# | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
---|---|---|---|---|---|---|---|---|---|
8201 |
5wwf:D (2.15Å) |
10 | N/A | URS0000CBFF5A | N/A | synthetic construct 32630 |
29379020 | Assembly2 protein:C:17~192 1~5 |
|
8202 |
5wwr:C (3.096Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() 1211 ![]() M161_0.6 ![]() s59 |
Assembly1 protein:A:2~466 2~5,11~12,23~26,37~38,70~76 |
8203 |
5wwr:D (3.096Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() 1211 ![]() M161_0.6 ![]() s59 |
Assembly2 protein:B:2~466 2~5,11~12,23~27,37~38,70~76 |
8204 |
5wws:C (3.247Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() 1211 ![]() M161_0.6 ![]() s59 |
Assembly1 protein:A:2 2~5,11~12,23~26,37~38,70~76 |
8205 |
5wws:D (3.247Å) |
71 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() M161_0.6 ![]() 1211 ![]() M147_0.6 ![]() s59 |
Assembly2 protein:B:2 2~5,11~12,23~26,38,70~76 |
8206 |
5wwt:C (3.197Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() 1211 ![]() M161_0.6 ![]() s59 |
Assembly1 protein:A:2~466 2~5,11~12,23~26,37~38,70~76 |
8207 |
5wwt:D (3.197Å) |
71 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC46AB | RF00005 | Homo sapiens 9606 |
28531330 | ![]() M068_0.6 ![]() M161_0.6 ![]() 1211 ![]() M147_0.6 ![]() s59 |
Assembly2 protein:B:2~466 2~4,11~12,23~26,37~38,70~76 |
8208 |
5wyj:3A (8.7Å) |
157 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 protein:3D:8~417 110~111,259~260 protein:3E:3~403 82~86,96,321,324~325 protein:3F:130~570 199,245~248,250~251 protein:3G:5~126 111,113,253~255 protein:3H:5~126 79~82,323,326~327 protein:BE:20~939 62~64 protein:U4:57~182 18~19 protein:UC:1~1033 23,322 rna:5A:7~591 39~54,60,62~72 rna:SA:7~1812 1~14,16~22 |
|
8209 |
5wyj:5A (8.7Å) |
462 | N/A | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 rna:3A:1~333 281~291,294,465~479 protein:3D:8~417 505~506,532~533 protein:AA:1~569 162~163,275,279~280 protein:BE:20~939 289~291 protein:K1:38~212 347~348 protein:MA:29~161 333~335,391~393,395 protein:SR:3~127 239~240 protein:UA:101~1615 495,497~498 protein:UC:1~1033 339,388,404 |
|
8210 |
5wyj:SA (8.7Å) |
1115 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000B21DE0 | RF01960 RF01959 RF00177 |
Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 rna:3A:1~333 9~17,1112~1124 protein:B1:33~1016 439,441,465,518,563,569~573,58 4~585,1595~1596,1599 protein:BA:1~852 1156,1616~1617 protein:BB:11~913 1154,1760,1765 protein:BC:13~810 1647~1648,1803,1805~1807 protein:CA:3~216 1060~1062 protein:CB:81~1237 1058~1059,1683~1686 protein:E1:28~252 1191~1196 protein:E2:28~252 1191,1537,1572,1575~1576 protein:E3:205~465 1215,1217,1219~1222,1232~1233, 1235,1242~1245,1257~1258,1266~ 1267,1269,1434~1435,1438,1448~ 1451 protein:K1:38~212 904,929~930,933 protein:MB:84~267 571,1159,1177,1465,1580,1585~1 588,1603~1606,1623~1624 protein:P1:94~266 1795~1800,1810~1812 protein:SC:20~233 874~875,884~885,931~932,946~94 7,1045,1056,1063~1064,1066 protein:SF:9~245 111,121~123,251~252,297~299,38 1,446~449 protein:SG:20~225 1163~1164,1472~1473,1527~1529, 1610~1613,1615 protein:SH:1~226 127,151~156,159,162~163,178,18 3,265,267~269,272~273,283~284, 287,404~406,417~419 protein:SJ:2~200 105~106,207~210,256~259,301,32 2~324,328~333,336,338~339,341, 384~386,398,400 protein:SK:12~186 23,472,474~475,478~479,511~513 ,536~537,593 protein:SM:2~142 210~212,249,304,307,324~328,33 5~336,338,346~351 protein:SN:20~143 1227~1229,1253~1255 protein:SO:9~142 861~862,868~869,878~880,938~93 9,950,952~953,955~962,964~966, 1073 protein:SP:11~119 895~896,898~901,903,905~906,91 7~918 protein:SR:3~127 1481~1483,1584 protein:SX:2~130 634,637,862~865,1082,1084 protein:SY:43~145 30,562,576,599~601 protein:SZ:2~102 521~523,532 protein:Sc:4~82 870~872,957~959,1048~1050,1071 ~1072 protein:Sd:5~67 1161~1162,1615~1617,1619 protein:Sf:23~52 478~479,499,501,545~546,588,59 0~593 protein:Sg:102~152 1234~1236,1250,1252~1253 protein:U3:13~2432 129,131~132,134,188,200,264 protein:U4:57~182 16~17,1083 protein:U5:8~255 1478,1494,1497~1500,1508~1512, 1516 protein:UC:1~1033 487,493,558,1069,1503 |
|
8211 |
5wyk:3A (4.5Å) |
157 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 protein:3D:8~417 107,110~111,260,262 protein:3E:3~403 82~86,96,321,324~325 protein:3F:130~570 199,202,245~247,250~251 protein:3G:5~126 111,113,253~255 protein:3H:5~126 79~82,323,326~327 protein:BE:20~939 62~64 protein:U4:57~182 18~19 rna:5A:7~591 39~54,60,62~64,66~73 rna:SA:7~1812 1~14,16~22 |
|
8212 |
5wyk:5A (4.5Å) |
462 | N/A | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 rna:3A:1~333 281~292,294,465~468,470~480 protein:3D:8~417 480,505,533 protein:AA:1~569 90,162~163,235,279~280 protein:BE:20~939 289~292 protein:MA:29~161 333~335,391~392,395 protein:SR:3~127 239~240 protein:U5:8~255 252~253 protein:UA:101~1615 495~498 protein:UC:1~1033 270,404,410,446 |
|
8213 |
5wyk:SA (4.5Å) |
1000 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000B21DE0 | RF01960 RF01959 RF00177 |
Saccharomyces cerevisiae S288C 559292 |
28244370 | Assembly1 rna:3A:1~333 9~17,1111~1124 protein:B1:33~1016 51,439,441,465,563,566,569~570 ,572~573,584,1594~1597,1600 protein:BA:1~852 1156,1617~1618 protein:BB:11~913 1642,1644,1760,1764~1765 protein:BC:13~810 1803,1805~1808 protein:CA:3~216 1060~1061 protein:CB:81~1237 1057~1059,1683~1684,1686 protein:E1:28~252 1190~1196 protein:E2:28~252 1191,1197,1537,1572,1575~1576 protein:K1:38~212 904,929~930,933,935 protein:MB:84~267 571,1159,1176,1465~1466,1579~1 580,1585~1587,1603~1606,1623~1 625 protein:P1:94~266 1795~1800,1811~1812 protein:SC:20~233 874~875,885,930~933,946~947,10 45,1056,1063~1067 protein:SF:9~245 111,121~123,205,251~252,297~29 9,381,447~448 protein:SG:20~225 1164,1472~1473,1528~1529,1586~ 1587,1610~1611,1613,1615 protein:SJ:2~200 105,207~211,256~259,301,322~32 3,328~333,336,338~339,384,386, 397~398,400 protein:SK:12~186 23,474~475,478,511~514,537~538 ,592~593 protein:SM:2~142 211~212,249,306~307,324~328,33 5~336,338,346~352 protein:SO:9~142 861~862,868~869,878~879,939,95 0,952,955~956,958~961,963~967, 1072 protein:SP:11~122 886,895~896,898~901,903,905~90 6,916~919,929 protein:SR:3~127 1480,1482~1483,1529,1584,1608~ 1609 protein:SX:2~130 634,637,863~865,1082~1084 protein:SY:43~145 562,576,599~600 protein:SZ:2~102 445,521~525,527,532 protein:Sc:4~82 864,870~872,957~959,1049~1050 protein:Sd:5~67 1161~1162,1615~1617,1619 protein:Sf:23~52 478~479,489~490,502,546,587~58 8,590 protein:U4:57~182 15~16 protein:U5:8~255 1497~1500,1508~1510 protein:UC:1~1033 7,487,493,558,1068~1069,1111,1 113 |
|
8214 |
5wzg:B (2.55Å) |
10 | N/A | URS0000BC4692 | N/A | synthetic construct 32630 |
29036323 | Assembly1 protein:A:88~640 1~10 |
|
8215 |
5wzh:B (2.509Å) |
11 | N/A | URS0000BC46A0 | N/A | synthetic construct 32630 |
29036323 | Assembly1 protein:A:88~640 0~10 |
|
8216 |
5wzi:B (2.75Å) |
11 | N/A | URS0000BC4684 | N/A | synthetic construct 32630 |
29036323 | Assembly1 protein:A:88~640 0~10 |
|
8217 |
5wzj:B (2.101Å) |
11 | N/A | URS0000BC4669 | N/A | synthetic construct 32630 |
29036323 | Assembly1 protein:A:88~640 0~10 |
|
8218 |
5wzk:B (2.8Å) |
11 | N/A | URS0000BC46A0 | N/A | synthetic construct 32630 |
29036323 | Assembly1 protein:A:88~607 1~2,4~10 |
|
8219 |
5x2g:B (2.4Å) |
93 | N/A | URS0000B21DEB | N/A | Campylobacter jejuni 197 |
28306506 | Assembly1 protein:A:1~984 1,4~6,12~25,27~29,41~50,63,65~ 80 dna:C:-7~20 1~21 EDO:B:101 18~19 |
|
8220 |
5x2h:B (2.3Å) |
93 | N/A | URS0000B21DEB | N/A | Campylobacter jejuni 197 |
28306506 | Assembly1 protein:A:1~984 1,3~6,12~23,25,27~29,41~50,63, 65~66,68~80 dna:C:-7~20 1~21 EDO:B:101 18~19 |
|
8221 |
5x6b:P (2.596Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00000B8EA0 | RF00005 | Methanocaldococcus jannaschii DSM 2661 243232 |
