NA:A:8326 1971,2009~2010,2012
    NA:A:8327 821,853~854,1831~1832
    NA:A:8328 56,59~61
    NA:A:8329 66,107~108
    NA:A:8330 140~142
    NA:A:8331 170~171,218~219,221
    NA:A:8332 386~388,402
    NA:A:8333 1894,1897~1898,1939
    NA:A:8334 1894~1897
    NA:A:8335 621~623,628,630
    NA:A:8336 1706~1707
    NA:A:8338 2659~2660
    NA:A:8339 2540,2611,2616,2645
    NA:A:8340 1740~1741,2033
    NA:A:8341 681~683
    NA:A:8342 891~893
    NA:A:8344 2663,2811~2812,2816~2817
    NA:A:8349 914~915,1043~1045
    NA:A:8350 623~624,901
    NA:A:8353 1040,1295~1296
    NA:A:8354 768~769,2112
    NA:A:8355 1119,1243
    NA:A:8356 920,2278~2279,2463,2467
    NA:A:8357 941~942,1023~1024
    NA:A:8359 898,922~924,2109
    NA:A:8360 453~454,478~479
    NA:A:8362 167~168,2110~2111,2277
    NA:A:8363 1359~1360
    NA:A:8364 636,2057~2058
    NA:A:8365 391~392,398~399
    NA:A:8366 544~545,611~612
    NA:A:8367 464,475
    NA:A:8368 798,814~816
    NA:A:8369 391~392,395,398
    NA:A:8371 2492,2529
    NA:A:8372 919,922,924
    NA:A:8373 1576~1577,1618~1619
    NA:A:8374 195~196,415~416
    NA:A:8375 868~869,886~887
    NA:A:8376 633,2535~2536,2538~2539
    NA:A:8377 911,1293,1295
    NA:A:8378 762,902~903
    NA:A:8379 831~832
    NA:A:8381 2585~2587,2592
    NA:A:8382 2772~2773
    NA:A:8385 1077,1079
    NA:U:8343 308,335,342
    K:A:8390 2102,2482,2535~2536
    K:A:8391 162~163,169,172
    CL:A:8517 594~595
    CL:A:8522 1072,1087,1291
    SPS:5:9080 2486~2487,2619~2620,2637
    PHA:5:9077 2104,2620
    ACA:5:9078 2102,2538
    455 1m90:B
    (2.8Å)

    122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00003592C7 RF00001 Haloarcula
    marismortui

    2238
    12185246 Assembly1
    rna:A:10~2914 3080~3083,3087,3091,3100~3101,
    3103~3105

    protein:F:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059

    protein:O:1~186 3004~3008,3010~3011,3013~3014,
    3026~3028,3034~3037,3046~3052,
    3068,3114,3117~3119

    protein:R:1~95 3008~3009,3011,3069
    protein:X:1~154 3084~3088,3097~3099
    MG:B:8095 3056~3057
    NA:B:8383 3021~3022,3057~3059
    456 1me1:A

    12 N/A URS000080E07A N/A synthetic
    construct

    32630
    13129354
    457 1mfj:A

    20 N/A URS000080E1C3 N/A synthetic
    construct

    32630
    12384583
    458 1mfk:A

    23 N/A URS000080DE74 N/A synthetic
    construct

    32630
    12421564
    459 1mfq:A
    (3.1Å)

    128 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...
    URS000080DE1E RF00017
    RF01856
    Homo
    sapiens

    9606
    12244299
    1164

    M168_0.6

    M347_0.6

    1373

    1212

    s55

    110

    s71

    s72
    Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4

    protein:C:323~438 184,192~195,207~208
    MG:A:501 192~194
    MG:A:502 183,185
    MG:A:505 116~117
    460 1mfy:A

    31 N/A URS000080E028 N/A synthetic
    construct

    32630
    12582241
    461 1mhk:L
    (2.5Å)

    14 N/A URS000080DEAA N/A synthetic
    construct

    32630
    12554875 Assembly1
    rna:S:1~12 6~14
    462 1mhk:S
    (2.5Å)

    12 N/A URS000080E004 N/A synthetic
    construct

    32630
    12554875 Assembly1
    rna:L:1~14 1~10
    BR:S:13 3~4
    463 1mj1:C
    (13.0Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000011107D RF00005 Escherichia
    coli

    562
    12379845 Assembly1
    rna:R:1~27 11~12
    464 1mj1:D
    (13.0Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000011107D RF00005 Escherichia
    coli

