SEQ2FUN

FURNA
Download all results in tab-seperated text for 19236 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    601 1q86:A
    (3.0Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 12185246 Assembly1
    rna:B:3001~3122 955~958,1011,1013~1015,1084,10
    99,1124,1130~1132
    rna:5:74~76 2541~2542,2588~2590,2618~2620,
    2637
    rna:6:74~76 2104,2284~2286,2485~2486,2637
    protein:C:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1857,1860~1863,1868~1884,
    1898~1900,1939~1944,2114,2123,
    2125,2248~2250,2270~2273,2625,
    2630,2632~2634
    protein:D:1~337 835~837,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2582,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2713~27
    19,2756~2757,2759~2760,2765~27
    68,2806~2810,2815,2817~2822,28
    28,2837~2840,2842~2843,2846~28
    48,2851~2852,2861~2862,2897~28
    99
    protein:E:1~246 34~35,326~330,338~339,447~452,
    454~455,457~459,474~477,642~64
    3,645~647,656~657,663~664,671~
    672,675~678,749~751,762,764~76
    6,890,894,1305~1310,1343~1344,
    1349,1351~1352,1358~1363,2100~
    2101
    protein:F:10~174 2333,2336~2338,2345~2351
    protein:G:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778~2784,2792~
    2793,2796
    protein:H:1~119 243~246,261~264
    protein:I:12~73 1150~1151,1210~1211
    protein:J:1~167 964~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2311,2494~24
    95,2501~2504,2518~2522,2531
    protein:K:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2082,2676~2677,28
    03,2814~2815
    protein:L:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764
    protein:M:1~150 164~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,762,897~905,918~920,924~927,
    1042,1294~1300,1302,1353~1354,
    2430~2432,2441~2444,2452~2454,
    2465~2467
    protein:N:1~194 133~136,145,154~161,170~172,17
    5,181~184,187~195,227,240~244,
    251,259,261,263~266,378~381,38
    3,388~389,391~394,398~404,409,
    417,431~433,435,770~771,869~87
    0,1467,1469~1472,1864,2121~212
    3,2131~2132,2244~2245,2263~226
    4,2266,2273~2275
    protein:O:1~186 962,1010,2353,2368~2369,2413~2
    417
    protein:P:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278
    protein:Q:1~143 792~793,800~802,815~816,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739
    protein:R:1~95 949~953,1018~1019,2295~2300,23
    04~2307,2353~2354,2363~2367,23
    70,2386~2390,2392~2395,2403~24
    04,2423~2424
    protein:S:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,844,1369~1372,14
    28,1431,1689~1690,2048~2055,20
    87~2088,2658~2660,2831~2832,28
    41~2842
    protein:T:1~81 67,1418,1444~1448,1501,1507~15
    08,1673~1676
    protein:U:1~119 30~32,79~82,97,99~101,303,306~
    309,315~318,332~336,342~344,44
    6~448,483~484,486~489
    protein:V:4~56 1810,2721,2755,2864~2866,2890
    protein:W:1~65 56~57,68~69,71~74,93,96
    protein:X:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288
    protein:Y:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2727,2744,2834~2835,
    2856~2857,2895~2896,2904~2905
    protein:Z:95~236 320,521~522,537~541,551~554,55
    6,594~595,617~618,620~623,628~
    629,637~638,905~908,1071~1074,
    1089~1090,1266~1269,1293,1312~
    1313,1315~1317,1324~1331,1333~
    1335,1343~1344,1356,2059
    protein:1:10~82 796~797,818~821,1601,1651~1652
    ,1654,1771~1773,1829~1830,1885
    ~1887
    protein:2:1~56 51,111~113,119~121,148~149,178
    ~179,470~473,772~777,779,845,8
    63~864,881~882,890~892,894,141
    4~1415,1473,1687~1688,1694~169
    5,1836~1837
    protein:3:1~49 53~54,58~61,86~88,120~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91
    protein:4:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1923,1925,2120~2121
    ,2317~2321,2378~2382,2407~2409
    ,2427~2428,2432~2438,2451~2452
    ,2457~2462,2468
    MG:A:8001 2483,2533~2534
    MG:A:8002 627,2483,2534
    MG:A:8003 876~877,2624
    MG:A:8004 456,459
    MG:A:8005 1836,1838~1839
    MG:A:8006 821~822,854
    MG:A:8007 832,1839~1840
    MG:A:8008 919,2464~2465
    MG:A:8009 2611~2612
    MG:A:8010 836,2615
    MG:A:8011 824,854
    MG:A:8013 877,2623
    MG:A:8014 2102,2537
    MG:A:8015 844,1689
    MG:A:8016 1504,1678~1679
    MG:A:8018 1291~1292
    MG:A:8020 1828,1830
    MG:A:8022 2097,2540
    MG:A:8023 2617~2618
    MG:A:8025 1120~1121
    MG:A:8026 2608~2610
    MG:A:8027 240,269
    MG:A:8028 1448,1677
    MG:A:8029 1503,1679
    MG:A:8030 1748~1749
    MG:A:8031 777~778
    MG:A:8033 1747~1749,2585
    MG:A:8034 2302~2303
    MG:A:8041 196,227~228
    MG:A:8042 1309,1346
    MG:A:8043 816~817
    MG:A:8044 2048,2089
    MG:A:8048 2746,2750
    MG:A:8054 162,2276
    MG:A:8057 1883,2012~2013
    MG:A:8061 1369,2650
    MG:A:8062 1489,1491
    MG:A:8064 2277~2278
    MG:A:8066 1872~1873
    MG:A:8067 1845~1846,1884
    MG:A:8070 166,219
    MG:A:8074 1286~1287
    MG:A:8075 907~908
    MG:A:8077 880,883
    MG:A:8079 165,167~168
    MG:A:8080 1684,1724
    MG:A:8081 1420~1421,1438
    MG:A:8086 532~533
    MG:A:8087 682~683
    MG:A:8088 2540,2611
    MG:A:8089 516,518
    MG:A:8093 1070~1071
    MG:A:8094 1096,1257
    MG:A:8096 1848~1849
    MG:A:8097 863~864
    MG:A:8101 2281~2282
    MG:A:8102 2434,2458
    MG:A:8103 2578~2579
    MG:A:8104 2104~2105
    MG:A:8107 1106~1107
    MG:A:8110 903,1357
    MG:A:8117 1840~1841,2022
    K:A:8201 2102,2482,2535~2536
    K:A:8202 162~163,169,172
    NA:A:8301 1068~1069,1072,1087
    NA:A:8302 1119~1121
    NA:A:8303 643~644,904,1354
    NA:A:8305 630~631
    NA:A:8306 2092~2094,2612,2649
    NA:A:8307 40~41,442~443
    NA:A:8308 1394,1432~1433,1724
    NA:A:8310 2577~2579
    NA:A:8311 2523~2525
    NA:A:8313 2389,2399
    NA:A:8314 2541,2607~2608
    NA:A:8315 165~167
    NA:A:8316 896~897
    NA:A:8317 1416~1417
    NA:A:8318 2543~2544
    NA:A:8319 2465~2466
    NA:A:8320 2543,2611,2615
    NA:A:8321 836~837,1736~1737
    NA:A:8323 2112~2113,2475~2476
    NA:A:8324 130,146
    NA:A:8325 776~777,779
    NA:A:8326 1971,2009~2010,2012
    NA:A:8327 821,853~854,1831~1832
    NA:A:8328 56,59~61
    NA:A:8329 66,107~108
    NA:A:8330 140~142
    NA:A:8331 170~171,218,221
    NA:A:8332 386~388,402
    NA:A:8333 1894,1897~1898,1939
    NA:A:8334 1894~1897
    NA:A:8335 621~623,630
    NA:A:8336 1706~1707
    NA:A:8339 2540,2611,2616,2645
    NA:A:8340 1740~1741,2033
    NA:A:8341 681~683
    NA:A:8342 891~893
    NA:A:8344 2663,2811~2812,2816~2817
    NA:A:8349 914~915,1043~1045
    NA:A:8350 623~624,901
    NA:A:8353 1040~1041,1296
    NA:A:8354 768~769,2112
    NA:A:8355 1119,1243
    NA:A:8356 920,2278~2279,2463,2467
    NA:A:8357 941~942,1023~1024
    NA:A:8358 2610~2611
    NA:A:8359 898,922~924,2109
    NA:A:8360 453~454,478~479
    NA:A:8362 167~168,2110~2111,2277
    NA:A:8363 1359~1360
    NA:A:8364 636,2057~2058
    NA:A:8366 544~545,611~612
    NA:A:8367 464,475
    NA:A:8368 798,814~816
    NA:A:8369 391~392,395,398
    NA:A:8370 1832,2022
    NA:A:8371 2492,2529
    NA:A:8372 919,922,924
    NA:A:8373 1576~1577,1618~1620
    NA:A:8374 195~196,415~416
    NA:A:8375 868~869,886~887
    NA:A:8376 632~633,2535~2536,2538~2539
    NA:A:8377 911,1293,1295
    NA:A:8378 762,902~903
    NA:A:8379 831~833
    NA:A:8381 2585~2587,2592
    NA:A:8382 2772~2773
    NA:A:8385 1077,1079
    NA:J:8309 1133~1134
    NA:N:8365 391~392,398~399
    NA:S:8338 2659~2660
    NA:U:8343 308,335,342
    CL:A:8513 1300,1329
    CL:A:8517 594~595
    CL:A:8522 1072,1087
    PHA:5:77 2486~2487,2620
    602 1q86:B
    (3.0Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003592C7 RF00001 Haloarcula
    marismortui
    2238    		 12185246 Assembly1
    rna:A:10~2914 3080~3083,3087,3091,3100~3101,
    3103~3105
    protein:F:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059
    protein:O:1~186 3004~3008,3010~3011,3013~3014,
    3026~3028,3034~3037,3046~3052,
    3068,3114,3117~3119
    protein:R:1~95 3008~3009,3011
    protein:X:1~154 3084~3088,3097~3099
    MG:B:8095 3021,3056~3057
    NA:B:8383 3021~3022,3055,3057~3058
    603 1q8n:A