29142195 | Assembly1 protein:I:16~396 1,61~62,65,71~75 protein:F:34~210 18~20,45,51,56~58 |
|
8222 |
5x8p:A (3.4Å) |
2809 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000028B73E | RF02540 RF02541 |
Spinacia oleracea 3562 |
28582576 | Assembly1 protein:1:2~47 14~16,528~530,1283~1288,2022,2 029~2031,2033~2035,2060,2068~2 069,2594,2631~2633 protein:2:9~59 2301~2303,2361~2362,2364~2365, 2387,2389,2417,2419,2436 protein:3:91~147 52,56,115,122~125,164~165,470~ 471,476~481,693~695,697~698,76 3,781~782,799,1329~1331,1388~1 389,1398,1636~1637,1648~1649,1 656,1791 protein:4:89~157 226~228,232,235~239,601~603,63 7,641~642,663,677~678,845,965~ 966,2365,2368,2376~2382,2400,2 407~2410,2436~2439 protein:5:1~37 1058~1062,1152,2483~2484,2494~ 2495,2543~2544,2556,2758~2761, 2772~2775 protein:6:94~142 1324,1402,1404~1408,1417,1461~ 1462,1489~1491,1547~1549,1591, 1660~1663 protein:7:48~93 976~977,989,1007,1012~1014,102 7,1030~1031,1055~1056,1175~117 8,2473~2475,2504~2505,2507 protein:C:23~269 701~703,705,740,775,784,790~79 3,795,1445,1530,1532,1536~1537 ,1600~1604,1798~1802,1806~1811 ,1813~1816,1822~1837,1851,1853 ~1855,1915~1917,1985,2087,2089 ,2097,2217,2219~2220,2238,2256 ,2607~2608,2615~2617 protein:D:86~297 755,1158,1690~1694,1706,1709,1 711,2007~2009,2011~2012,2038~2 039,2064,2066~2067,2528~2531,2 588~2589,2591~2592,2596~2597,2 635~2639,2650~2655,2694~2699,2 740~2742,2746~2750,2789~2792,2 803~2804 protein:E:52~261 37~38,329~333,453~455,460,462~ 464,481,596,598,609~611,616~61 7,622~623,626~629,669~671,682~ 686,807~808,812,1223,1225~1226 ,1265~1266,1269,1275~1278,2074 ,2460~2461 protein:F:56~230 2315,2319~2325,2328~2332 protein:G:42~214 1139,2545~2548,2683~2685,2763~ 2767,2769,2775~2776 protein:H:43~95 412,1865~1866,2102~2103,2105~2 107,2109,2212~2213 protein:K:54~246 5~7,539~540,547~550,559,566~56 8,1023,1034~1037,1040,1050,115 9~1160,1164~1170,2053~2054,253 1,2656~2659,2798 protein:L:1~121 1700~1703,1705,1966,2009,2564, 2578~2579,2690~2692,2701,2744~ 2746 protein:M:80~256 181,213,234~236,242~243,427~42 9,577~578,597,607~609,614,634~ 635,638~639,643~644,646,648~64 9,671~676,682~683,816~819,821~ 825,836~837,842~844,970~971,12 11,1213~1214,1223~1224,1263~12 66,1270~1271,1876~1877,1879~18 81,1883,1885,2377,2409~2412,24 21,2424~2426,2431~2433,2445~24 46 protein:N:2~135 872,874~875,880~881,883,915~91 6,919~921,980~986,988,1057,226 7,2293~2295,2484,2486,2500~250 3,2512 protein:O:11~126 1296,1298~1300,1308,1315~1316, 1474~1475,1685~1687,1689~1690, 2015,2023,2707,2718~2719,2725, 2727,2730,2740~2741 protein:P:47~166 2309~2312,2351~2352,2393~2396 protein:Q:115~232 1763~1764,2700~2702,2736~2737 protein:R:3~117 17,28~29,457~459,524,543~547,5 69~571,573~574,588,590~592,594 ,1021~1026,1037~1040,1178~1179 ,1182,1218~1221,1236~1237,1239 ~1240,1247~1248,1269~1270,1272 ~1273,2033,2035 protein:S:88~234 557,559,574~578,582~583,825~82 6,1001~1002,1018,1020~1022,102 4,1187~1190,1208,1243,1245~124 6 protein:T:26~169 23~24,498~500,504,506~507,519, 528~531,758~759,761~762,1283,1 287,1343~1345,1348,1650~1651,2 023~2028 protein:U:102~193 70,112~113,128~129,131,1360~13 63,1419~1420,1633~1637 protein:V:50~173 33,66~67,82~84,87~89,98,103~10 4,306~308,310~311,313,318~319, 336~338,344~346,490,492~496,50 9 protein:X:66~165 856~857,865~867,932,960,1196,2 272~2274,2278~2279,2286~2288,2 292,2296,2347~2349,2353,2369~2 374,2380~2382,2401~2404 protein:Y:72~145 173~174,185,265,384,391~393,40 7~410,412,1384~1387,2093~2095, 2105~2106,2214,2234,2245,2247~ 2249 protein:Z:63~152 49,60,71~72,75~76,94~95,97,109 ~111,132~133,158 protein:m:32~141 897~898 protein:o:21~82 726~727 rna:B:3~119 871~873,924,926~927,986,1055~1 056 rna:W:5~106 2~9,1689~1690,1744~1746,1760~1 762,2020~2021,2061~2062,2639~2 640,2647~2649,2707~2710,2722,2 736~2739,2805~2808 rna:a:3~1488 1739,1847,1857~1858,1926~1930, 1933~1934,1961~1962,1973~1974 |
|
8223 |
5x8p:B (3.4Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000538405 | RF00001 | Spinacia oleracea 3562 |
28582576 | Assembly1 protein:7:48~93 86~87,89 protein:F:56~230 34,42~46,57~58 protein:N:2~135 79,91~93 protein:P:47~166 8~11,28~31,38~39,48~54,115~118 protein:0:38~101 43~44 rna:A:2~2810 79~81,89,91,99,101~103 |
|
8224 |
5x8p:W (3.4Å) |
102 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000000A081 | RF02541 | Spinacia oleracea 3562 |
28582576 | Assembly1 protein:1:2~47 10,88~89,91 protein:D:86~297 6~7,16~19,21,25~27,36~38 protein:K:54~246 101~103 protein:O:11~126 12~13,16~17,42~44,54~55,73~74, 77,84~86 protein:Q:115~232 35,49~53,67,71 rna:A:2~2810 5~7,18~22,49~51,56,62~66,73~75 ,77,97~105 |
|
8225 |
5x8p:a (3.4Å) |
1480 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00003B54E2 | RF00177 RF01959 RF01960 |
Spinacia oleracea 3562 |
28582576 | Assembly1 protein:L:1~121 309~310,1370~1371 protein:Q:115~232 316~317,1380~1382 protein:0:38~101 1259~1261 protein:b:5~231 776~779,798,1022~1025,1047~104 8,1050~1052,1106,1108,1117~111 8 protein:c:3~215 392,1004~1006,1011,1055~1057,1 062,1137~1139,1141,1153~1154 protein:e:138~308 3,5~10,16~17,19~20,507~508,813 ,870~872,1027,1029~1031,1142 protein:f:97~207 621~622,684~686 protein:g:4~152 882,888~889,1188,1237~1239,129 3,1298~1299,1321~1326 protein:h:1~134 4,534~535,537~538,545~548,588, 590~591,601,773~776,823~825,82 7 protein:i:63~195 1066~1068,1078,1094~1096,1125~ 1126,1128,1134~1135,1180~1181, 1196~1198,1238~1239,1290,1292~ 1293,1295~1298,1316~1322 protein:j:98~195 912,921~922,924,1008~1010,1072 ~1075,1098~1100,1150,1202,1227 ~1228,1316 protein:k:21~138 623~625,631~633,636~640,642~64 3,653,655,663~664,666,726~728, 743~745,1455,1471 protein:l:1~123 34~38,334,448~451,466~471,473~ 477,485~487,499~501,504,510,51 6,532~533,828~833,861,1441 protein:m:32~141 896~900,1173~1175,1178~1179,12 15,1242~1244,1250,1254~1257,12 69~1270,1276~1278 protein:o:21~82 529,604~605,615~617,676,687,68 9,698~703,711~712,756 protein:p:1~80 94,96,118,120~121,198~200,280~ 281,296,346~348,361~364,421,42 3~424,555~556,566,571~574 protein:q:58~135 111,114,206~208,224~226,235~23 8,246~249,273,512,533~534,542~ 545,584 protein:r:21~84 611,622,666~668,682~684 protein:s:7~84 904,906~907,963,1168~1169,1173 ~1175,1266,1268~1269 protein:t:76~180 61~62,87~89,91~92,168~171,174~ 177,230~231,233~234,293~296,30 0,302~303,1385,1388,1406~1408 protein:u:95~138 670~671,1473~1475,1477,1479 protein:y:70~177 478~480,641,738,875,913~915,10 03,1178,1287~1288,1332~1333,13 49~1351,1441~1444,1447 protein:d:2~200 9,27~28,372~379,383,396,398~40 1,408~410,437,447,456~457,490~ 494,497,567~569 protein:v:9~198 75,185~186 protein:n:2~100 923~925,928~932,943~944,956,99 7~998,1008~1009,1134~1136,1150 ~1151,1164~1167,1220,1265,1306 ~1307 protein:x:55~91 1183~1184,1193,1212,1215~1217, 1236,1252~1253,1273~1276,1300~ 1301 rna:A:2~2810 650,732,1356~1358,1367,1378,14 32~1433,1442~1445,1466 |
|
8226 |
5x8r:a (3.7Å) |
1480 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00003B54E2 | RF00177 RF01959 RF01960 |
Spinacia oleracea 3562 |