    562
    12379845 Assembly1
    protein:A:1~405 50~52,65~67,76
    protein:O:1~124 12~13,69~71
    465 1mj1:Q
    (13.0Å)

    41 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E0FF RF02541 Escherichia
    coli

    562
    12379845
    466 1mj1:R
    (13.0Å)

    27 N/A URS000080DD40 N/A Escherichia
    coli

    562
    12379845 Assembly1
    rna:C:1~76 4~5
    467 1mji:C
    (2.5Å)

    34 N/A URS000080E085 N/A Escherichia
    coli

    562
    12515387 Assembly1
    rna:D:26~59 45~47
    protein:A:3~182 26~31,55~58
    protein:B:4~182 41~45
    MG:C:203 38~39,47~48
    K:C:206 32~33
    468 1mji:D
    (2.5Å)

    34 N/A URS000080E085 N/A Escherichia
    coli

    562
    12515387 Assembly1
    rna:C:26~59 45~46
    protein:A:3~182 41~43,45
    protein:B:4~182 27~31,50,55~58
    MG:D:204 38~39,47~48
    K:D:205 32~33
    469 1ml5:A
    (14.0Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Escherichia
    coli

    562
    12511961 Assembly1
    protein:G:2~209 427,430
    protein:L:2~128 1367~1368
    protein:P:2~126 1229,1329~1330
    470 1ml5:B
    (14.0Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000011107D RF00005 Escherichia
    coli

    562
    12511961 Assembly1
    rna:C:11~16 34~36
    rna:a:1~2902 25,75
    protein:Z:4~365 1,72~74
    471 1ml5:a
    (14.0Å)

    2889 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E1D6 RF02540
    RF02541
    RF00002
    Escherichia
    coli

    562
    12511961 Assembly1
    rna:B:1~76 1923,2602
    protein:c:5~228 2123~2124
    protein:e:38~320 1997,2572,2680,2784
    protein:f:1~246 38~39,322,469,607,2060
    protein:o:51~145 636~637
    protein:x:1~60 969~970
    472 1ml5:b
    (14.0Å)

    123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001170B4 RF00001 Escherichia
    coli

    562
    12511961
    473 1mme:A
    (3.1Å)

    16 N/A URS000080DF69 N/A synthetic
    construct

    32630
    7541315 Assembly1
    rna:B:114~15 25,23,22,21,30,40,50,60,70,80,
    90,101~104
    474 1mme:B
    (3.1Å)

    25 N/A URS000080E0D1 N/A synthetic
    construct

    32630
    7541315 Assembly1
    rna:A:25~104 114,113,112,111,120,130,140,15
    2~153,161,170,11~15
    475 1mme:C
    (3.1Å)

    16 N/A URS000080DF69 N/A synthetic
    construct

    32630
    7541315 Assembly2
    rna:D:114~15 25,23,22,21,30,40,50,60,70,80,
    90,101~104
    476 1mme:D
    (3.1Å)

    25 N/A URS000080E0D1 N/A synthetic
    construct

    32630
    7541315 Assembly2
    rna:C:25~104 114,113,112,111,120,130,140,15
    1~153,161,170,11~15
    477 1mms:C
    (2.57Å)

    58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E044 RF02540
    RF02541
    Thermotoga
    maritima

    2336
    10338213
    8634289
    6806287
    111931
    Assembly1
    protein:A:8~140 1058~1065,1076~1082,1088
    CD:C:202 1086~1087
    MG:C:210 1073,1094
    MG:C:215 1061~1062,1070
    MG:C:226 1070,1072~1073
    MG:C:257 1070,1072
    MMC:C:227 1078,1089
    MMC:C:230 1061,1070
    478 1mms:D
    (2.57Å)

    58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E044 RF02540
    RF02541
    Thermotoga
    maritima

    2336
    10338213
    8634289
    6806287
    111931
    Assembly2
    protein:B:71~140 1058~1060,1062~1065,1076~1082,
    1088

    CD:D:302 1086~1087
    MG:D:326 1070,1072~1073
    MG:D:375 1061~1062,1070
    MG:D:380 1070,1072
    MG:D:385 1073,1094
    MMC:D:332 1061,1070
    MMC:D:347 1078,1089
    479 1mnb:B

    28 N/A URS000080DE03 N/A synthetic
    construct

    32630
    7502045 Assembly1
    protein:A:1~14 5~8,14~22
    480 1mnx:A

    42 N/A URS000080E247 N/A Spinacia
    oleracea

    3562
    12527295
    481 1msw:R
    (2.1Å)