    		 38 N/A URS000080DE28 N/A synthetic
    construct
    32630    		 14695514 Assembly1
    MGR:A:39 7~8,24,28~30
    604 1q93:A
    (2.25Å)
    		 27 N/A URS000080DDB7 N/A synthetic
    construct
    32630    		 14627814
    605 1q93:B
    (2.25Å)
    		 27 N/A URS000080DDB7 N/A synthetic
    construct
    32630    		 14627814
    606 1q93:C
    (2.25Å)
    		 27 N/A URS000080DDB7 N/A synthetic
    construct
    32630    		 14627814 Assembly3
    NA:C:100 13~14,16~18
    SO4:C:104 15~16
    SO4:C:105 27~28
    607 1q96:A
    (1.75Å)
    		 27 N/A URS000080E1CA N/A synthetic
    construct
    32630    		 14627814 Assembly1
    SO4:A:314 23~24
    608 1q96:B
    (1.75Å)
    		 27 N/A URS000080E1CA N/A synthetic
    construct
    32630    		 14627814
    609 1q96:C
    (1.75Å)
    		 27 N/A URS000080E1CA N/A synthetic
    construct
    32630    		 14627814
    610 1q9a:A
    (1.04Å)
    		 27 N/A URS000080E28F N/A synthetic
    construct
    32630    		 14627814
    611 1qa6:C
    (2.8Å)
    		 58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E180 RF02541
    RF02540    		 Escherichia
    coli
    562    		 10325228 Assembly1
    protein:A:6~72 108~114,126~127,130~132
    612 1qa6:D
    (2.8Å)
    		 58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E180 RF02541
    RF02540    		 Escherichia
    coli
    562    		 10325228 Assembly2
    protein:B:6~72 108~114,126~127,130~132
    613 1qbp:A
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly1
    rna:B:16~30 2~8,10~15
    614 1qbp:B
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly1
    rna:A:1~15 17~23,25~30
    615 1qbp:C
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly2
    rna:D:46~60 32~38,40~45
    616 1qbp:D
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly2
    rna:C:31~45 47~53,55~60
    617 1qbp:E
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly3
    rna:F:76~90 62~68,70~75
    618 1qbp:F
    (2.1Å)
    		 15 N/A URS000080DD59 N/A synthetic
    construct
    32630    		 10504226 Assembly3
    rna:E:61~75 77~90
    619 1qc0:B
    (1.55Å)
    		 10 N/A URS000080E289 N/A Escherichia
    coli
    562    		 10555960 Assembly1
    rna:A:11~19 20~28
    620 1qc0:C
    (1.55Å)
    		 19 N/A URS000080DE9E N/A Escherichia
    coli
    562    		 10555960 Assembly2
    rna:D:120~138 101~119
    621 1qc0:D
    (1.55Å)
    		 19 N/A URS000080DFF8 N/A Escherichia
    coli
    562    		 10555960 Assembly2
    rna:C:101~119 120~138
    622 1qc8:A

    		 25 N/A URS000080DF33 N/A Homo
    sapiens
    9606    		 10393977
    M325_0.6

    M175_0.6
    623 1qcu:A
    (1.2Å)
    		 11 N/A URS000080E243 N/A synthetic
    construct
    32630    		 10555960 Assembly1
    rna:B:12~22 1~11
    624 1qcu:B
    (1.2Å)
    		 11 N/A URS000080DF74 N/A synthetic
    construct
    32630    		 10555960 Assembly1
    rna:A:1~11 12~22
    625 1qcu:C
    (1.2Å)
    		 11 N/A URS000080DF74 N/A synthetic
    construct
    32630    		 10555960 Assembly2
    rna:D:112~122 101~111
    626 1qcu:D
    (1.2Å)
    		 11 N/A URS000080E243 N/A synthetic
    construct
    32630    		 10555960 Assembly2
    rna:C:101~111 112~122
    627 1qd3:A