28582576 | Assembly1 protein:b:5~231 776~779,798,1022~1025,1047~104 8,1050~1052,1106,1108,1117~111 8 protein:c:3~215 392,1004~1006,1011,1055~1057,1 062,1137~1139,1141,1153~1154 protein:e:138~308 3,5~10,16~17,19~20,507~508,813 ,870~872,1027,1029~1031,1142 protein:f:97~207 621~622,684~686 protein:g:4~152 882,888~889,1188,1237~1239,129 3,1298~1299,1321~1326 protein:h:1~134 4,534~535,537~538,545~548,588, 590~591,601,773~776,823~825,82 7 protein:i:63~195 1066~1068,1078,1094~1096,1125~ 1126,1128,1134~1135,1180~1181, 1196~1198,1238~1239,1290,1292~ 1293,1295~1298,1316~1322 protein:j:98~195 912,921~922,924,1008~1010,1072 ~1075,1098~1100,1150,1202,1227 ~1228,1316 protein:k:21~138 623~625,631~633,636~640,642~64 3,653,655,663~664,666,726~728, 743~745,1455,1471 protein:l:1~123 34~38,334,448~451,466~471,473~ 477,485~487,499~501,504,510,51 6,532~533,828~833,861,1441 protein:m:32~141 896~900,1173~1175,1178~1179,12 15,1242~1244,1250,1254~1257,12 69~1270,1276~1278 protein:o:21~82 529,604~605,615~617,676,687,68 9,698~703,711~712,756 protein:p:1~80 94,96,118,120~121,198~200,280~ 281,296,346~348,361~364,421,42 3~424,555~556,566,571~574 protein:q:58~135 111,114,206~208,224~226,235~23 8,246~249,273,512,533~534,542~ 545,584 protein:r:21~84 611,622,666~668,682~684 protein:s:7~84 904,906~907,963,1168~1169,1173 ~1175,1266,1268~1269 protein:t:76~180 61~62,87~89,91~92,168~171,174~ 177,230~231,233~234,293~296,30 0,302~303,1385,1388,1406~1408 protein:u:95~138 670~671,1473~1475,1477,1479 protein:y:70~177 478~480,641,738,875,913~915,10 03,1178,1287~1288,1332~1333,13 49~1351,1441~1444,1447 protein:d:2~200 9,27~28,372~379,383,396,398~40 1,408~410,437,447,456~457,490~ 494,497,567~569 protein:v:9~198 75,185~186 protein:n:2~100 923~925,928~932,943~944,956,99 7~998,1008~1009,1134~1136,1150 ~1151,1164~1167,1220,1265,1306 ~1307 protein:x:55~91 1183~1184,1193,1212,1215~1217, 1236,1252~1253,1273~1276,1300~ 1301 |
|
8227 |
5x8t:A (3.3Å) |
2809 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000028B73E | RF02540 RF02541 |
Spinacia oleracea 3562 |
28582576 | Assembly1 protein:1:2~47 14~16,528~530,1283~1288,2022,2 029~2031,2033~2035,2060,2068~2 069,2594,2631~2633 protein:2:9~59 2301~2303,2361~2362,2364~2365, 2387,2389,2417,2419,2436 protein:3:91~147 52,56,115,122~125,164~165,470~ 471,476~481,693~695,697~698,76 3,781~782,799,1329~1331,1388~1 389,1398,1636~1637,1648~1649,1 656,1791 protein:4:89~157 226~228,232,235~239,601~603,63 7,641~642,663,677~678,845,965~ 966,2365,2368,2376~2382,2400,2 407~2410,2436~2439 protein:5:1~37 1058~1062,1152,2483~2484,2494~ 2495,2543~2544,2556,2758~2761, 2772~2775 protein:6:94~142 1324,1402,1404~1408,1417,1461~ 1462,1489~1491,1547~1549,1591, 1660~1663 protein:7:48~93 976~977,989,1007,1012~1014,102 7,1030~1031,1055~1056,1175~117 8,2473~2475,2504~2505,2507 protein:C:23~269 701~703,705,740,775,784,790~79 3,795,1445,1530,1532,1536~1537 ,1600~1604,1798~1802,1806~1811 ,1813~1816,1822~1837,1851,1853 ~1855,1915~1917,1985,2087,2089 ,2097,2217,2219~2220,2238,2256 ,2607~2608,2615~2617 protein:D:86~297 755,1158,1690~1694,1706,1709,1 711,2007~2009,2011~2012,2038~2 039,2064,2066~2067,2528~2531,2 588~2589,2591~2592,2596~2597,2 635~2639,2650~2655,2694~2699,2 740~2742,2746~2750,2789~2792,2 803~2804 protein:E:52~261 37~38,329~333,453~455,460,462~ 464,481,596,598,609~611,616~61 7,622~623,626~629,669~671,682~ 686,807~808,812,1223,1225~1226 ,1265~1266,1269,1275~1278,2074 ,2460~2461 protein:F:56~230 2315,2319~2325,2328~2332 protein:G:42~214 1139,2545~2548,2683~2685,2763~ 2767,2769,2775~2776 protein:H:43~95 412,1865~1866,2102~2103,2105~2 107,2109,2212~2213 protein:K:54~246 5~7,539~540,547~550,559,566~56 8,1023,1034~1037,1040,1050,115 9~1160,1164~1170,2053~2054,253 1,2656~2659,2798 protein:L:1~121 1700~1703,1705,1966,2009,2564, 2578~2579,2690~2692,2701,2744~ 2746 protein:M:80~256 181,213,234~236,242~243,427~42 9,577~578,597,607~609,614,634~ 635,638~639,643~644,646,648~64 9,671~676,682~683,816~819,821~ 825,836~837,842~844,970~971,12 11,1213~1214,1223~1224,1263~12 66,1270~1271,1876~1877,1879~18 81,1883,1885,2377,2409~2412,24 21,2424~2426,2431~2433,2445~24 46 protein:N:2~135 872,874~875,880~881,883,915~91 6,919~921,980~986,988,1057,226 7,2293~2295,2484,2486,2500~250 3,2512 protein:O:11~126 1296,1298~1300,1308,1315~1316, 1474~1475,1685~1687,1689~1690, 2015,2023,2707,2718~2719,2725, 2727,2730,2740~2741 protein:P:47~166 2309~2312,2351~2352,2393~2396 protein:Q:115~232 1763~1764,2700~2702,2736~2737 protein:R:3~117 17,28~29,457~459,524,543~547,5 69~571,573~574,588,590~592,594 ,1021~1026,1037~1040,1178~1179 ,1182,1218~1221,1236~1237,1239 ~1240,1247~1248,1269~1270,1272 ~1273,2033,2035 protein:S:88~234 557,559,574~578,582~583,825~82 6,1001~1002,1018,1020~1022,102 4,1187~1190,1208,1243,1245~124 6 protein:T:26~169 23~24,498~500,504,506~507,519, 528~531,758~759,761~762,1283,1 287,1343~1345,1348,1650~1651,2 023~2028 protein:U:102~193 70,112~113,128~129,131,1360~13 63,1419~1420,1633~1637 protein:V:50~173 33,66~67,82~84,87~89,98,103~10 4,306~308,310~311,313,318~319, 336~338,344~346,490,492~496,50 9 protein:X:66~165 856~857,865~867,932,960,1196,2 272~2274,2278~2279,2286~2288,2 292,2296,2347~2349,2353,2369~2 374,2380~2382,2401~2404 protein:Y:72~145 173~174,185,265,384,391~393,40 7~410,412,1384~1387,2093~2095, 2105~2106,2214,2234,2245,2247~ 2249 protein:Z:63~152 49,60,71~72,75~76,94~95,97,109 ~111,132~133,158 rna:B:3~119 871~873,924,926~927,986,1055~1 056 rna:W:5~106 2~9,1689~1690,1744~1746,1760~1 762,2020~2021,2061~2062,2639~2 640,2647~2649,2707~2710,2722,2 736~2739,2805~2808 |
|
8228 |
5x8t:B (3.3Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000538405 | RF00001 | Spinacia oleracea 3562 |
28582576 | Assembly1 protein:7:48~93 86~87,89 protein:F:56~230 34,42~46,57~58 protein:N:2~135 79,91~93 protein:P:47~166 8~11,28~31,38~39,48~54,115~118 protein:0:38~101 43~44 rna:A:2~2810 79~81,89,91,99,101~103 |
|
8229 |
5x8t:W (3.3Å) |
102 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000000A081 | RF02541 | Spinacia oleracea 3562 |
28582576 | Assembly1 protein:1:2~47 10,88~89,91 protein:D:86~297 6~7,16~19,21,25~27,36~38 protein:K:54~246 101~103 protein:O:11~126 12~13,16~17,42~44,54~55,73~74, 77,84~86 protein:Q:115~232 35,49~53,67,71 rna:A:2~2810 5~7,18~22,49~51,56,62~66,73~75 ,77,97~105 |
|
8230 |
5xbl:B (3.052Å) |
88 | N/A | URS000080E253 | RF02348 | Streptococcus pyogenes 1314 |
28448066 | Assembly1 protein:A:3~1366 12~20,22~28,40~53,58~69,80~81, 83~84,88~92 |
|
8231 |
5xh6:B (2.0Å) |
40 | N/A | URS0000A763A2 | N/A | Acidaminococcus sp. BV3L6 1111120 |
28595896 | Assembly1 protein:A:1~1307 -19~7,10~19 dna:C:-19~10 0~19 EDO:A:1410 -16~-15 EDO:B:104 -9,-5 EDO:B:106 -19,-10 NA:B:101 10~11 NA:B:103 16~17 |
|
8232 |
5xh7:B (2.0Å) |
40 | N/A | URS0000A763A2 | N/A | Acidaminococcus sp. BV3L6 1111120 |
28595896 | Assembly1 protein:A:1~1307 -19~7,10~19 dna:C:-19~10 0~19 NA:B:101 10~11 NA:B:103 16~17 EDO:B:104 -9,-5 EDO:B:106 -19,-10 |
|
8233 |
5xj2:G (2.84Å) |
10 | N/A | URS0000CBFF45 | N/A | Streptococcus pneumoniae TIGR4 170187 |
28949991 | Assembly1 protein:A:1~454 740,742~743,757 |
|
8234 |
5xjc:B (3.6Å) |
84 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000075BAAE | RF00020 | Homo sapiens 9606 |
28502770 | ![]() 1213 ![]() M150_0.6 ![]() 1263 ![]() 1267 ![]() 42 ![]() M158_0.6 ![]() 1355 ![]() M025_0.6 ![]() M075_0.6 ![]() 185 ![]() s67 ![]() 1274 ![]() 1392 ![]() 1390 |
Assembly1 protein:A:25~2335 12~13,19~20,23,25~30,38~39,41, 44~45,47~49,52,55~59,64~65 protein:P:2~229 31~32,52~53 protein:U:1~26 37,46~47 protein:a:3~85 89~90 protein:b:4~89 90~92 protein:c:1~82 91~92,94 protein:d:20~116 87,93~96,100 protein:f:2~75 87~88,93~96 protein:e:14~92 88,95 protein:g:3~76 89~90 rna:F:1~97 42~43 rna:G:-23~150 40~44 |
8235 |
5xjc:F (3.6Å) |
97 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
28502770 | ![]() 1334 ![]() 1124 ![]() s59 ![]() M021_0.6 |
Assembly1 protein:A:25~2335 18,21,37~38,40~43,55~56,64~67, 69~73 protein:J:179~802 60,78~79,83~86 protein:L:6~795 46~49,60,77~81 protein:M:114~243 82,85~89 protein:N:1~143 1~2,19~24,27~28 protein:O:19~303 23~24,26~29 protein:P:2~229 56~58,68,78~79 protein:R:51~316 48,60 protein:W:83~578 21~22 rna:B:8~104 67,69~70 rna:G:-23~150 29~30,32~33,36,38~45,71~73 rna:H:1~184 47,49~56,80,82~83,87~95,97 MG:F:200 72,74 MG:F:201 53~54,74 MG:F:204 55,71 |
8236 |