    10 N/A N/A N/A N/A 12242451 Assembly1
    dna:T:130~111 7,6,5,4,3,2,1
    protein:D:2~883 10,9,7,6,5,4,3,2,1
    482 1msy:A
    (1.41Å)

    27 N/A URS000080E188 N/A synthetic
    construct

    32630
    12592009
    483 1mt4:A

    24 N/A URS000080DDEA N/A synthetic
    construct

    32630
    12514124
    484 1mvr:A
    (12.8Å)

    45 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E256 RF00177 Escherichia
    coli
    K-12

    83333
    12511960
    485 1mvr:B
    (12.8Å)

    96 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E1ED RF00177 Escherichia
    coli
    K-12

    83333
    12511960
    486 1mvr:C
    (12.8Å)

    19 N/A URS000080E1B9 N/A Escherichia
    coli
    K-12

    83333
    12511960
    487 1mvr:D
    (12.8Å)

    59 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE15 RF02541 Escherichia
    coli
    K-12

    83333
    12511960
    488 1mvr:E
    (12.8Å)

    27 N/A URS000080DDD7 N/A Escherichia
    coli
    K-12

    83333
    12511960
    489 1mwl:A
    (2.4Å)

    21 N/A URS000080E2C5 N/A synthetic
    construct

    32630
    12589761 Assembly1
    rna:B:24~44 2~15,18~22
    GET:A:45 15~19
    GET:A:46 4~8
    490 1mwl:B
    (2.4Å)

    21 N/A URS000080E2C5 N/A synthetic
    construct

    32630
    12589761 Assembly1
    rna:A:2~22 24~37,40~44
    GET:A:45 25~30
    GET:A:46 37,39~41
    491 1my9:A

    14 N/A URS000080E08F N/A synthetic
    construct

    32630
    12367521 Assembly1
    rna:B:15~28 1,3~4,10,12~13
    492 1my9:B

    14 N/A URS000080E08F N/A synthetic
    construct

    32630
    12367521 Assembly1
    rna:A:1~14 15,17~18,24,26~27
    493 1mzp:B
    (2.65Å)

    55 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E19B RF02543
    RF02541
    synthetic
    construct

    32630
    12514741 Assembly1
    protein:A:1~217 17~25,36~43,45~49
    494 1n32:A
    (3.0Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    12464183 Assembly1
    rna:Y:28~42 530~531,1054,1493
    rna:Z:1~4 530,1397,1492~1493,1544
    protein:B:7~240 828~829,1073~1075,1101~1104
    protein:C:2~207 532,1055~1061,1106~1109,1111~1
    112,1189~1193,1205~1206,1256

    protein:D:2~209 8,26,401~412,426~430,437~438,4
    90,508~509,511~512,540~547,619
    ~620

    protein:E:5~154 5~10,15~16,18~19,559~560,921~9
    23,1069~1070,1072~1074,1077~10
    81,1192,1194,1397~1398

    protein:F:1~101 673~674,710~711,736~739
    protein:G:2~156 932~933,935,939~940,1092,1240~
    1241,1289,1291~1292,1298,1346,
    1351,1372,1374~1380,1539

    protein:H:1~138 586~588,590~591,597~600,640~64
    4,653,753,825~826,875~878

    protein:I:2~128 967~968,1117~1119,1128~1131,11
    47~1149,1178~1180,1186~1187,12
    31~1233,1248~1251,1291~1292,13
    42~1350,1366~1373

    protein:J:3~100 963~964,969,972~973,975,1059~1
    061,1123~1125,1150~1153,1189,1
    197~1199,1254~1255,1279~1280,1
    366~1368

    protein:K:11~129 675~677,683~686,688~692,694~69
    5,704,706~708,716,718,778~780,
    797,1523~1525

    protein:L:5~128 24,32~37,49,302~303,363~364,50
    0~503,518~523,527~529,537~539,
    552~553,556,562,564,567~568,58
    5,880~881,909~913,1412,1490,14
    92

    protein:M:2~119 947~954,1226~1229,1296~1297,13
    02,1306~1310,1321,1328~1331

    protein:N:2~61 973~976,979~983,994,1016,1047~
    1048,1060,1114~1115,1186~1189,
    1202~1203,1216~1217,1219,1316~
    1317,1358~1359,1368~1369

    protein:O:2~89 579~582,656~660,666~669,728,73
    0,739~742,750~755,808

    protein:P:1~83 43~44,110,134~137,228~229,310,
    375~377,390~393,450,452~454,46
    2~463,474,609,617,624~626