    		 29 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS000080DFB8 RF00250 Human
    immunodeficiency
    virus
    1
    11676    		 10747964 Assembly1
    RIB:B:1 21,23
    BDG:A:46 22~24,26,41
    CYY:A:47 21,23,42~43
    628 1qd7:A
    (5.5Å)
    		 271 N/A N/A N/A Thermus
    thermophilus
    274    		 10476960
    629 1qd7:B
    (5.5Å)
    		 88 N/A N/A N/A Thermus
    thermophilus
    274    		 10476960
    630 1qf6:B
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000022C879 RF00005 Escherichia
    coli
    562    		 10319817 Assembly1
    protein:A:2 1~4,32~39,66~67,69~76
    631 1qfq:A

    		 15 N/A URS000080E1C6 N/A synthetic
    construct
    32630    		 10759866 Assembly1
    protein:B:2~36 2~9,12
    632 1qrs:B
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,10~14,25,27,34~38,69,71~76
    633 1qrt:B
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,11~14,25,27,34~38,69,71~76
    634 1qru:B
    (3.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,11~14,25,27,34~38,72~76
    635 1qtq:B
    (2.25Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 9562563 Assembly1
    protein:A:8 902~907,911~914,916,925,934~93
    8,971~976
    636 1qu2:T
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E234 RF00005 Staphylococcus
    aureus
    1280    		 10446055 Assembly1
    protein:A:1~917 3~5,11~13,23~25,31~35,37~42,68
    ~72,74
    K:T:301 32~33,36,38~39
    MG:T:1206 8~9
    MG:T:1207 16,19,59~60
    MG:T:1209 48,50
    637 1qu3:T
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E234 RF00005 Staphylococcus
    aureus
    1280    		 10446055 Assembly1
    protein:A:2 1,3~5,10~13,23~25,31~43,68~74
    638 1qvf:0
    (3.1Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 14561884 Assembly1
    rna:9:3001~3122 955~958,1011~1015,1084,1099,11
    24,1130~1132
    rna:3:1~76 2431,2459~2460
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1857,1860~1863,
    1868~1884,1898~1900,1939~1944,
    2114,2123,2125,2248~2250,2270~
    2273,2630,2632~2634
    protein:B:1~337 835~837,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2582,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2707,27
    13~2719,2756~2757,2759~2760,27
    65~2768,2806~2810,2815,2818~28
    22,2828,2837~2840,2842~2843,28
    46~2848,2851~2853,2861~2862,28
    97~2899
    protein:C:1~246 34~35,326~330,338~339,347,447~
    452,454~455,457~459,474~477,64
    2,645~647,656~657,663~664,671~
    672,674~678,749~751,762,764~76
    6,890,894,1305~1310,1342~1344,
    1351~1352,1358~1363,2100~2101
    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778~2784,2792~
    2793,2796
    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~167 964~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2312,2494~24
    95,2501~2504,2518~2522,2531
    protein:I:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65,2081~2082,2676~2677,2803,28
    14~2815
    protein:J:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764
    protein:K:1~150 165~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,762,897~905,918,920,924~927,
    1042,1294~1300,1302,1353~1354,
    2430~2432,2441~2444,2452~2454,
    2465~2467
    protein:L:1~194 133~136,145,154~161,170~172,17
    5,181~184,187~195,206,227,240~
    244,251,259,261,263~266,378~38
    1,383,388~389,391~394,398~404,
    409,417,431~433,435,770~771,86
    9~870,1467,1469~1472,1864,2121
    ~2123,2131~2132,2244~2245,2263
    ~2264,2266,2273~2275
    protein:M:1~186 962,1010,2353,2368~2369,2413~2
    417
    protein:N:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278
    protein:O:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739
    protein:P:1~95 948~953,1018~1019,2295~2300,23
    04~2307,2353,2363~2367,2370,23
    86~2390,2392~2395,2403~2404,24
    23~2424
    protein:Q:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,843~844,1369~137
    3,1428,1431,1689~1690,2048~205
    5,2087~2089,2658~2660,2831~283
    2,2841~2843
    protein:R:1~81 67,1418,1444~1448,1501,1507~15
    08,1673~1676
    protein:S:1~119 30~32,79~82,97,99~101,303,306~
    309,315~318,332~336,342~344,44
    6~448,483~484,486~489
    protein:T:4~56 1810,2721,2755,2864~2866,2890
    protein:U:1~65 57,68~69,71~74,91~93,96
    protein:V:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288
    protein:W:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2727,2744,2834~2835,
    2856~2857,2895~2896,2904~2905
    protein:X:95~236 320,521~522,537~541,551~554,59
    4~595,617~618,620~623,628~629,
    637~638,905~908,1071~1074,1089
    ~1090,1266~1269,1293,1311~1313
    ,1315~1317,1325~1331,1333~1335
    ,1343,1356,2059
    protein:Y:10~82 796~797,818,820~821,1601,1651~
    1652,1654,1771~1773,1829~1830,
    1885~1887
    protein:Z:1~56 51,111~113,119~121,148~149,178
    ~179,182,470~473,772~779,845,8
    63~864,881~882,890~892,894,141
    4~1415,1473,1687~1688,1695,183
    6~1837
    protein:1:1~49 53~54,58~61,86~88,121~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91
    protein:2:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1925,2120~2121,2317
    ~2320,2378~2379,2381~2382,2407
    ~2409,2427~2428,2432~2438,2450
    ~2452,2457~2462,2468
    MG:0:8001 2483,2533~2534
    MG:0:8002 627,2483,2534
    MG:0:8003 876~877,2624
    MG:0:8004 456,459
    MG:0:8005 1836,1838~1839
    MG:0:8006 821~822,854
    MG:0:8007 832,1839~1840
    MG:0:8008 919,2464~2465
    MG:0:8009 2611~2612
    MG:0:8010 836,2615
    MG:0:8011 824,854
    MG:0:8013 877,2623
    MG:0:8014 2102,2537
    MG:0:8015 844,1689
    MG:0:8016 1504,1678~1679
    MG:0:8018 1291~1292
    MG:0:8020 1828,1830
    MG:0:8022 2097,2540
    MG:0:8023 2617~2618
    MG:0:8025 1120~1121
    MG:0:8026 2608~2610
    MG:0:8027 240,269
    MG:0:8028 1448,1677
    MG:0:8029 1503,1679