5xjc:G (3.6Å) |
84 | N/A | N/A | N/A | Human adenovirus 2 10515 |
28502770 | Assembly1 protein:A:25~2335 -11~-9,-7~-3,3,14,16,142~143,1 45 protein:O:19~303 17~22,27 protein:U:1~26 -11~-8 protein:W:83~578 126~129,134 protein:X:51~142 145~146 protein:u:22~411 -23~-18 rna:B:8~104 -5~-3,-1 rna:F:1~97 -2~-1,2~10,13~14,16 rna:H:1~184 132~133,135,138~142,145~147 |
|
8237 |
5xjc:H (3.6Å) |
140 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
28502770 | ![]() 1212 ![]() 1340 ![]() 1110 ![]() 1373 ![]() M068_0.6 ![]() 504 |
Assembly1 protein:A:25~2335 15~16,18~24,26,29~30 protein:M:114~243 2,10~15,17~18 protein:P:2~229 19~20 protein:R:51~316 13,15,18~19 protein:X:51~142 33~36,176~177 protein:h:3~85 100~101 protein:i:4~89 101~103 protein:j:1~82 102~103,105 protein:k:20~116 98,104~107 protein:m:2~75 98~99,104~107 protein:l:14~92 99,106 protein:n:3~76 100~101,168 protein:p:3~96 154~155,158~167,169~171 rna:F:1~97 1,3~12,16~17,19~22,25~28 rna:G:-23~150 31~33,35~39,42,44~46 |
8238 |
5xlo:K (3.8Å) |
38 | N/A | URS0000CBFF51 | N/A | Pseudomonas aeruginosa 287 |
28574055 | Assembly1 protein:A:15~340 27~31 protein:B:15~340 21~26,29,31 protein:C:15~340 15~21,23,25 protein:D:15~340 9~10,12~14,16~19 protein:E:15~340 3~9,11,13 protein:F:15~340 -3~-2,0~3,5~7 |
|
8239 |
5xlp:K (4.2Å) |
24 | N/A | URS0000CBFF1C | N/A | Pseudomonas aeruginosa 287 |
28574055 | Assembly1 protein:C:15~340 15~16,18~19 protein:D:15~340 9~10,12~14,17~19 protein:E:15~340 3~4,6~8,11,13 protein:F:15~340 -3~-2,0,5~7 |
|
8240 |
5xog:P (3.0Å) |
11 | N/A | URS0000BC466F | N/A | synthetic construct 32630 |
28775211 | Assembly1 protein:A:2~1463 1,10 protein:B:9~1222 9~10 dna:T:-21~10 1~10 |
|
8241 |
5xon:P (3.83Å) |
16 | N/A | URS0000BC4683 | N/A | synthetic construct 32630 |
28775211 | Assembly1 protein:A:2~1463 -4~-2,1,10 protein:B:9~1222 -2,0,9~10 dna:T:-21~26 1~10 |
|
8242 |
5xow:G (2.902Å) |
18 | N/A | URS0000BC4696 | N/A | Thermus thermophilus 274 |
28911094 | Assembly1 protein:A:2~685 6~8,12,14~15,18~20 dna:C:1~21 4~19 |
|
8243 |
5xpa:D (2.9Å) |
19 | N/A | URS0000D56C44 | N/A | Thermus thermophilus 274 |
28911094 | Assembly1 protein:A:3~685 9~11,14~15,18~20 dna:C:1~21 3~10,12~19 |
|
8244 |
5xpg:G (2.8Å) |
17 | N/A | URS0000D56C3B | N/A | Thermus thermophilus 274 |
28911094 | Assembly1 protein:A:2~685 5~8,14~15,19 dna:C:1~21 5~19 |
|
8245 |
5xtm:B (2.1Å) |
47 | N/A | URS0000CBFF47 | N/A | Pyrococcus horikoshii OT3 70601 |
29372908 | Assembly1 protein:A:4~124 17~20,29~32 MG:B:103 7,23 MG:B:105 43,45~46 MG:B:109 1~2 |
|
8246 |
5xtm:D (2.1Å) |
47 | N/A | URS0000CBFF47 | N/A | Pyrococcus horikoshii OT3 70601 |
29372908 | Assembly2 protein:C:2~124 17~20,30~32 MG:D:101 10~11 MG:D:102 4~6 MG:D:103 6,35 MG:D:105 2~3,43,45 |
|
8247 |
5xus:B (2.5Å) |
40 | N/A | URS0000BC4668 | N/A | synthetic construct 32630 |
28781234 | Assembly1 protein:A:0~1226 -20~4,6~7,9~14,16~19 dna:C:-19~9 0~19 NA:B:102 10~11 |
|
8248 |
5xut:B (2.4Å) |
40 | N/A | URS0000BC4668 | N/A | synthetic construct 32630 |
28781234 | Assembly1 protein:A:1~1226 -20~-13,-11~7,9~14,16~19 dna:C:-19~9 0~19 NA:B:101 10~11 |
|
8249 |
5xuu:B (2.5Å) |
40 | N/A | URS0000BC4668 | N/A | synthetic construct 32630 |
28781234 | Assembly1 protein:A:1~1226 -20~7,10~14,17~19 dna:C:-19~9 0~19 NA:B:101 10~11 |
|
8250 |
5xuz:B (2.4Å) |
40 | N/A | URS0000BC4668 | N/A | synthetic construct 32630 |
28781234 | Assembly1 protein:A:-2~1226 -20~7,10~14,16~19 dna:C:-19~9 0~19 NA:B:101 10~11 |
|
8251 |
5xuz:F (2.4Å) |
40 | N/A | URS0000BC4668 | N/A | synthetic construct 32630 |
28781234 | Assembly2 protein:E:-2~1226 -20~-13,-11~4,6~7,10~14,16~19 dna:G:-19~9 0~19 NA:F:101 10~11 |
|
8252 |
5xwg:A (3.002Å) |
15 | N/A | URS0000BC468B | N/A | synthetic construct 32630 |
28898762 | Assembly1 rna:A-2:5~19 6~18 |
|
8253 |
5xwp:C (3.086Å) |
58 | N/A | URS0000BC469D | N/A | synthetic construct 32630 |
28757251 | Assembly1 protein:A:0~1153 1~12,14~31,38~42,44~46,48~50,5 3~54 rna:D:1~30 31~58 |
|
8254 |
5xwp:D (3.086Å) |
30 | N/A | URS0000BC467E | N/A | synthetic construct 32630 |
28757251 | Assembly1 protein:A:0~1153 9~15,17~20,22~27,29~30 rna:C:1~58 2~29 |
|
8255 |
5xwp:E (3.086Å) |
58 | N/A | URS0000BC469D | N/A | synthetic construct 32630 |
28757251 | Assembly2 rna:F:1~29 31~58 protein:B:0~1153 1~15,17~31,38~46,48~50,53~54 |
|
8256 |
5xwp:F (3.086Å) |
29 | N/A | URS0000BC467E | N/A | synthetic construct 32630 |
28757251 | Assembly2 rna:E:1~58 2~28 protein:B:0~1153 9~15,17~24,26~27,29 |
|
8257 |
5xwy:B (3.2Å) |
51 | N/A | URS0000BC469D | N/A | synthetic construct 32630 |
28757251 | Assembly1 protein:A:1~1153 1~16,18~35,38~44,53,55~56 |
|
8258 |
5xxb:1 (3.17Å) |
3077 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC46A5 | RF02540 RF02543 |
Toxoplasma gondii 5811 |
28809395 | Assembly1 rna:3:1~122 1085~1087,1090,1141,1143~1145, 1243,1258,1284,1289~1290 rna:4:1~158 4~23,59,185~186,338~345,347~35 0,353~354,357,359,376~377,411~ 426,743~744,778,1491~1492,1516 ~1517,1538,1588,1627,1678~1679 ,1712~1714,1933~1935,2499,2696 ,3105~3106 protein:A:2~247 912~915,950,986,995,1000~1004, 1006,1633,1673,1744~1746,1895~ 1899,2260~2264,2267~2272,2276~ 2278,2285~2294,2296~2300,2314~ 2316,2354~2359,2528,2538,2540, 2634~2635,2637~2639,2662~2663, 2666~2667,2669~2670,2716,2718~ 2719,3072,3078~3080 protein:B:2~384 964,968,1392,1989~1992,2010~20 11,2453,2479,2487,2505~2508,29 89~2994,3026~3027,3049~3052,30 54~3055,3058~3060,3098~3102,31 12~3116,3121~3122,3149~3151,31 56~3161,3198~3199,3201~3202,32 08~3211,3248~3253,3259~3264,33 78~3382,3389~3391,3398~3400,34 11~3414,3449~3450,3452,3459~34 61 protein:C:2~405 204,211~215,223,344~349,351~35 2,354~355,363,365,371~374,481~ 482,508~510,521~522,564~566,57 3~574,576,579~581,625,629,638~ 639,661,685,745~749,751,759~76 2,767,778~784,879~881,892~895, 1019~1020,1023,1303,1433~1437, 1459~1460,1478~1483,1485,1517, 1522~1524,1526,1532~1533,1535~ 1537,2514~2515,2925 protein:D:4~299 1091~1092,1127,1166,1168~1169, 1173,2774,2781,2797~2799,2813~ 2814,2857~2860 protein:E:33~192 559,561,643,3288,3319~3321,335 0~3357,3360 protein:F:8~258 569,577~580,635~637,685~687,82 0~822,1072~1077,1187~1191,1226 ~1227,1242~1243,1245~1246,1254 ~1257,1410~1411,1413~1414,1420 ~1421,1436~1438,1440,1445~1446 ,1460~1461 protein:G:36~272 6~7,119~122,148,150~152,1653,2 550,2626~2627,2636~2639,2641,2 662,2670,2672~2674,2691,2695~2 699 protein:H:2~188 604~605,3005,3009~3012,3132,31 36~3138,3144~3147,3220~3226,32 34~3238,3296,3298~3299 protein:I:2~206 1097~1100,1129,1132~1133,1135~ 1137,1212~1216,1292,1379,2728~ 2729,2745~2746,2755,2757~2759, 2939,2948,2963~2966,2975~2976 protein:J:7~172 2775,2782~2785,2787,2791~2795, 2797~2798,2814 protein:K:2~204 48~49,66,72~77,81,86,97~98,102 ~104,106~108,110,160,170~173,2 50~251,257~258,264,323,334~335 ,337,496,500,754,770,772~774,7 77,786~787,798~801,857~860,886 ~889,1056,1198~1199,2892~2893 protein:L:4~134 585~586,594,607,618,620,1270~1 271,3298,3308,3310~3311,3313,3 315,3317~3319,3346 protein:M:2~205 9,19,28~32,34~36,44~45,49~50,5 5~56,62~63,65,68~69,81~82,99,1 13,115,126~127,150~155,274~277 ,279,284~285,288,290,294,296~3 00,302,312,326~330,752,770,779 ,998~999,1640,1642~1644,2280~2 281,2535~2538,2546,2548,2628~2 629,2709~2712,2719~2720 protein:N:68~268 719~721,1261~1263,1268,1276~12 78,1280,1392~1394,1399~1405,24 95~2497,3099,3119~3120,3215,32 44~3246,3254,3284,3289~3290,32 92~3295,3297,3302~3303,3312 protein:O:2~160 390,396~397,419~421,970,973,15 40,1543~1544,1601~1602,1604,19 49~1950,2463~2470,2501~2502,31 02~3103,3382~3384,3393~3395,34 73~3474 protein:P:2~187 87~89,755~764,796,812~814,834~ 837,868,870~872,874~877,1038~1 039,1064~1065,1196,1247,1420,1 428~1430,1434~1435,1453~1454,1 462~1463,2831,2840~2841,2873~2 