    protein:Q:2~105 127~128,130,190E,234~237,246~2
    47,253~256,264~265,267,275~280
    ,564,582~583,585~586,760~761,8
    96

    protein:R:16~88 663~664,673~674,718~721,734~73
    6,835

    protein:S:2~81 957~958,978,986,1014,1220~1223
    ,1225~1227,1310~1315,1318~1322

    protein:T:8~106 61,102~104,107~108,132~133,175
    ~177,185~188,190L,191~195,259~
    263,322~325,332~333,1439,1453~
    1455,1459~1460

    protein:V:2~25 1235~1236,1243~1244,1267~1269,
    1285~1286,1304~1305,1325~1329,
    1352~1353

    PAR:A:1545 1405~1406,1408,1491~1495
    MG:A:1546 944~945
    MG:A:1547 1223~1224
    MG:A:1548 12,21~22
    MG:A:1551 749~750
    MG:A:1558 509~510
    MG:A:1562 595~596,598
    MG:A:1563 858,869
    MG:A:1571 964,1199
    MG:A:1574 1053~1054,1197
    MG:A:1575 1054,1197~1198
    MG:A:1576 299,558
    MG:A:1578 572~574
    MG:A:1581 865~866,1079
    MG:A:1582 1067~1068,1094
    MG:A:1583 1095,1108
    MG:A:1586 1510~1512,1523
    MG:A:1587 1500,1508,1521
    MG:A:1588 1499~1500,1505
    MG:A:1589 1500,1504~1505,1508
    MG:A:1592 182~183
    MG:A:1593 116~117,289
    MG:A:1595 372,376,387
    MG:A:1597 782,794
    MG:A:1598 1053,1198~1199
    MG:A:1599 1303~1304
    MG:A:1600 563~564,566~567
    MG:A:1604 504~505
    MG:A:1605 518,529
    MG:A:1606 121,124~126,235~236
    MG:A:1608 109,329,331
    MG:A:1610 61~62,105
    MG:A:1614 518,530
    MG:A:1615 830~831,855
    MG:A:1623 1090~1091,1094~1095
    MG:A:1625 181~183
    MG:A:1626 1238,1335
    MG:A:1628 581,758
    MG:A:1633 516,533
    MG:A:1636 1200,1205
    MG:A:1637 921~922,1393
    MG:A:1639 925,927,1390~1391
    MG:A:1642 1414~1415,1486
    MG:A:1643 1415~1417
    MG:A:1644 414,427~428
    MG:A:1646 785~786
    MG:A:1648 592~593
    MG:A:1650 937,1345,1377
    MG:A:1652 115~117,289
    MG:A:1657 48,115
    MG:A:1662 528,533,535
    MG:A:464 129,231~232
    MG:A:467 107,326
    MG:A:469 59,387
    MG:A:473 1300~1301,1332
    MG:A:1664 943~945
    MG:A:1665 949,971,1233,1364
    MG:A:1666 576,758,880
    MG:A:1667 332~333
    MG:A:1668 317~318
    MG:A:1669 450~452
    MG:A:1672 1048,1050,1214~1215
    MG:A:1673 927~928
    MG:A:1675 308~309
    MG:A:1676 46,394
    MG:A:1678 557~558
    MG:A:493 934,936
    MG:J:449 972~973
    495 1n32:Y
    (3.0Å)

    15 N/A URS000080DD28 N/A Thermus
    thermophilus

    274
    12464183 Assembly1
    rna:A:5~1544 34~37
    rna:Z:1~4 34~37
    496 1n33:A
    (3.35Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    12464183 Assembly1
    rna:Y:30~40 530,1054,1493
    rna:Z:1~4 530,1492~1493,1544
    protein:B:7~240 829,1073~1075,1101~1102,1104
    protein:C:2~207 532,1055~1060,1106~1109,1111~1
    112,1189~1191,1205~1206,1256

    protein:D:2~209 8,28,401~413,425~430,437,490,5
    09,511~512,540~546,616,619~620

    protein:E:5~154 6~10,15~16,18~19,559~560,921~9
    22,1070,1072~1074,1077~1081,11
    92,1397~1398

    protein:F:1~101 673~674,711,736~739
    protein:G:2~156 932~933,935,938~940,1092,1240,
    1291~1292,1298,1346,1351,1372~
    1380,1539