    MG:0:8030 1748~1749
    MG:0:8031 777~778
    MG:0:8033 1747~1749,2585
    MG:0:8034 2302~2303
    MG:0:8041 196,227~228
    MG:0:8042 1309,1346
    MG:0:8043 816~817
    MG:0:8044 2048,2089
    MG:0:8048 2746,2750
    MG:0:8049 2421,2423
    MG:0:8054 162,2276
    MG:0:8057 1883,2012~2013
    MG:0:8061 1369,2650
    MG:0:8062 1489,1491
    MG:0:8064 2277~2278
    MG:0:8067 1845~1846,1884
    MG:0:8070 166,219
    MG:0:8074 1286~1287
    MG:0:8075 907~908
    MG:0:8077 880,883
    MG:0:8079 165,167~168
    MG:0:8080 1684,1724
    MG:0:8081 1420~1421,1438
    MG:0:8084 1742~1743
    MG:0:8086 532~533
    MG:0:8087 682~683
    MG:0:8088 2540,2611
    MG:0:8089 516~518
    MG:0:8093 1070~1071
    MG:0:8094 1096,1257
    MG:0:8096 1848~1849
    MG:0:8097 863~864
    MG:0:8101 2281~2282
    MG:0:8102 2434,2458
    MG:0:8103 2578~2579
    MG:0:8104 2104~2105
    MG:0:8107 1106~1107
    MG:0:8110 903,1357
    MG:0:8117 1840~1841,2022
    K:0:8201 2102,2482,2535~2536
    K:0:8202 162~163,172
    NA:0:8301 1068~1069,1072,1087
    NA:0:8302 1119~1121
    NA:0:8303 643~644,904,1354
    NA:0:8305 630~631
    NA:0:8306 2092~2094,2612,2649
    NA:0:8307 40~41,442~443
    NA:0:8308 1394,1432~1433,1724
    NA:0:8310 2577~2579
    NA:0:8311 2523~2525
    NA:0:8314 2541,2607~2608
    NA:0:8315 165~167
    NA:0:8316 896~897
    NA:0:8317 1416~1417
    NA:0:8318 2543~2544
    NA:0:8319 2465~2466
    NA:0:8320 2542~2544,2611,2615
    NA:0:8321 836~837,1736~1737
    NA:0:8323 885,2112~2113,2475~2476
    NA:0:8324 130,146
    NA:0:8325 776~777,779
    NA:0:8326 1971,2009~2010,2012
    NA:0:8327 821,853~854,1831~1832
    NA:0:8328 56,59~61
    NA:0:8329 66,107~108
    NA:0:8330 140~142
    NA:0:8331 170~171,218~219,221
    NA:0:8332 386~388,402
    NA:0:8333 1894,1897~1898,1939
    NA:0:8334 1894~1897
    NA:0:8335 621~623,628,630
    NA:0:8336 1706~1707
    NA:0:8339 2540,2611,2616,2645
    NA:0:8340 1740~1741,2033
    NA:0:8341 681~683
    NA:0:8342 891~893
    NA:0:8343 308,335,342
    NA:0:8344 2663,2811~2812,2816~2817
    NA:0:8349 914~915,1043~1045
    NA:0:8350 623~624,901
    NA:0:8353 1040~1041,1296
    NA:0:8354 768~769,2112
    NA:0:8355 1119,1243
    NA:0:8356 920,2278~2279,2463,2467
    NA:0:8357 941~942,1023~1024
    NA:0:8359 898,922~924,2109
    NA:0:8360 453~454,478~479
    NA:0:8362 167~168,2110~2111,2277
    NA:0:8363 1359~1360
    NA:0:8364 636,2057~2058
    NA:0:8365 391~392,398~399
    NA:0:8366 544~545,611~612
    NA:0:8367 464,475
    NA:0:8368 798,814~816
    NA:0:8369 391~392,395,398
    NA:0:8370 1832,2022
    NA:0:8371 2492,2528~2529
    NA:0:8372 919,922,924
    NA:0:8373 1576~1577,1618~1619
    NA:0:8374 195~196,415~416
    NA:0:8375 868~869,886~887
    NA:0:8376 633,2535~2536,2538~2539
    NA:0:8377 911,1293,1295
    NA:0:8378 762,902~903
    NA:0:8379 831~832
    NA:0:8381 2585~2587,2592
    NA:0:8382 2772~2773
    NA:0:8385 1077,1079
    NA:H:8309 1133~1134
    NA:Q:8338 2659~2660
    CL:0:8513 1300,1329
    CL:0:8517 594~595
    CL:0:8522 1072,1087
    639 1qvf:3
    (3.1Å)
    		 12 N/A URS000080DF92 N/A synthetic
    construct
    32630    		 14561884 Assembly1
    protein:2:1~92 74~76
    640 1qvf:9
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003592C7 RF00001 Haloarcula
    marismortui
    2238    		 14561884 Assembly1
    rna:0:10~2914 3080~3083,3087,3091,3100~3101,
    3103~3105
    protein:D:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059
    protein:M:1~186 3004~3008,3010~3011,3013~3014,
    3027~3028,3034~3037,3046,3048~
    3052,3068,3114,3117~3119
    protein:P:1~95 3008~3009,3011,3069
    protein:V:1~154 3084~3088,3097~3099
    MG:9:8095 3021,3056~3057
    NA:9:8383 3021~3022,3055,3057~3058
    641 1qvg:0
    (2.9Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 14561884 Assembly1
    rna:9:3001~3122 955~958,1011~1015,1084,1099,11
    24,1130~1132
    rna:3:74~76 2431,2459~2460
    rna:4:74~76 2104,2284~2286,2485~2486,2637
    rna:5:74~76 2541~2542,2588~2590,2618~2619,
    2637
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1856,1860~1863,
    1868~1884,1898~1900,1939~1944,
    2114,2123,2125~2126,2248,2250,
    2270~2273,2625,2630,2632~2634
    protein:B:1~337 835,1234,1732~1736,1751,1753~1
    754,2034~2036,2038~2039,2065~2
    066,2090~2094,2545~2549,2580~2
    583,2591,2606~2607,2609~2610,2
    613~2616,2653~2658,2669~2674,2
    678~2679,2681~2682,2707,2714~2
    719,2756~2757,2759~2760,2765~2
    768,2807~2810,2817~2822,2837~2
    840,2842,2846~2848,2851~2853,2
    861~2862,2897~2898
    protein:C:1~246 34~35,326~330,338~339,347,447~
    452,454~455,457~459,474~477,64
    2,645~647,656~657,663~664,671~
    672,674~678,749~751,762,764~76
    6,890,894,1305~1310,1343~1344,
    1351~1352,1358~1363,2100~2101
    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778,2780~2784,
    2792~2793,2796
    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~167 964~968,1002~1008,1053~1056,11
    34,2282~2283,2309~2311,2494~24
    95,2501~2504,2518~2522,2531
    protein:I:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65,2081~2083,2676~2677,2803,28
    14~2815
    protein:J:1~132 1742~1745,1747,1992~1994,2035~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764
    protein:K:1~150 164~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,897~905,918~920,924~927,1042
    ,1294~1300,1302,1353~1354,2430
    ~2432,2441~2444,2452~2454,2466
    ~2467
    protein:L:1~194 133~136,145,154~161,170~172,17
    5,181~184,187~195,206,227,240~
    244,251,261,263~266,378~381,38
    3,388~394,398~404,409,417,431~
    433,435,770~771,869,1467,1469~
    1472,1864,2121~2123,2131~2132,
    2244~2245,2263~2264,2266,2273~
    2275
    protein:M:1~186 962,1010,2353,2368~2369,2413~2
    417
    protein:N:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278