875,2900~2901 protein:Q:2~177 923,930~931,944~947,1568~1571, 1694~1697,1756~1758,1765~1766, 1783~1784,1817,1819~1825,1855~ 1856,1881,1963~1964,1967,1976~ 1978,2017~2019,2040~2042,2045, 2050~2052,2206~2207,2214,2217~ 2218,2229,2233,3179~3181 protein:R:2~183 579,582~584,594,596,607,622~62 3,632,1268,1270~1271,1273~1274 ,1298~1301,1380~1383,1403,1407 ~1408,1410~1412,3297~3299,3309 ~3313 protein:S:3~156 1059,1079~1081,1083,1140,1148~ 1152,1173~1174,1182,1185~1186, 2741~2745,2749~2750,2810~2812, 2816,2833~2835,2839,2847~2849, 2861~2862,2867~2868 protein:T:25~124 1769~1774,1776~1777,1780~1782, 1858~1859 protein:U:11~139 1999~2002,2004,2408,2451~2452, 3027~3028,3041~3043,3046,3151~ 3155,3163,3205~3206 protein:V:8~70 2225,3162~3165,3196~3197,3415~ 3416,3446,3448,3450 protein:W:40~166 12,14~17,1619~1622,1653~1654,1 673~1674,1702~1704,1933~1936,2 635~2636 protein:X:2~125 187~189,191,193,202~203,216~22 1,227~232,343~344,383~384,386, 402 protein:Y:2~146 1723~1724,1726~1732,1811~1812, 1909~1911,1915,2667~2668,2673~ 2674,2676 protein:Z:2~147 38~40,70,85,88~90,94~96,101,29 1,312~313,496~497,727~728,748~ 750,792,796,801~802,860,882~88 4,887~889,892,1026~1029,1032~1 033,1054~1057,1200~1201,1467~1 469,1472,1524~1525,1527~1528,2 838,2874~2876,2888,2898~2899,2 910~2911 protein:a:2~51 838~840,864~866,1043~1044,1058 ~1060,1073,1154,1162~1165,1174 ,1205,1222~1226,2729,2753~2754 ,2833,2849,2928 protein:b:11~107 1814,1816,1829~1831,2665 protein:c:12~119 1552~1558,1573,1985~1987,2458~ 2459,3168~3171,3187,3192,3406~ 3409,3454~3455,3457,3465~3469 protein:d:7~128 416,431,433~434,721~722,726~72 7,742,1034~1037,1231~1234,1248 ~1249,1425~1427,1449~1450,1464 ,1485~1486,1488~1491,1499~1505 ,1507~1510,1530 protein:e:6~111 435~439,558~560,643~645,708~70 9,718~720,1235,1252~1254,1264~ 1265,1267,1413~1417,3282~3285, 3287~3289,3323,3359~3363 protein:f:2~108 917,1578,1580,1582~1585,1624~1 625,1682~1688,1691~1692,1700,1 709,1711,1732~1735,1737,1747~1 750,1761~1763,1788~1791,1809,1 839~1841,1843,1884,1886~1887,1 904~1908,1926,1958~1961,2664~2 668 protein:g:3~123 18,20,112,129,172~173,251,253, 263 protein:h:2~99 72~73,159~161,271,273~274,279~ 281,301~307,316~317,322,324,23 29~2332,2334,2336~2337 protein:i:2~90 22~25,52~53,184,355,361,367~37 2,902~909,974~976,993,1010~101 2,1019~1020,1587,1589,1646,194 7~1948,1954~1955,2252~2253 protein:j:2~82 1706~1708,1847~1849,1851~1852, 1927~1928 protein:k:3~51 359,362,365,376,409,1586,1589~ 1592,1612,1614~1615,1682,1936~ 1937,1944~1947,1950 protein:l:77~128 1294~1295,1386,2957~2959,3006~ 3009,3018,3219~3220,3230~3233 protein:n:2~98 44,91~92,284,286,291~292,2534~ 2536,2763~2764,2766~2767,2824~ 2825,2827~2828,2852~2853,2871~ 2872,2877~2880,2896~2897,2902~ 2904,2906~2907,2913 protein:o:2~91 926~928,941~943,948~950,1827,1 830,1893,1895,1897,2028~2030,2 245,2301~2303 protein:p:2~124 460~461,471~474,522~524,531~53 3,541~544,1438,1449,1452,1454, 1482~1483,1520~1522 |
|
8259 |
5xxb:3 (3.17Å) |
118 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000022106C | RF00001 | Toxoplasma gondii 5811 |
28809395 | Assembly1 rna:1:4~3477 77~80,84,88,98~101,103~104 protein:D:4~299 2,5~8,10~11,14~15,25~27,33~34, 44~50,59~62,65~67,110~111,113, 116~117,120 protein:F:8~258 82~85,95~97 protein:I:2~206 63~65,90~92,105 protein:J:7~172 16~17,28~29,39~40,42~44,52,54~ 56 protein:R:2~183 74~75,94~96,98~99 protein:S:3~156 8~9 |
|
8260 |
5xxb:4 (3.17Å) |
157 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001D5B7A | RF00002 | Toxoplasma gondii 5811 |
28809395 | Assembly1 rna:1:4~3477 1~22,24~37,40~41,53~54,93,104, 109~111,113~115,126~127,137~15 8 protein:C:2~405 21,26~28 protein:G:36~272 150~151,153~156 protein:K:2~204 28~31 protein:M:2~205 141~145 protein:O:2~160 3,11~14 protein:W:40~166 113,132~134,136~137,148~152 protein:X:2~125 22~25,70~75,84~85,91 protein:g:3~123 36~38,49~50,60,62,64~66,78,82, 86~87,97 protein:i:2~90 34~35,41~43,57~58,67~68,94~96, 104,110~111 protein:k:3~51 44~46,51~53,75,113 |
|
8261 |
5xxu:2 (3.35Å) |
1619 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000008CA3F | RF01960 RF01959 RF00177 |
Toxoplasma gondii 5811 |
28809395 | Assembly1 protein:A:12~209 1037,1288~1289,1291,1314,1316~ 1318 protein:B:22~233 871~873,880~883,893,927~930,94 3~944,1043,1052,1059~1062,1790 protein:C:34~258 2~7,10~11,13~14,1080~1081,1092 ~1093,1140~1142,1285~1287,1293 ~1297,1421,1622,1633 protein:D:6~216 578,1270~1274,1321~1324,1326~1 328,1416~1417,1423,1433~1434,1 484,1512~1513 protein:E:2~261 92~93,95,118,120~124,246,251~2 53,295~298,381,383,398~399,401 ,447~449,454,460,749~750,752~7 55,760,769~770,782~783,785~787 ,797 protein:F:4~192 1159~1162,1468~1469,1526~1527, 1533,1571,1581,1585,1607~1609, 1611~1613 protein:G:1~221 65~66,68,76~79,91,125~126,136~ 139,146~151,155~159,161~165,26 5,267~269,283~284,394~395,401, 405~407,418,420,1671,1679,1712 ~1713 protein:H:16~193 636~640,693~694,738~740,809,85 3,856~857 protein:I:2~203 101~104,116~117,202~205,256~26 1,301,317~318,322~324,328~333, 336~339,341,347~348,354,385~38 7,391,393,396~400,1674~1676,17 20 protein:J:3~180 1,3,21~25,39~40,369,380,471~47 5,478~479,510,512~513,533~534, 536,554,591~593,756,758~759,76 1~762,764~765,767~769,787 protein:K:7~100 1212,1214~1215,1252,1431 protein:L:6~161 111,113~114,206~207,246~247,24 9,303~307,324~328,335~336,338, 346~349,351,373~374,609~610,62 9,631,742,807,844 protein:N:2~151 625~627,856,858~859,863~867,87 5~877,936,947,949~950,952~953, 955~961,963~964,973,1015~1016, 1032,1067 protein:O:27~156 882~884,891~893,896~903,913~91 5,924~926,986~988,1003~1006,17 76~1780 protein:P:19~134 1175~1178,1206,1236~1237,1448~ 1450,1454~1456,1546~1547,1549~ 1551,1553~1556 protein:Q:9~148 1154,1186~1187,1190,1332,1335, 1346~1347,1362,1374~1376,1406, 1413~1414,1461~1462,1477~1480, 1525~1526,1577~1584,1601~1604, 1606~1608 protein:R:2~118 1306~1307,1310~1311,1327,1382~ 1386,1396~1399,1410~1411 protein:S:11~145 1168~1170,1172,1453~1455,1457~ 1458,1501,1531~1532,1537,1542~ 1546,1556~1557,1562~1565 protein:T:4~154 1352~1355,1360,1362,1364,1463~ 1464,1472~1477,1496~1500,1502, 1518~1519,1521~1524,1539~1540, 1560~1561,1588~1589,1599 protein:U:129~231 1184,1189,1192~1194,1275~1277, 1329~1330,1340,1342,1367,1377~ 1379,1425~1426,1513~1514,1601~ 1602 protein:W:2~130 371~372,632~634,636,683~684,74 4~747,800~803,860~862,1032~103 6,1090~1091,1093~1097 protein:X:2~137 18~19,29~30,311,351,359,434~43 5,564,566~571,573~575,584,598~ 599,608~610,613,631~632,1097~1 099,1101,1103~1104,1127 protein:Y:5~132 54~55,57,84~86,145,155,441,443 ,445,458~459,520~525,530~532,7 64,775~778,780 protein:Z:90~160 1528~1529,1531~1533 protein:a:2~100 927~933,935,939~940,1070,1085~ 1086,1137,1625~1627,1757,1761, 1781~1790 protein:b:2~80 861,867~869,955~956,1045~1047, 1058,1065~1066 protein:c:3~67 1613~1615,1617 protein:d:4~54 1194,1199~1200,1239,1275,1329~ 1330,1414,1416,1429~1430,1446~ 1448,1483,1551~1552,1593~1595 protein:e:2~58 476~479,505,543,555~558,562~56 3,565~567,583~584,586~590 protein:f:102~152 1228,1247~1248 protein:m:2~39 618,1023,1106,1108~1113,1120~1 122,1135~1136,1629,1640,1652~1 653,1754,1763~1766,1769~1770,1 773~1775 |
|
8262 |
5xy3:1 (3.2Å) |
2544 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000029F830 | RF02540 RF02543 |
Trichomonas vaginalis 5722 |