    protein:H:1~138 586~587,590~591,598~600,640~64
    4,653,753,825~826,875~878

    protein:I:2~128 967~968,1117~1119,1128,1130~11
    31,1147~1149,1178~1180,1186~11
    87,1231~1233,1248~1251,1291,13
    42~1350,1367~1369,1371~1373

    protein:J:3~100 963~964,969,972~973,1059~1061,
    1123~1125,1150~1153,1189,1197,
    1253~1254,1279~1280,1366~1368

    protein:K:11~129 675~677,683~685,688~692,694~69
    5,704,706~708,716,718,779~780,
    796~797,1523,1525

    protein:L:5~128 33~37,241,362~363,501~503,518~
    523,528~529,537~539,552~553,55
    6,562,564,567~568,585,880~881,
    909~913,1411~1412,1490~1492

    protein:M:2~119 947~954,1225~1229,1295,1297,13
    01~1302,1306~1310,1321,1328~13
    31

    protein:N:2~61 973~974,976,979~983,1048~1049,
    1114~1115,1188,1202~1203,1216~
    1217,1219,1316~1317,1358~1359

    protein:O:2~89 579~581,656~660,667~669,728~73
    0,739~742,750~755,808

    protein:P:1~83 43~44,110,134~137,227~230,310,
    375~377,390~393,450,452,462~46
    3,474,617,623~625,627

    protein:Q:2~105 127~128,130,190E,234~237,246~2
    47,253~256,264~265,267,275~280
    ,564,582~583,585~586,760~761,8
    97

    protein:R:16~88 664,674,718~720,734~736,835~83
    6

    protein:S:2~81 958,986,1014,1220~1223,1227,13
    11,1313~1314,1317~1320,1322

    protein:T:8~106 102~105,107~108,175~177,185~18
    8,190L,191~195,223,259~263,322
    ~324,332~333,1438~1439,1453~14
    55,1459~1460

    protein:V:2~25 1235~1236,1244,1267,1269,1286,
    1305,1325~1330,1352~1353

    PAR:A:1545 1405~1408,1491~1494
    MG:A:1546 944~945
    MG:A:1550 749~750
    MG:A:1557 509~510
    MG:A:1561 595~598
    MG:A:1562 858,869
    MG:A:1568 964,1199
    MG:A:1570 1053~1054,1197
    MG:A:1571 1054,1196~1198
    MG:A:1572 299,558
    MG:A:1574 572~574
    MG:A:1577 866,1079
    MG:A:1578 1067~1068,1094
    MG:A:1579 1095,1108
    MG:A:1582 1500,1508,1521
    MG:A:1583 1499~1500,1505
    MG:A:1584 1500,1505,1508
    MG:A:1587 116~117,289
    MG:A:1590 782,794
    MG:A:1591 1303~1304
    MG:A:1592 563~565
    MG:A:210 604~605
    MG:A:1596 504~505
    MG:A:1597 518,529
    MG:A:1598 121,124~126,236
    MG:A:1599 174~175
    MG:A:1600 109,331
    MG:A:1601 69~70,98
    MG:A:1616 516,533
    MG:A:1619 924,1390
    MG:A:467 107,324~325
    MG:A:469 58~59,387
    MG:A:473 1301,1332
    MG:A:1631 450~452
    MG:A:1633 23,561
    497 1n33:Y
    (3.35Å)

    11 N/A URS000080E2C2 N/A Thermus
    thermophilus

    274
    12464183 Assembly1
    rna:A:5~1544 34~37
    rna:Z:1~4 34~37
    498 1n34:A
    (3.8Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    12464183 Assembly1
    rna:Z:1~4 530,1397,1493
    protein:B:7~240 828~831,841,1073~1076,1101~110
    4,1158

    protein:C:2~207 421,532,1055~1061,1106~1109,11
    11~1113,1188~1193,1205~1206

    protein:D:2~209 8,401~413,426~430,436~437,508~
    509,511~512,541~547,619~620

    protein:E:5~154 6~10,15~16,18~20,559~560,921~9
    23,1069~1070,1072~1074,1077~10
    78,1080~1081,1192,1194,1397

    protein:F:1~101 673~674,710~711,737~738
    protein:G:2~156 932~933,935,938~939,1240,1291~
    1292,1298,1346,1350~1351,1373~
    1380

    protein:H:1~138 586~591,597~600,640~644,653,75
    3,755,824~826,875~878

    protein:I:2~128 967~968,1117~1119,1127~1131,11
    47~1149,1177~1180,1186~1188,12
    31~1232,1248~1251,1342~1343,13
    45~1350,1366~1373