    protein:O:1~143 792~793,800~802,815~816,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739
    protein:P:1~95 949~953,1018~1019,2295~2300,23
    04~2307,2353~2354,2363~2367,23
    70,2386~2390,2392~2395,2403~24
    04,2423~2424
    protein:Q:1~150 11~12,19~22,492,499~501,523~52
    6,840~841,843~844,1369~1373,14
    28,1431,1689~1690,2048~2055,20
    87~2088,2658~2660,2831~2832,28
    41~2843
    protein:R:1~81 67~68,1418,1444~1448,1501,1507
    ~1508,1673~1676
    protein:S:1~119 30~32,79~82,97,99~101,303,306~
    309,315~318,332~336,342~344,44
    6~448,483~484,486~489
    protein:T:4~56 1810,2721,2755,2864~2866,2890
    protein:U:1~65 56~57,68~69,71~74,91~93,96
    protein:V:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1094~
    1099,1262~1264,1285~1288
    protein:W:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2727,2744,2834~2835,
    2856~2857,2895~2896,2904~2905
    protein:X:95~236 320,521~522,537~541,552~554,55
    6,594~595,617~618,620~623,628~
    629,637~638,905~908,1071~1074,
    1089~1090,1260,1266~1269,1293,
    1311~1313,1315~1317,1324~1331,
    1333~1335,1343,1356
    protein:Y:10~82 796~797,818~821,1601,1651~1652
    ,1654,1771~1773,1829,1885~1887
    protein:Z:1~56 51,111~113,119~121,148~149,178
    ~179,470~473,772~779,845,863~8
    64,881~882,890~892,894,1414~14
    15,1473,1687~1688,1694~1695,18
    36~1837
    protein:1:1~49 53~54,58~61,86~88,120~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91
    protein:2:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1925,2120~2122,2317
    ~2321,2378~2382,2407~2409,2427
    ~2428,2432~2437,2450~2452,2457
    ~2462,2468
    MG:0:8001 2483,2533~2534
    MG:0:8002 627,2483,2534
    MG:0:8003 876~877,2624
    MG:0:8004 456,459
    MG:0:8005 1836,1838~1839
    MG:0:8006 821~822,854
    MG:0:8007 832,1839~1840
    MG:0:8008 919,2464~2465
    MG:0:8009 2611~2612
    MG:0:8010 836,2615
    MG:0:8011 824,854
    MG:0:8013 877,2623
    MG:0:8014 2102,2537
    MG:0:8015 844,1689
    MG:0:8016 1504,1678~1679
    MG:0:8018 1291~1292
    MG:0:8022 2097,2540
    MG:0:8023 2617~2618
    MG:0:8025 1120~1121
    MG:0:8026 2608~2610
    MG:0:8027 240,269
    MG:0:8028 1448,1677
    MG:0:8029 1503,1679
    MG:0:8030 1748~1749
    MG:0:8031 777~778
    MG:0:8033 1747~1749,2585
    MG:0:8034 2302~2303
    MG:0:8041 196,227~228
    MG:0:8042 1309,1346
    MG:0:8043 816~817
    MG:0:8044 2048,2089
    MG:0:8048 2746,2750
    MG:0:8057 1883,2012~2013
    MG:0:8060 224,393
    MG:0:8061 1369,2650
    MG:0:8062 1489,1491
    MG:0:8064 2277~2278
    MG:0:8067 1845~1846,1884
    MG:0:8070 166,219
    MG:0:8074 1286~1287
    MG:0:8075 907~908
    MG:0:8077 880,883
    MG:0:8079 165,167~168
    MG:0:8080 1684,1724
    MG:0:8081 1420~1421,1438
    MG:0:8086 532~533
    MG:0:8087 682~683
    MG:0:8088 2540,2611
    MG:0:8089 516~517
    MG:0:8093 1070~1071
    MG:0:8096 1848~1849
    MG:0:8097 863~864
    MG:0:8101 2281~2282
    MG:0:8102 2434,2458
    MG:0:8103 2578~2579
    MG:0:8107 1106~1107
    MG:0:8110 903,1357
    MG:0:8117 1840~1841,2022
    K:0:8201 2102,2482,2535~2536
    K:0:8202 162~163,169,172
    NA:0:8301 1069,1072,1087
    NA:0:8302 1119~1122
    NA:0:8303 643,904,1353~1354
    NA:0:8305 630~631
    NA:0:8306 2092~2094,2612,2649
    NA:0:8307 40~41,442~443
    NA:0:8308 1394,1432~1433,1724
    NA:0:8310 2577~2579
    NA:0:8311 2523~2525
    NA:0:8314 2541,2607
    NA:0:8315 165~167
    NA:0:8316 896~897
    NA:0:8317 1416~1417
    NA:0:8318 2543~2544
    NA:0:8319 2465~2466
    NA:0:8320 2543~2544,2611,2615
    NA:0:8321 836~837,1736~1737
    NA:0:8323 885,2112~2113,2475
    NA:0:8324 130,146
    NA:0:8325 776~777,779
    NA:0:8326 1971,2009~2010,2012
    NA:0:8327 821,853~854,1831~1832
    NA:0:8328 56,59~61
    NA:0:8329 66,107~108
    NA:0:8330 140~142
    NA:0:8331 170~171,218~219,221
    NA:0:8332 386~388,402
    NA:0:8333 1894,1897~1898,1939
    NA:0:8334 1894~1897
    NA:0:8335 621~623,630
    NA:0:8336 1706~1707
    NA:0:8339 2540,2611,2616,2645
    NA:0:8340 1740~1741,2033
    NA:0:8341 681~683
    NA:0:8342 891~893
    NA:0:8343 308,335,342
    NA:0:8344 2663,2811~2812,2816~2817
    NA:0:8349 914~915,1043~1045
    NA:0:8350 623~624,901
    NA:0:8352 955~956
    NA:0:8353 1040~1041,1295~1296
    NA:0:8354 768~769,2112
    NA:0:8355 1119,1243
    NA:0:8356 920,2278,2463,2467
    NA:0:8357 941~942,1023~1024
    NA:0:8359 898,922~924,2109
    NA:0:8360 453~454,478~479
    NA:0:8362 167,2110~2111,2277
    NA:0:8363 1359~1360
    NA:0:8364 636,2057~2058
    NA:0:8365 391~392,398~399
    NA:0:8366 544~545,610~612
    NA:0:8367 464,475
    NA:0:8368 798~799,814~816
    NA:0:8369 391~392,395
    NA:0:8370 1832,2022
    NA:0:8371 2492,2528~2529
    NA:0:8372 919,922,924
    NA:0:8373 1576~1577,1618~1620
    NA:0:8374 195~196,415~416
    NA:0:8375 868~869,886~887
    NA:0:8376 633,2535~2536,2538~2539
    NA:0:8377 911,1293~1295
    NA:0:8378 762,902~903
    NA:0:8379 831~833,850
    NA:0:8381 2585~2587,2592
    NA:0:8382 2772~2773
    NA:0:8385 1077,1079
    NA:H:8309 1133~1134
    NA:Q:8338 2659~2660
    NA:Q:8386 12,2087
    CL:0:8505 201~202
    CL:0:8517 594~595
    CL:0:8522 1072,1087,1291
    642 1qvg:9
    (2.9Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003592C7 RF00001 Haloarcula
    marismortui
    2238    		 14561884 Assembly1
    rna:0:10~2914 3080~3083,3087,3091,3100~3101,
    3103~3105
    protein:D:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053~3054,3056~3059
    protein:M:1~186 3004~3008,3010~3011,3013~3014,
    3027~3028,3034~3037,3046~3052,
    3068~3069,3114,3117~3119
    protein:P:1~95 3008~3009,3011,3069
    protein:V:1~154 3084~3088,3097~3099
    MG:9:8095 3021,3056~3057
    NA:9:8383 3021,3055,3057~3059
    643 1qwa:A