28809395 | Assembly1 rna:3:1~117 722~725,778~782,880,895,920,92 6 rna:4:1~160 2~21,57,132,303~306,308~310,31 2~315,318~319,322,324,341~342, 377~381,383~392,431~432,466,11 08~1109,1112,1132,1154,1243~12 44,1262,1496~1497,1904,2449~24 51,2596 protein:A:2~247 548~551,586,623,632,636~641,64 3,652,1322,1466~1468,1662~1666 ,1669~1671,1673~1674,1677~1680 ,1689~1702,1704,1711,1718~1720 ,1758,1760~1762,1933,1942~1943 ,2060~2062,2414,2416,2421~2423 protein:B:2~406 601,605,1028,1551~1554,1854,18 58~1859,1884~1885,1909~1913,23 34~2339,2370~2372,2393~2396,23 98~2399,2402~2405,2442~2447,24 54~2458,2463~2464,2491~2493,24 98~2503,2537~2538,2540~2541,25 46~2550,2588~2591,2598~2602,26 57~2659,2666~2669,2671~2677,26 79~2681,2688,2690~2692,2730~27 31,2739,2744 protein:C:3~370 187~190,208,309~314,316~317,31 9~320,328~330,336~339,433~437, 439,447~450,455~456,464,466~47 2,516~517,526,528~532,660,937~ 939,1068~1070,1095~1101,1132~1 134,1139~1142,1148~1152,1919~1 920 protein:D:2~308 764~765,802~805,810,2117,2141~ 2142,2156~2157,2200~2204 protein:E:3~151 827~828,1067~1068 protein:F:9~239 709~714,824~827,862~863,880~88 3,891~894,1046,1054~1056,1065~ 1066,1077 protein:G:42~238 5~6,116,121,134~137,1256,2031~ 2032 protein:H:4~197 933~934,2355~2357,2478~2480,24 86,2488~2489,2559~2565,2574~25 76,2578,2627 protein:I:2~203 733~736,767,769~771,773~774,84 9~852,928,2072,2080,2089,2098~ 2102,2284~2285,2291~2292,2294, 2308~2311,2320~2321 protein:J:4~167 2118,2125~2128,2130~2131,2133~ 2138,2140~2141,2157 protein:L:2~186 34,45~47,70~75,84,94~96,100~10 2,104~106,108~109,150,152~154, 230,287,298~301,442,460,462,46 5~466,474~475,522~526,836,2235 protein:M:2~125 907~909,2627 protein:N:2~204 8,17~18,26~31,33~34,42,44,47,5 4~56,60~62,66~67,79~80,97,111~ 112,114,124,133,136~140,240~24 2,244,250,254~255,259~265,267, 270,277,292~295,440,458,466~46 7,635~636,1681,1683,1685,1941~ 1943,1952,2033~2034,2051~2055, 2062~2064 protein:O:4~199 406~407,898~900,905,913,915,10 28~1030,1035~1040,1900~1901,24 43,2460~2463,2554~2556,2584~25 87,2621~2626 protein:P:3~158 355,361~364,384~387,607,610,11 59~1161,1217~1218,1220,1511~15 12,1868~1876,1905~1907,2447~24 48,2659,2661,2670,2672,2752 protein:Q:2~186 85~87,443~453,484,504~508,510~ 513,697,700~703,829~830,833,88 3~884,1055,1069~1070,1079~1080 ,2174,2183~2185,2216,2245~2246 protein:R:2~163 559,567,580~582,1184~1187,1211 ,1277~1280,1334~1335,1343~1344 ,1362,1390,1392~1398,1452,1526 ,1529,1536~1540,1579~1582,1603 ~1607,1612~1614,1617,1619~1620 ,1631,1634~1635,2518~2520,2522 protein:S:2~176 908~910,935~937,1016~1018,1039 ,1043~1044,2626,2628 protein:T:2~159 715~718,720,775~777,786~789,79 1,810,818~820,822~823,2084~208 7,2089,2093~2096,2152~2155,215 9,2176~2178,2180~2181,2189~219 1,2204,2209~2211 protein:U:3~101 1346,1348~1354,1358~1360,1432 protein:V:7~140 1562~1564,1566,1813,1856~1857, 2336,2370,2372~2373,2386~2388, 2470,2494~2497,2504,2506,2544 protein:W:5~63 1627,2504~2507,2534~2536,2693~ 2694,2727,2730 protein:X:38~138 13~15,1233~1237,1281,1285~1287 ,1495~1498 protein:Y:2~135 163~164,166,168,177,187,191~19 5,202~204,207,308~310,346,348~ 349,351 protein:Z:2~139 1304~1310,1384~1385 protein:a:2~150 36~38,69,86~88,92~94,256,277~2 78,415,417,436~437,480,484~485 ,489~491,519~520,523~524,528,6 63,665~666,669~670,691~694,837 ~838,1084~1087,1089,1140~1141, 1143~1144,2183,2217~2218,2232, 2243~2244,2255 protein:b:2~52 502,504,678~682,688,696~697,71 0,798~801,811,813,831,840~841, 859~863,2072,2096,2174~2175,21 92 protein:c:12~109 1387,1389,1402~1404 protein:d:5~108 1169~1174,1188~1189,1547~1549, 1863~1864,2510,2526~2527,2683~ 2686,2735,2737,2745~2746,2748 protein:e:5~127 397~399,410,413~415,420,430,67 1~674,869~870,885~886,1060~106 2,1101~1103,1105,1108,1116~112 1,1124~1127,1133,1135,1146 protein:f:5~102 401~403,405~408,871,888~891,90 1~904,1048~1051 protein:g:2~116 1194,1196,1198,1200~1202,1240, 1266~1267,1269~1271,1273~1275, 1283,1292~1293,1310~1315,1324~ 1328,1340~1341,1366~1368,1382, 1412~1416,1457,1475~1479,1519, 1521~1523,1538 protein:h:2~123 18,126,141,150~153,219,228~229 protein:i:16~88 115~116,237~238,245~246,266~26 8,270~271,273,1733,1735~1737,1 741 protein:j:2~79 21~23,50~51,306,326,332~335,33 7,538~539,541~544,611,628,648, 656~657,1203~1204,1509~1510,15 16~1517,1654~1655 protein:k:2~69 1289~1291,1421~1426,1491 protein:l:2~51 324,329,349,374~376,1205~1208, 1228,1265,1497~1499,1506~1509, 1513 protein:m:80~131 930~931,1022,2303~2304,2351~23 54,2363,2558~2560,2570~2573 protein:o:2~94 42,89~91,250~251,256~258,1743, 1939,1941,2106~2109,2167~2171, 2195~2196,2214~2215,2219~2225, 2241~2242,2248~2249,2251~2253, 2258 protein:p:2~90 562~563,577~579,581,584~586,14 00,1402~1403,1463~1468,1590~15 92,1647,1705~1707 |
|
8263 |
5xy3:3 (3.2Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00000C225A | RF00001 | Trichomonas vaginalis 5722 |
28809395 | Assembly1 rna:1:2~2755 77~80,84,88,98,100~102 protein:D:2~308 1,4~7,9~10,12~14,22,25~26,32~3 5,44,46~49,59~61,63,65~67,107~ 110,115~117 protein:F:9~239 82~83,85,95,97 protein:I:2~203 63,89~90,104 protein:J:4~167 15~17,27~28,38~40,42~44,54~56 protein:S:2~176 74~75,93~96,98~99 protein:T:2~159 7~8,67 |
|
8264 |
5xy3:4 (3.2Å) |
154 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000527ECE | RF00002 | Trichomonas vaginalis 5722 |
28809395 | Assembly1 rna:1:2~2755 1~3,5~14,16~23,25~38,41~42,53~ 54,103,105,108,112~113,141~153 ,155~160 protein:C:3~370 22~23,27~29 protein:G:42~238 152~159 protein:L:2~186 30~32 protein:N:2~204 144~146 protein:P:3~158 4~5,14,16 protein:X:38~138 60~61,98,112,121 protein:Y:2~135 23~25,70,72~75,84~85 protein:h:2~123 36~39,50,61,64~67,79,86~87,96~ 97 protein:j:2~79 33,35~37,42~44,58~59,93~94,103 ,110 protein:l:2~51 47,51~54,75~76,111~112 |
|
8265 |
5xyi:2 (3.35Å) |
1490 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC4699 | RF01960 RF01959 RF00177 |
Trichomonas vaginalis 5722 |
28809395 | Assembly1 protein:A:11~219 860,873,889,1101~1102,1104,113 0~1133 protein:B:19~238 694~695,704~706,716,740,750~75 3,767~768,864~865,874~876 protein:C:47~264 1~5,9~10,12~14,894,906~907,954 ~955,1099,1106~1109,1441 protein:D:5~214 501,1083~1087,1138~1143,1229~1 230,1232~1233,1245~1247,1322~1 323 protein:E:2~248 81~84,101,108~110,112,184~186, 193~195,228~232,312~316,329,33 1,377~381,385,600~601,604~606, 621,633~634,644 protein:F:1~193 971,974~975,1214,1281~1283,133 3~1336,1341~1342,1378~1379,138 9,1392~1394,1415~1419,1421 protein:H:2~165 560~561,563~565,575~580,590,65 5,676~680 protein:I:2~194 94~95,107,177~179,199,201,203, 233,250~253,258~268,271,277,28 4~285,316~317,322~324,327~331, 1481~1484 protein:J:5~166 2~3,20~23,402~406,409~410,435~ 436,455,476,514~516,609~611,61 3,615~616,618~619,634 protein:K:1~91 1025~1028,1041,1065,1074,1244 protein:L:4~155 103~104,188~191,236~240,254~25 8,265~266,268,276~279,281,303~ 304,532~533,552,554,656 protein:M:1~118 1036~1038 protein:N:2~151 548~551,657~658,679~682,684,68 6~689,697~699,759~760,770~773, 775~776,778~783,785~787,839,85 4~855,881~882 protein:O:25~159 705~707,715~716,719~727,737~73 8,747~749,809~811,826~827,1549 ,1565,1567~1569 protein:P:11~131 987~989,991,1019,1049~1051,126 2~1264,1266,1268~1270,1355~135 7,1359~1364 protein:Q:2~140 1000,1003,1147~1148,1160~1161, 1174~1175,1185~1187,1220,1226~ 1227,1274~1276,1292~1293,1386~ 1387,1389~1392,1409~1412,1414~ 1416 protein:R:3~120 1121,1126,1128,1142,1193~1199, 1209~1211,1222~1224 protein:S:9~143 981~982,984~986,1267~1272,1311 ,1341,1346,1352~1355,1370~1373 protein:T:2~147 1167~1169,1172~1176,1277~1278, 1286~1290,1306~1312,1329~1330, 1332,1336,1349~1350,1370,1396~ 1397,1407 protein:U:21~121 1002,1005~1007,1088~1090,1144~ 1145,1154~1155,1157,1188~1190, 1238,1297,1324,1409~1411 protein:W:2~130 534,557~560,595~597,647,649~65 0,681~683,787,854~856,858~859, 904~905,907,909~911 protein:X:3~142 18,26~29,242~243,281,289,365~3 66,487~494,496~498,506,520~522 ,531~534,555,910~914,917,940~9 41,945,1522,1535 protein:Y:5~117 152,376,445~446,448,454~456,61 5,623,625~628 protein:Z:18~90 1337,1340~1342 protein:a:2~102 750,752~756,762~764,850,886,89 9~900,951~952,961~962,1433~143 5,1546,1569~1577 protein:b:2~83 684,690~692,777~779,869~870,87 9~880 protein:c:7~67 970,1422~1423,1425 protein:d:5~56 1006~1008,1012~1014,1025,1088, 1241~1243,1261~1262,1297,1299, 1361,1400~1403 protein:e:8~49 407~408,410,427~428,467,489,50 6~509,515 protein:g:21~332 1149,1151,1193~1194,1200~1201 protein:n:2~25 924~925,927,934~936,1459~1461, 1553~1555,1563~1564 |