    protein:J:3~100 963~964,972~973,975,1059~1061,
    1123~1125,1150~1153,1189,1199,
    1253~1254,1279~1280,1367~1368

    protein:K:11~129 675~676,684~686,688~692,694~69
    5,706~708,716~718,777~780,1523
    ~1524

    protein:L:5~128 33~37,241~242,362~363,501~504,
    518~525,527~529,537~539,552~55
    3,556,562~564,567~568,585,880~
    881,910,1492

    protein:M:2~119 947~954,1225~1229,1295~1297,13
    02,1306~1310,1321,1328~1330

    protein:N:2~61 973~976,980~982,994~995,1015,1
    048~1049,1059,1115,1186~1189,1
    202,1216~1217,1219,1316~1317,1
    358~1360

    protein:O:2~89 579~580,656~660,667~668,728~73
    0,739~742,750~754,764

    protein:P:1~83 43~44,110,134~136,227~230,310,
    375~377,390~393,449~450,452,46
    3,474,624~626

    protein:Q:2~105 127~130,190E,234~237,246~247,2
    53~256,264~265,267,275~280,564
    ,582,584,760~761

    protein:R:16~88 664,673~674,718~721,734~736,83
    5

    protein:S:2~81 958,986,1014,1220~1223,1227,13
    10~1314,1317~1322

    protein:T:8~106 61~62,102~104,106~108,177~178,
    185~188,190L,191~195,259,261~2
    63,322~324,332~333,1439,1453~1
    455,1459~1460

    protein:V:2~25 1235~1236,1242~1244,1267~1269,
    1286,1304~1305,1325~1328,1352~
    1353,1364
    499 1n36:A
    (3.65Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    12464183 Assembly1
    protein:B:7~240 829,841,1073~1076,1101~1104,11
    58

    protein:C:2~207 421,532,1055~1058,1060,1106~11
    09,1111~1112,1189~1191,1205~12
    06

    protein:D:2~209 8,400~411,413,426~430,437~438,
    508~509,511~512,542~547,613,61
    9~620

    protein:E:5~154 6~10,15~16,18~19,560,921~923,1
    069~1070,1072~1073,1078~1081,1
    192,1397~1398

    protein:F:1~101 672~674,710~711,736~739
    protein:G:2~156 932~933,935,938~940,1092,1240~
    1241,1290~1291,1298,1346,1350~
    1351,1373~1374,1376~1380

    protein:H:1~138 586~587,589~591,597~600,640~64
    3,653,753,824~826,828,861,875~
    878

    protein:I:2~128 967,1117~1118,1128~1131,1147~1
    149,1179~1180,1186,1188,1231~1
    233,1248~1251,1291,1342~1343,1
    345~1350,1366~1373

    protein:J:3~100 963~964,969,972~973,1060~1061,
    1123~1125,1150~1153,1189,1198,
    1253~1254,1279~1280,1367~1368

    protein:K:11~129 675~676,683~685,688~692,694~69
    6,706~707,716,718,777~780,1523
    ~1525

    protein:L:5~128 33~37,362~363,501~503,518,520~
    523,525,528~529,537~539,552~55
    3,556,562~564,567~568,879~881,
    910~911,1491~1492

    protein:M:2~119 947~950,952,1224~1229,1296~129
    7,1302,1308~1310,1328~1331

    protein:N:2~61 974,976,979~982,1049,1114~1115
    ,1186~1189,1202~1203,1219,1316
    ~1317,1358~1360

    protein:O:2~89 579~581,656~660,667~668,728~73
    0,739~742,750~752,754~755

    protein:P:1~83 43~44,110,134~136,228~230,310,
    375~377,390~393,449~450,452,46
    3,474,617,624~626

    protein:Q:2~105 127~128,130,190E,234~238,247,2
    53~256,264,267,275~280,564,582
    ,584,636,760~762

    protein:R:16~88 663~664,674,718~720,735~736,83
    5

    protein:S:2~81 957~959,986~987,1013~1014,1220
    ~1223,1227,1310~1314,1317~1318
    ,1320~1322

    protein:T:8~106 102~104,132,177,185~188,190L,1
    91~194,223,259~263,322~324,326
    ,332~333,1438~1439,1453~1455,1
    459

    protein:V:2~25 1235~1236,1243~1244,1267~1269,
    1304~1305,1325~1328,1364
    500 1n53:A

    16 N/A URS000080E0CF N/A synthetic
    construct

    32630
    12547201 Assembly1
    rna:B:17~25 1~5,7,9,13~16
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
  • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218