    		 21 N/A URS000080E24B N/A Mus
    musculus
    10090    		 14602904
    644 1qwb:A

    		 26 N/A URS000080DF7C N/A synthetic
    construct
    32630    		 14602904
    645 1qza:B
    (10.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF23 RF00005 Escherichia
    coli
    562    		 14566331
    646 1qzb:B
    (9.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 14566331
    647 1qzc:A
    (9.0Å)
    		 44 N/A URS000080E2E8 N/A Escherichia
    coli
    562    		 14566331
    648 1qzc:B
    (9.0Å)
    		 20 N/A URS000080DEE4 N/A Escherichia
    coli
    562    		 14566331
    649 1qzc:C
    (9.0Å)
    		 27 N/A URS000080DF6D N/A Escherichia
    coli
    562    		 14566331
    650 1qzw:B
    (4.1Å)
    		 47 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DFB7 RF01857
    RF00169    		 Saccharolobus
    solfataricus
    2287    		 14657338 Assembly1
    protein:A:1~432 188,196~198,211~213
    651 1qzw:D
    (4.1Å)
    		 47 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DFB7 RF01857
    RF00169    		 Saccharolobus
    solfataricus
    2287    		 14657338 Assembly2
    protein:C:1~432 188,196~198,211~213
    652 1qzw:F
    (4.1Å)
    		 47 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DFB7 RF01857
    RF00169    		 Saccharolobus
    solfataricus
    2287    		 14657338 Assembly3
    protein:E:1~432 188,196~198,211~213
    653 1qzw:H
    (4.1Å)
    		 47 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DFB7 RF01857
    RF00169    		 Saccharolobus
    solfataricus
    2287    		 14657338 Assembly4
    protein:G:1~432 188,196~198,211~213
    654 1r2p:A

    		 34 GO:0000373 (P) Group II intron splicing URS000080DF0B RF00029 Saccharomyces
    cerevisiae
    4932    		 14745440
    655 1r2w:C
    (9.0Å)
    		 57 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E044 RF02540
    RF02541    		 Escherichia
    coli
    562    		 14566331
    656 1r2x:C
    (9.0Å)
    		 57 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E044 RF02540
    RF02541    		 Escherichia
    coli
    562    		 14566331
    657 1r3e:C
    (2.1Å)
    		 17 N/A URS000080DFF6 N/A synthetic
    construct
    32630    		 14566049 Assembly1
    protein:A:10~318 407~418
    658 1r3e:D
    (2.1Å)
    		 17 N/A URS000080DFF6 N/A synthetic
    construct
    32630    		 14566049 Assembly1
    rna:E:404~420 404~408,412~420
    protein:A:10~318 415~417
    659 1r3e:E
    (2.1Å)
    		 17 N/A URS000080DFF6 N/A synthetic
    construct
    32630    		 14566049 Assembly1
    rna:D:404~420 404~408,412~420
    protein:A:10~318 412~413
    660 1r4h:A

    		 10 N/A URS000080DEDA N/A synthetic
    construct
    32630    		 15476802
    661 1r7w:A

    		 34 N/A URS000080DD96 N/A synthetic
    construct
    32630    		 15134450
    662 1r7z:A

    		 34 N/A URS000080DEFA N/A synthetic
    construct
    32630    		 15134450
    663 1r9f:B
    (1.85Å)
    		 20 N/A URS000041F71C N/A synthetic
    construct
    32630    		 14661029 Assembly1
    rna:C:1~20 1~19
    rna:B-2:1~20 1~4,6~13,17~19
    rna:C-2:1~20 1~20
    protein:A:25~148 1~2,12~14
    protein:A-2:25~148 8,11~13,19
    664 1r9f:C
    (1.85Å)
    		 20 N/A URS0000485571 N/A synthetic
    construct
    32630    		 14661029 Assembly1
    rna:B:1~20 1~19
    rna:B-2:1~20 1~20
    rna:C-2:1~20 1~8,12~19
    protein:A:25~148 8,11~13,19
    protein:A-2:25~148 1,12~14
    665 1r9s:R
    (4.25Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 15537538 Assembly1
    dna:T:1~14 4~10
    protein:A:2~1445 3,10
    protein:B:20~1224 1,6,8~10
    666 1r9t:R
    (3.5Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 15537538 Assembly1
    dna:T:1~28 4~10
    protein:A:3~1445 1,10
    protein:B:20~1224 8~9
    667 1raw:A

    		 36 N/A URS000080E162 N/A synthetic
    construct
    32630    		 8756406 Assembly1
    AMP:A:37 7~8,10~11,17~19,30
    668 1rc7:B
    (2.15Å)
    		 10 N/A URS000080E216 N/A synthetic
    construct
    32630    		 15016361 Assembly1
    rna:C:11~20 1~10
    protein:A:1~220 6~8
    669 1rc7:C
    (2.15Å)
    		 10 N/A URS000080E216 N/A synthetic
    construct
    32630    		 15016361 Assembly1
    rna:B:1~10 11~20
    protein:A:1~220 15~18
    670 1rc7:D
    (2.15Å)
    		 10 N/A URS000080E216 N/A synthetic
    construct
    32630    		 15016361 Assembly1
    rna:E:31~40 21~30
    protein:A:1~220 24~29
    671 1rc7:E
    (2.15Å)
    		 10 N/A URS000080E216 N/A synthetic
    construct
    32630    		 15016361 Assembly1
    rna:D:21~30 31~40
    protein:A:1~220 38~40
    672 1rfr:A

    		 30 N/A URS000080E02A N/A Coxsackievirus
    B3
    12072    		 14962384
    673 1rht:A

    		 24 N/A URS000080DD26 N/A synthetic
    construct
    32630    		 7756280
    674 1rkj:B

    		 21 N/A URS000080E24B N/A Mus
    musculus
    10090    		 15033352 Assembly1
    protein:A:1~175 8~14
    675 1rlg:C
    (2.7Å)
    		 25 N/A URS000080DE2D N/A synthetic
    construct
    32630    		 15130473 Assembly1
    protein:A:7~119 4~6,8,16~19
    676 1rlg:D
    (2.7Å)
    		 25 N/A URS000080DE2D N/A synthetic
    construct
    32630    		 15130473 Assembly2
    protein:B:2~118 5~8,16~19
    677 1rmn:A

    		 49 N/A URS000080E2BD N/A synthetic
    construct
    32630    		 7973630
    678 1rna:A
    (2.25Å)
    		 14 N/A URS000080E07D N/A synthetic
    construct
    32630    		 2479753 Assembly1
    rna:B:15~28 1~14
    679 1rna:B
    (2.25Å)
    		 14 N/A URS000080E07D N/A synthetic
    construct
    32630    		 2479753 Assembly1
    rna:A:1~14 15~28
    680 1rng:A

    		 12 N/A URS000080E1E2 N/A synthetic
    construct
    32630    		 7578046
    681 1rnk:A

    		 34 N/A URS000080DFBE N/A synthetic
    construct
    32630    		 7723043
    682 1roq:A

    		 14 N/A URS000080E2CE N/A synthetic
    construct
    32630    		 12693932
    683 1rpu:C
    (2.5Å)
    		 21 N/A URS000080DDEE N/A synthetic
    construct
    32630    		 14697199 Assembly1
    rna:D:1~21 1~19
    protein:A:9~152 9~13,19~21
    protein:B:8~149 1~2,12~14
    684 1rpu:D
    (2.5Å)
    		 21 N/A URS000080DDEE N/A synthetic
    construct
    32630    		 14697199 Assembly1
    rna:C:1~21 1~19
    protein:A:9~152 1~2,12~14
    protein:B:8~149 8~13,19~21
    685 1rrd:A

    		 10 N/A URS000080E30E N/A synthetic
    construct
    32630    		 9425027 Assembly1
    dna:B:1~10 1~10
    686 1rrr:A

    		 10 N/A URS000080E30E N/A synthetic
    construct
    32630    		 9425027 Assembly1
    rna:B:1~10 1~10
    687 1rrr:B

    		 10 N/A URS000080DFE7 N/A synthetic
    construct
    32630    		 9425027 Assembly1
    rna:A:1~10 1~10
    688 1ry1:A
    (12.0Å)
    		 128 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DE1E RF00017
    RF01856    		 Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:Q:100~111 112,239
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:326~434 184~185,192~195,207~208
    689 1ry1:E
    (12.0Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0035195 (P) miRNA-mediated post-tra...
    GO:0005786 (C) signal recognition part...
    GO:0016442 (C) RISC complex    		 URS000080E0CE RF00017
    RF04277    		 Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:M:49~75 101,104,106,121~124,148
    rna:N:271~301 104~105,125~127,148
    protein:C:5~75 121~124
    protein:D:2~95 119,121,123~129
    690 1ry1:M
    (12.0Å)
    		 27 N/A URS000080DEAE N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:E:100~148 49,57~58
    rna:N:271~301 49~52,54~55,57~64,68~69,71~74
    protein:C:5~75 55~57
    691 1ry1:N
    (12.0Å)
    		 31 N/A URS000080DF80 N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:E:100~148 290~293,298
    rna:M:49~75 271~274,276~277,280,282~287,29
    0~292,294~297
    692 1ry1:O
    (12.0Å)
    		 24 N/A URS000080E1C0 N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:P:252~270 79~83,85~91,93~97
    693 1ry1:P
    (12.0Å)
    		 19 N/A URS000080DFDD N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:O:76~99 253~264,266~270
    rna:Q:100~111 252~253
    694 1ry1:Q
    (12.0Å)
    		 12 N/A URS000080DE07 N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:P:252~270 101~102
    rna:R:240~251 102~103,105~109
    695 1ry1:R
    (12.0Å)
    		 12 N/A URS000080DE5B N/A Canis
    lupus
    familiaris
    9615    		 14985753 Assembly1
    rna:A:112~239 240,242
    rna:Q:100~111 244~250
    696 1s03:A
    (2.7Å)
    		 47 N/A URS000080DD97 N/A synthetic
    construct
    32630    		 15146079 Assembly1
    protein:H:3~129 12~16,28,30~31,38~40
    697 1s03:B
    (2.7Å)
    		 47 N/A URS000080DD97 N/A synthetic
    construct
    32630    		 15146079 Assembly2
    protein:G:4~129 12~16,28~31,37~40
    698 1s2f:A

    		 23 N/A URS000080E1C4 N/A synthetic
    construct
    32630    		 15317975
    699 1s34:A

    		 23 N/A URS000080E1C4 N/A synthetic
    construct
    32630    		 15317975
    700 1s72:0
    (2.4Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 15184028 Assembly1
    rna:9:1~122 955~958,1011~1015,1084,1099,11
    24,1130~1132
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1857,1860~1863,
    1868~1884,1898~1900,1938~1944,
    2114,2123,2125,2248~2250,2270,
    2272~2273,2630,2632~2634
    protein:B:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2582,2591,2606~2607,2609~26
    10,2613~2616,2653~2658,2669~26
    74,2678~2679,2681~2682,2713~27
    19,2756~2757,2759~2760,2765~27
    68,2806~2810,2815,2818~2822,28
    28,2837~2840,2842~2843,2846~28
    48,2851~2852,2861~2862,2897~28
    98
    protein:C:1~246 34~35,327~330,338~339,447~452,
    454~455,457~459,474~477,642,64
    5~647,656~657,663~664,671~672,
    674~678,749~751,762,764~766,89
    0,894,1305~1310,1342~1344,1348
    ,1351~1352,1359~1363,2100~2101
    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2561,2565~2567,2690,2694~
    2695,2704~2705,2778~2784,2792~
    2794,2796
    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~171 964~969,1002~1008,1053~1056,11
    34~1135,2282~2283,2309~2312,24
    94~2495,2501~2504,2518~2522,25
    31
    protein:I:71~140 1162~1164,1167~1168,1180,1183~
    1186,1192
    protein:J:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2083,2676~2677,28
    03,2814~2815
    protein:K:1~132 1742~1745,1747,1992~1994,2036~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2720~2721,2762~2764
    protein:L:1~150 164~166,196,215~216,220~223,41
    7,623~625,644~645,688,692~694,
    697~700,745,754~755,757~759,76
    2,897~904,918~920,924~927,1041
    ~1042,1294~1300,1302,1353~1354
    ,2430~2432,2441~2444,2452~2454
    ,2465~2467
    protein:M:1~194 133~137,145,154~161,170~172,17
    5,181~183,188~192,194~195,204,
    206,227,241~244,251,259,261,26
    3~266,378~381,388~389,391~394,
    398~404,417,431~433,770~771,14
    67,1469~1472,1864,2121~2123,21
    31~2132,2244~2245,2263~2264,22
    66,2273~2275
    protein:N:1~186 962,1010,2353,2368,2413~2417
    protein:O:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278
    protein:P:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739
    protein:Q:1~95 948~953,1018~1019,2295~2297,22
    99~2300,2304~2307,2353,2363~23
    67,2370,2386~2390,2392~2395,24
    03~2404,2423~2424
    protein:R:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,843~844,1369~137
    3,1428,1431,1689~1690,2048~205
    5,2087~2088,2658~2660,2831~283
    2,2841~2843
    protein:S:1~81 67,1418,1444~1448,1501,1507~15
    08,1673~1676
    protein:T:1~119 30~32,79~82,87,97,99~101,303,3
    06,308~309,315~318,332~336,342
    ~344,446~448,483~484,486~489
    protein:U:4~56 1810,2721,2755,2864~2866,2890
    protein:V:1~65 57,68~69,72~74,91~93,96
    protein:W:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288
    protein:X:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2726~2727,2744,2834~
    2835,2856~2857,2895~2896,2904~
    2905
    protein:Y:95~236 320,521~522,537~541,551~554,59
    4~595,617~618,620~623,628~629,
    637~638,905~908,1071~1074,1089
    ~1090,1266~1269,1293,1311~1313
    ,1315~1317,1325~1331,1333~1335
    ,1343,1356
    protein:Z:10~82 796~797,818~821,1601~1602,1604
    ,1651~1652,1654,1771~1773,1829
    ~1830,1885~1887
    protein:1:1~56 51,111~113,119~121,148~149,178
    ~179,182,470~473,772~779,845,8
    63~864,881~882,890~892,894,141
    4~1415,1473,1687~1688,1695,183
    6~1837
    protein:2:1~49 53~54,58~61,86~88,120~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91
    protein:3:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1923,1925,2120~2121
    ,2317~2320,2378~2379,2381~2382
    ,2407~2409,2427~2428,2432~2438
    ,2451~2452,2457~2462,2468
    MG:0:8001 2483,2533~2534
    MG:0:8002 627,2483,2534
    MG:0:8003 876~877,2624
    MG:0:8004 456,459
    MG:0:8005 1836,1838~1839
    MG:0:8006 821~822,854
    MG:0:8007 832,1839~1840
    MG:0:8008 919,2464~2465
    MG:0:8009 2611~2612
    MG:0:8010 836,2615
    MG:0:8011 824,854
    MG:0:8013 877,2623
    MG:0:8014 2102,2537
    MG:0:8015 844,1689
    MG:0:8016 1504,1678~1679
    MG:0:8018 1291~1292
    MG:0:8022 2097,2540
    MG:0:8023 2617~2618
    MG:0:8025 1120~1121
    MG:0:8026 2608~2610
    MG:0:8027 240,269
    MG:0:8028 1448,1677
    MG:0:8029 1503,1679
    MG:0:8030 1748~1749
    MG:0:8031 777~778
    MG:0:8033 1747~1749,2585
    MG:0:8034 2302~2303
    MG:0:8041 196,227~228
    MG:0:8042 1309,1346
    MG:0:8043 816~817
    MG:0:8044 2048,2089
    MG:0:8048 2746,2750
    MG:0:8049 2421,2423
    MG:0:8054 162,2276
    MG:0:8057 1883,2012~2013
    MG:0:8061 1369,2650
    MG:0:8062 1489,1491
    MG:0:8064 2277~2278,2471
    MG:0:8066 1872~1873
    MG:0:8067 1845~1846,1884
    MG:0:8070 166,219
    MG:0:8072 953~954
    MG:0:8074 1286~1287
    MG:0:8075 907~908
    MG:0:8077 880,883
    MG:0:8079 165,167~168
    MG:0:8080 1684,1724
    MG:0:8081 1420~1421,1438
    MG:0:8086 532~533
    MG:0:8087 682~683
    MG:0:8088 2540,2611
    MG:0:8089 516~518
    MG:0:8093 1070~1071
    MG:0:8094 1096,1257
    MG:0:8096 1848~1849
    MG:0:8097 863~864
    MG:0:8101 2281~2282
    MG:0:8102 2434,2458
    MG:0:8103 2578~2579
    MG:0:8104 2104~2105
    MG:0:8106 1106~1107
    MG:0:8109 903,1357
    MG:0:8116 1840~1841,2022
    K:0:8201 2102,2482,2535~2536
    K:0:8202 162~163,172
    NA:0:8301 1068~1069,1072,1087
    NA:0:8302 1119~1122
    NA:0:8303 643~644,904,1354
    NA:0:8305 630~632
    NA:0:8306 2092~2094,2612,2649
    NA:0:8307 40~41,442~443
    NA:0:8308 1394,1432~1433,1724
    NA:0:8310 2577~2579
    NA:0:8311 2523~2525
    NA:0:8314 2541,2607
    NA:0:8315 165~167
    NA:0:8316 896~897
    NA:0:8317 1416~1417
    NA:0:8318 2543~2544
    NA:0:8320 2543~2544,2611,2615
    NA:0:8321 836~837,1736~1737
    NA:0:8323 2112~2113,2475~2476
    NA:0:8324 130,146
    NA:0:8325 776~777,779
    NA:0:8326 1971,2009~2010,2012
    NA:0:8327 821,853~854,1831~1832
    NA:0:8328 56,59~61
    NA:0:8329 66,107~108
    NA:0:8330 140~142
    NA:0:8331 170~171,218~219,221
    NA:0:8332 386~388,402
    NA:0:8333 1894,1897~1898,1939
    NA:0:8334 1894~1897
    NA:0:8335 621~623,628,630
    NA:0:8336 1706~1707
    NA:0:8338 2659~2660
    NA:0:8339 2540,2611,2616,2645
    NA:0:8340 1740~1741,2033
    NA:0:8341 681~683
    NA:0:8342 891~893
    NA:0:8344 2663,2811~2812,2816~2817
    NA:0:8349 914~915,1043~1045
    NA:0:8350 623~624,901
    NA:0:8353 1040~1041,1296
    NA:0:8354 768~769,2112
    NA:0:8355 1119,1243~1244
    NA:0:8356 920,2278~2279,2463,2467
    NA:0:8357 941~942,1024
    NA:0:8359 898,922~924,2109
    NA:0:8360 453~454,478~479
    NA:0:8362 167~168,2110~2111,2277
    NA:0:8363 1359~1360
    NA:0:8364 636,2057~2058
    NA:0:8365 391~392,398~399
    NA:0:8366 544~545,611~612
    NA:0:8367 464,475
    NA:0:8368 798,814~816
    NA:0:8369 391~392,395,398
    NA:0:8370 1832,2022
    NA:0:8371 2491~2492,2529
    NA:0:8372 919,922,924
    NA:0:8373 1576~1577,1618~1619
    NA:0:8374 195~196,415~416
    NA:0:8375 868~869,886~887
    NA:0:8376 633,2535~2536,2538~2539
    NA:0:8377 911,1293,1295
    NA:0:8378 762,902~903
    NA:0:8379 831~832
    NA:0:8381 2585~2587,2592
    NA:0:8382 2772~2773
    NA:0:8385 1077,1079
    NA:H:8309 1133~1134
    NA:T:8343 308,335,342
    CL:0:8513 1300,1329
    CL:0:8517 594~595
    CL:0:8522 1072,1087,1291
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.