|
8266 |
5xym:A (3.08Å) |
2665 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00003A7753 | RF02540 RF02541 |
Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 protein:0:2~56 15~16,607~608,674,1380~1382,13 84,2242~2244,2247~2249,2272~22 73,2281~2284,2839,2841~2842,30 39~3040,3106,3108,3110~3111 protein:1:6~52 740,2511~2513,2572,2574~2575,2 597~2599,2626 protein:2:2~47 53,124~126,212~213,549~550,555 ~560,800~802,804~805,870,888~8 89,906,1427,1485~1486,1496,183 3~1834,1841 protein:3:2~64 244~246,249~250,252~257,686,68 8,726~728,747~748,952,2577,258 6,2588~2590,2610,2618~2621,264 5~2648 protein:4:1~37 1152,1245~1246,2692~2694,2705, 2753~2755,2766,2969~2970,2980~ 2984 protein:C:2~274 808~811,824,846~847,882,891~89 2,897~900,902,1649~1650,1713~1 714,1723~1725,1788~1793,1916,2 008~2012,2017~2020,2023~2026,2 032~2041,2043~2047,2061~2062,2 064~2065,2128~2129,2198~2199,2 204,2299~2301,2311,2430,2448~2 449,2466,2817~2818,2824~2827 protein:D:3~214 862,1251,1875~1878,1891,1894,1 896,2220~2221,2224~2226,2251~2 252,2277~2280,2738~2740,2798~2 799,2801~2802,2805~2807,2845~2 849,2860~2865,2906~2909,2951,2 956~2960,2998~3001,3011~3013,3 034~3035,3045~3047,3054~3055 protein:E:2~209 37~38,405~408,533~535,539~540, 542~543,560~561,683~685,687,69 5~696,702~704,709,711~714,716, 777~778,789~794,919,1320,1322, 1362~1363,1366,1373~1375,2286~ 2287,2671~2672 protein:F:9~184 2525,2529~2532,2534~2535,2537~ 2542 protein:G:13~176 2753,2756~2758,2885~2886,2893~ 2895,2970~2976,2984~2986 protein:H:1~39 2319~2320,2424~2425 protein:J:2~147 6~8,618~619,628,652~654,1116,1 126~1128,1130,1132~1134,1143,1 252~1253,1258~1263,2267,2742,2 866~2867,2869,2995,3007 protein:K:1~122 1885~1888,2178~2179,2222~2223, 2774~2775,2788~2789,2901~2903, 2910~2911,2953,2955 protein:L:3~146 247,252,254~255,661~663,682,69 3~694,717~718,722,724,727~731, 733~734,768~769,780~781,922~92 6,928~931,943~944,949~951,1062 ~1063,1308,1321,1362~1363,1368 ,2586~2587,2619~2621,2632~2633 ,2641~2644,2655~2656 protein:M:1~135 989~990,992,1025~1030,1072,107 4~1079,1150,2478,2502~2505,269 4,2696,2710~2712,2722~2723 protein:N:2~117 1393~1394,1396~1397,1405,1412~ 1413,1677,1679,1870~1874,2228~ 2229,2236,2916~2917,2928~2929, 2933~2935,3041,3062~3064,3074, 3093~3094,3096,3104~3106 protein:O:9~127 2519~2522,2561~2562,2603~2605 protein:P:2~112 1973~1974,2909~2912,2945~2946, 3069~3073,3099 protein:Q:2~125 17~20,29~30,536~538,540,622~62 6,654~656,658~659,675~679,1111 ,1113~1119,1130~1133,1135,1271 ~1276,1278,1315~1316,1333~1334 ,1345,1366,1368~1370,2245~2248 protein:R:3~102 659~660,662,666~667,932~933,10 95,1113~1115,1117,1284~1285,13 05~1306,1340~1342 protein:S:7~117 23~26,577~578,580~581,583~585, 598,607~608,610,865~866,869,13 84,1389,1440~1441,1443,1835~18 36,2236~2241 protein:T:4~96 58~59,64,71,144~145,1430,1454, 1456~1460,1510,1517,1818~1820, 1822 protein:U:1~105 83~86,383~384,386,393~394,412~ 414,420~422,571 protein:V:7~183 993~995,1160~1161 protein:W:8~83 761~762,974~976,1040~1041,2488 ~2490,2497~2499,2504~2506,2556 ~2561,2563,2579~2584,2590~2592 ,2613~2614 protein:X:2~63 167~168,190,202~203,463,470~47 2,478,486~489,491,1482~1483,23 05~2306,2316,2318,2425~2427,24 44~2445,2457~2459,2660 protein:Y:6~66 61,72,76~78,96~97,111~112 protein:Z:2~59 967~969,1045~1047,1088~1089,10 91,1109~1110,1121,1279,1302 protein:a:2~24 1068~1069,1081,1099~1100,1103, 1105~1107,1122~1123,1147,1255, 2255~2256,2258,2683~2684,2716 rna:B:2~117 979~981,1033~1036 MG:A:3204 541,544 MG:A:3210 673~675 MG:A:3213 851,879 MG:A:3215 869,1835 MG:A:3216 901~902,2816 MG:A:3217 902,2815 MG:A:3220 945,2656~2657 MG:A:3223 1068,1082~1083 MG:A:3224 1120,1275 MG:A:3225 1386,2233 MG:A:3226 1387,2232 MG:A:3227 1389~1390,1868~1869 MG:A:3228 1432~1433,1450 MG:A:3230 1476,1489 MG:A:3231 1512,1825 MG:A:3232 1513,1824 MG:A:3234 1891~1892 MG:A:3237 2195,2819 MG:A:3242 2288,2729 MG:A:3246 2495~2496 MG:A:3248 2536~2537 MG:A:3252 2938,2941 MG:A:3255 502,2634 MG:A:3257 936,1305 MG:A:3260 1477~1478 MG:A:3264 671,2728,2730~2731 MG:A:3267 2724~2726 MG:A:3268 665,2675,2726 MG:A:3269 2000,2002~2003 MG:A:3270 848,879 MG:A:3271 858,2003~2004 MG:A:3272 944,2654~2656 MG:A:3274 2800~2802 MG:A:3275 1460,1823 MG:A:3276 803~804 MG:A:3277 1890~1892,2777 MG:A:3281 1383,2842 MG:A:3282 905,908 MG:A:3283 197,199 MG:A:3284 1432~1433,1450 MG:A:3286 600~602 MG:A:3298 621,2263 MG:A:3299 671,2730 MG:A:3301 1367~1368 MG:A:3302 796,894,2298 MG:A:3305 855,1842~1843 MG:A:3310 1069~1070 MG:A:3312 1144,1146~1147 MG:A:3313 1134,1265 MG:A:3321 1512~1513,1515,1823~1824 MG:A:3323 1875,2233 MG:A:3324 1885~1886 MG:A:3337 2803~2804 MG:A:3338 2809~2810 MG:A:3341 2803,2808,2837 MG:A:3343 2909,2948 MG:A:3345 2928,2930 |
|
8267 |
5xym:B (3.08Å) |
116 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047BBB1 | RF00001 | Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 rna:A:6~3115 12,79~81,95,97~98 protein:F:9~184 43~44,46,55~58 protein:O:9~127 7~9,28~31,47~53,60,112 protein:V:7~183 75~78,96,101~102 protein:W:8~83 12~13 protein:Z:2~59 83~84 protein:a:2~24 87~88 |
|
8268 |
5xyu:A (3.45Å) |
1379 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001AF2F7 | RF00177 RF01959 RF01960 |
Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 protein:C:2~203 1035~1041,1086~1089,1091~1093, 1170~1171,1174,1185,1187,1259 protein:D:2~200 12,401~404,406~408,429~430,436 ~439,469,490,523~527,599~600,6 02 protein:E:35~193 10~13,19~23,539~540,846,903~90 5,1050~1051,1053~1054,1058,106 0~1062,1380 protein:F:1~85 716~718 protein:G:2~153 914~915,917,921,1221,1271~1274 ,1280,1328,1333,1355,1357~1360 ,1362~1363 protein:H:2~132 566~567,569~570,578~580,620,62 2~624,633,735,803~808,857~860 protein:I:25~148 949,1097~1099,1110~1111,1128~1 130,1159,1167~1169,1214,1230~1 232,1324~1325,1327~1332,1350~1 356 protein:J:4~101 946,951,955,1039,1041,1095,110 4~1106,1131~1133,1179~1180,123 5,1260~1261,1349~1351 protein:K:24~138 655~657,663~665,668~672,675,68 6~688,696,698,757~758,760,776, 1507 protein:L:2~124 37~41,363,481~483,498~503,507, 509,518~519,531~533,542~544,54 7~548,862~863,893,1475 protein:M:2~113 929~932,934,1206~1209,1284,128 8~1292,1304,1310~1313 protein:N:2~61 956~958,961~965,976~977,1028~1 029,1040,1094,1168~1169,1183~1 184,1197~1198,1200,1298~1299,1 340~1342,1351 protein:O:2~87 560~561,636~637,639,647~648,70 8,710,719~722,730,732~734,788~ 789 protein:P:2~96 47~48,106~108,132~134,228~230, 309~310,325,375~377,390~393,44 9~450,587~588,604~607 protein:Q:5~97 123~124,126~127,136~137,193~19 5,200,225~226,234~235,237,253~ 255,264~265,276~277,280,544,56 6,577,616~617,625 protein:R:27~81 643,645,653~654,699~701,713~71 6 protein:S:4~82 940~941,968,995,997~998,1201~1 204,1206,1208,1295~1296,1300~1 304 protein:T:3~85 100~101,103~104,129,173,175,18 2~184,206,208~209,259~263,322~ 324,332~333,1421~1423,1442~144 3 protein:U:2~26 551~553,795,869,872~873,884~88 5,897~899,1377,1388,1470~1471, 1483~1484,1493~1495,1500,1502~ 1504,1513 MG:A:1607 926~927 MG:A:1616 112~113,289 MG:A:1618 299,538 MG:A:1622 556,739~740 MG:A:1625 762,774 MG:A:1627 1034,1178~1179 MG:A:1628 959,1205 MG:A:1633 1483~1484,1489 MG:A:1634 1484,1489,1492 MG:A:1637 552,554 MG:A:1641 1034,1178 |
|
8269 |
5xz1:A (3.008Å) |
22 | N/A | URS0000D77917 | N/A | synthetic construct 32630 |
N/A | Assembly1 rna:B:25~46 3~16,19~23 GET:A:101 16,18~20 GET:B:301 4~5,7~9 |
|
8270 |
5xz1:B (3.008Å) |
22 | N/A | URS0000D77917 | N/A | synthetic construct 32630 |
N/A | Assembly1 rna:A:2~23 26~39,42~46 GET:A:101 28~29,31 GET:B:301 39,41~43 |
|
8271 |
5xz1:C (3.008Å) |
22 | N/A | URS0000D77917 | N/A | synthetic construct 32630 |
N/A | Assembly2 rna:D:71~92 48~62,65~69 GET:C:101 48,50~55 GET:C:102 62,64~66 |
|
8272 |
5xz1:D (3.008Å) |
22 | N/A | URS0000D77917 | N/A | synthetic construct 32630 |
N/A | Assembly2 rna:C:48~69 72~85,87~92 GET:C:101 85,87~89 GET:C:102 73~75,77~78 |
|
8273 |
5y36:B (5.2Å) |
99 | N/A | URS0000CBFF41 | RF02348 | Mus musculus 10090 |
29123204 | Assembly1 protein:A:1~1368 2~3,8~9,12~22,24~25,28,45~52,5 6,58~65,67,81~83,87~88,90~93 dna:C:1~41 1~21 dna:D:15~55 -2~-1 |
|
8274 |
5y58:X (2.8Å) |
30 | N/A | URS0000CBFF2C | N/A | Saccharomyces cerevisiae 4932 |
29290466 | Assembly1 protein:A:28~584 293,295,299~301,304,306 protein:B:2~621 289~296,300,304~305,307 |
|
8275 |
5y58:Y (2.8Å) |
30 | N/A | URS0000CBFF2C | N/A | Saccharomyces cerevisiae 4932 |
29290466 | Assembly2 protein:C:28~584 293,295,299~301,304,306 protein:D:2~621 289~295,300,304~305,307 |
|
8276 |
5y58:Z (2.8Å) |
30 | N/A | URS0000CBFF2C | N/A | Saccharomyces cerevisiae 4932 |
29290466 | Assembly3 protein:E:28~584 293,295,299~301,304,306 protein:F:2~621 289~296,300,304~305,307 |
|
8277 |
5y6z:B (2.5Å) |
15 | N/A | URS0000CBFF52 | N/A | synthetic construct 32630 |
29164396 | Assembly1 protein:A:1~462 598~607 rna:C:690~701 601~611 |
|
8278 |
5y6z:C (2.5Å) |
12 | N/A | URS000080DF73 | N/A | synthetic construct 32630 |
29164396 | Assembly1 protein:A:1~462 695~701 rna:B:597~611 691~701 PO4:C:801 696~697 |
|
8279 |
5y6z:F (2.5Å) |
18 | N/A | URS0000CBFF52 | N/A | synthetic construct 32630 |
29164396 | Assembly2 protein:E:1~462 598~607 rna:G:690~701 601~612 |
|
8280 |
5y6z:G (2.5Å) |
12 | N/A | URS000080DF73 | N/A | synthetic construct 32630 |
29164396 | Assembly2 protein:E:1~462 695~701 rna:F:582~613 690~701 |
|
8281 |
5y7m:B (3.1Å) |
51 | N/A | URS0000CBFF29 | N/A | Pyrococcus horikoshii OT3 70601 |
29372908 | Assembly1 protein:A:4~128 18~21,30~31 GTP:B:101 2,52 |
|
8282 |
5y7m:D (3.1Å) |
51 | N/A | URS0000CBFF29 | N/A | Pyrococcus horikoshii OT3 70601 |
29372908 | Assembly2 protein:C:4~128 18~21,30~31 GTP:D:101 2,52 |
|
8283 |
5y85:A (2.001Å) |
18 | N/A | URS0000CBFF44 | N/A | metagenome 256318 |
29081514 | Assembly1 rna:B:1~50 1~18 MG:A:101 8~9 |
|
8284 |
5y85:B (2.001Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly1 rna:A:1~18 1~6,13,15~16,18,38~43,45~50 MG:B:101 42~43 MG:B:102 43~44 MG:B:105 7,38 |
|
8285 |
5y85:C (2.001Å) |
18 | N/A | URS0000CBFF44 | N/A | metagenome 256318 |
29081514 | Assembly2 rna:D:1~50 1~18 |
|
8286 |
5y85:D (2.001Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly2 rna:C:1~18 1~6,13,15~16,38~43,45~50 MG:D:103 7,38 MG:D:108 43~44 MG:D:109 42~43 |
|
8287 |
5y87:A (2.132Å) |
18 | N/A | URS0000CBFF44 | N/A | metagenome 256318 |
29081514 | Assembly1 rna:B:1~50 1~18 |
|
8288 |
5y87:B (2.132Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly1 rna:A:1~18 1~6,13,15~16,18,38~43,45~50 MN:B:102 42~43 MN:B:103 43~44 MN:B:105 14,45 MN:B:107 7,38 |
|
8289 |
5y87:C (2.132Å) |
18 | N/A | URS0000CBFF44 | N/A | metagenome 256318 |
29081514 | Assembly2 rna:D:1~50 1~18 |
|
8290 |
5y87:D (2.132Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly2 rna:C:1~18 1~6,13,15~16,18,38~43,45~50 MN:D:102 7,38 MN:D:105 42~43 MN:D:106 43~44 |
|
8291 |
5y88:B (3.46Å) |
117 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 32~36,40~41,76~77,79~84,86,94~ 97,100~105,111,113,121 protein:C:67~1008 43~45,75 protein:L:1~157 123~124 protein:P:5~175 88,107~109 protein:Q:30~247 110~111 protein:a:4~102 171~172,174 protein:b:10~92 168,175 protein:c:12~83 167~168,174~175 protein:d:2~76 169~170 protein:f:1~109 165,171~172,174,176~177 protein:g:15~108 165~167,173~174,176,179~180 rna:D:1~101 98~99 |
|
8292 |
5y88:D (3.46Å) |
101 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00006184A9 | RF00026 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 31,35~36,43~44,61~63,69~73,75~ 76,78 protein:I:36~641 64~67,84~92 protein:J:9~587 51~55,66~67,85~86 protein:K:92~211 89,91~93 protein:L:1~157 1,25~30,35~36 protein:M:3~288 28~32,66 protein:N:1~261 34~42,44 protein:P:5~175 62~66,74,84 protein:Q:30~247 32,66,68 protein:S:51~73 1,21,23 rna:B:28~183 72~73,75 rna:E:1~504 45~51,79 rna:F:1~1120 53,55~62,88,93~101 MG:D:200 78,80 MG:D:204 61,77 |
|
8293 |
5y88:E (3.46Å) |
28 | N/A | N/A | N/A | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 rna:D:1~101 2~8 rna:F:1~1120 492~495,497~500,502~504 protein:N:1~261 11~15 |
|
8294 |
5y88:F (3.46Å) |
82 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 19~25,27,31 protein:J:9~587 25,29 protein:K:92~211 4~5,9,13,15~19 protein:P:5~175 20~21 protein:p:29~111 1101,1104~1110,1113~1114 protein:h:6~102 116~117,119 protein:i:10~92 113,120 protein:j:12~83 112~113,119~120 protein:k:2~76 114~115 protein:l:4~85 115,1111 protein:m:1~109 110,116~117,119,121~122 protein:n:44~108 111~112,118~119,121 rna:D:1~101 4~13,17,21~23,26~29 rna:E:1~504 32~35,37~43 |
|
8295 |
5ydt:5A (4.5Å) |
13 | N/A | URS0000CBFF56 | N/A | Saccharomyces cerevisiae S288C 559292 |
28951391 | ||
8296 |
5ydt:SA (4.5Å) |
52 | N/A | URS0000CBFF5E | N/A | Saccharomyces cerevisiae 4932 |
28951391 | Assembly1 protein:U5:11~256 1478,1497~1500,1509~1513,1515~ 1516 |
|
8297 |
5ylz:B (3.6Å) |
117 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 32~36,40,76~77,80~86,95,100~10 1,103~105,111~113 protein:C:67~975 43~44,70,75~76 protein:L:1~157 123~124 protein:P:4~175 88,108~109 protein:R:2~28 92~93,102~103 protein:a:4~102 171~172,174 protein:b:10~92 168,175 protein:c:12~83 167~168,174~175 protein:d:2~76 169~170 protein:f:1~109 165,171~172,174,176~177 protein:g:15~108 165~167,173~174,176,179~180 rna:D:1~103 98~99 rna:E:-13~355 96~100 |
|
8298 |
5ylz:D (3.6Å) |
103 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00006184A9 | RF00026 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 33,36,43,61~63,69~73,75~76,78 protein:I:36~622 65,67,84,86,88,90~92 protein:J:9~587 52~55,66~67 protein:K:98~211 89,92~93 protein:L:1~157 1,25~26,28~30,35~36 protein:T:51~454 1,21~22,48 protein:M:3~296 28~32,66 protein:N:1~261 34~41,44 protein:P:4~175 52,63,65~66,74,84~85 protein:Q:30~247 32,66~67 rna:B:28~183 72~73,75~76 rna:E:-13~355 45~51,58~60,77,79 rna:F:1~1120 53,55~62,88,92~103 MG:D:200 78,80 MG:D:201 59~60,80 MG:D:204 61,77 |
|
8299 |
5ylz:E (3.6Å) |
62 | N/A | N/A | N/A | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 -11,-9,-7~-2,4,299~300,302,304 ,345,347~349,352~354 protein:J:9~587 7,296 protein:T:51~454 286,289 protein:N:1~261 11~15 protein:R:2~28 -10~-8 rna:B:28~183 -5~-1,351~352 rna:D:1~103 -1,2~8,350~351 rna:F:1~1120 287~300,302~304 |
|
8300 |
5ylz:F (3.6Å) |
91 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 19~25,27,30~32 protein:K:98~211 5,7,9,13,15~19 protein:P:4~175 20~21 protein:h:6~102 116~117,119 protein:i:10~92 113,120 protein:j:12~83 112~113,119~120 protein:k:2~76 114~115 protein:l:4~84 115,1111 protein:m:1~109 110,116~117,119,121~122 protein:n:44~108 111~112,118~119,121 protein:p:29~111 1101,1104~1110,1113~1114 rna:D:1~103 1~13,17,21~23,26~30 rna:E:-13~355 32~47 |

Download all results in tab-seperated text for
19236 RNAs.
Click the entry in the '#' column to view structure details of that RNA chain.
Hover over PDB to view the title of the structure.
Hover over Rfam to view names of Rfam families.
Hover over PubMed to view title of the PubMed publications.
Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
<<
<
73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93
>
>>
<<
<
73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93
>
>>
Reference: