SEQ2FUN

FURNA
Download all results in tab-seperated text for 22390 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    8301 5y6z:B
    (2.5Å)
    		 15 N/A URS0000CBFF52 N/A synthetic
    construct
    32630    		 29164396 Assembly1
    protein:A:1~462 598~607
    rna:C:690~701 601~611
    8302 5y6z:C
    (2.5Å)
    		 12 N/A URS000080DF73 N/A synthetic
    construct
    32630    		 29164396 Assembly1
    protein:A:1~462 695~701
    rna:B:597~611 691~701
    PO4:C:801 696~697
    8303 5y6z:F
    (2.5Å)
    		 18 N/A URS0000CBFF52 N/A synthetic
    construct
    32630    		 29164396 Assembly2
    protein:E:1~462 598~607
    rna:G:690~701 601~612
    8304 5y6z:G
    (2.5Å)
    		 12 N/A URS000080DF73 N/A synthetic
    construct
    32630    		 29164396 Assembly2
    protein:E:1~462 695~701
    rna:F:582~613 690~701
    8305 5y7m:B
    (3.1Å)
    		 51 N/A URS0000CBFF29 N/A Pyrococcus
    horikoshii
    OT3
    70601    		 29372908 Assembly1
    protein:A:4~128 18~21,30~31
    GTP:B:101 2,52
    8306 5y7m:D
    (3.1Å)
    		 51 N/A URS0000CBFF29 N/A Pyrococcus
    horikoshii
    OT3
    70601    		 29372908 Assembly2
    protein:C:4~128 18~21,30~31
    GTP:D:101 2,52
    8307 5y85:A
    (2.001Å)
    		 18 N/A URS0000CBFF44 N/A metagenome
    256318    		 29081514 Assembly1
    rna:B:1~50 1~18
    MG:A:101 8~9
    8308 5y85:B
    (2.001Å)
    		 50 GO:0003824 (F) catalytic activity URS0000CBFF28 RF02681 metagenome
    256318    		 29081514 Assembly1
    rna:A:1~18 1~6,13,15~16,18,38~43,45~50
    MG:B:101 42~43
    MG:B:102 43~44
    MG:B:105 7,38
    8309 5y85:C
    (2.001Å)
    		 18 N/A URS0000CBFF44 N/A metagenome
    256318    		 29081514 Assembly2
    rna:D:1~50 1~18
    8310 5y85:D
    (2.001Å)
    		 50 GO:0003824 (F) catalytic activity URS0000CBFF28 RF02681 metagenome
    256318    		 29081514 Assembly2
    rna:C:1~18 1~6,13,15~16,38~43,45~50
    MG:D:103 7,38
    MG:D:108 43~44
    MG:D:109 42~43
    8311 5y87:A
    (2.132Å)
    		 18 N/A URS0000CBFF44 N/A metagenome
    256318    		 29081514 Assembly1
    rna:B:1~50 1~18
    8312 5y87:B
    (2.132Å)
    		 50 GO:0003824 (F) catalytic activity URS0000CBFF28 RF02681 metagenome
    256318    		 29081514 Assembly1
    rna:A:1~18 1~6,13,15~16,18,38~43,45~50
    MN:B:102 42~43
    MN:B:103 43~44
    MN:B:105 14,45
    MN:B:107 7,38
    8313 5y87:C
    (2.132Å)
    		 18 N/A URS0000CBFF44 N/A metagenome
    256318    		 29081514 Assembly2
    rna:D:1~50 1~18
    8314 5y87:D
    (2.132Å)
    		 50 GO:0003824 (F) catalytic activity URS0000CBFF28 RF02681 metagenome
    256318    		 29081514 Assembly2
    rna:C:1~18 1~6,13,15~16,18,38~43,45~50
    MN:D:102 7,38
    MN:D:105 42~43
    MN:D:106 43~44
    8315 5y88:B
    (3.46Å)
    		 117 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 28919079 Assembly1
    protein:A:127~2085 32~36,40~41,76~77,79~84,86,94~
    97,100~105,111,113,121
    protein:C:67~1008 43~45,75
    protein:L:1~157 123~124
    protein:P:5~175 88,107~109
    protein:Q:30~247 110~111
    protein:a:4~102 171~172,174
    protein:b:10~92 168,175
    protein:c:12~83 167~168,174~175
    protein:d:2~76 169~170
    protein:f:1~109 165,171~172,174,176~177
    protein:g:15~108 165~167,173~174,176,179~180
    rna:D:1~101 98~99
    8316 5y88:D
    (3.46Å)
    		 101 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 28919079 Assembly1
    protein:A:127~2085 31,35~36,43~44,61~63,69~73,75~
    76,78
    protein:I:36~641 64~67,84~92
    protein:J:9~587 51~55,66~67,85~86
    protein:K:92~211 89,91~93
    protein:L:1~157 1,25~30,35~36
    protein:M:3~288 28~32,66
    protein:N:1~261 34~42,44
    protein:P:5~175 62~66,74,84
    protein:Q:30~247 32,66,68
    protein:S:51~73 1,21,23
    rna:B:28~183 72~73,75
    rna:E:1~504 45~51,79
    rna:F:1~1120 53,55~62,88,93~101
    MG:D:200 78,80
    MG:D:204 61,77
    8317 5y88:E
    (3.46Å)
    		 28 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 28919079 Assembly1
    rna:D:1~101 2~8
    rna:F:1~1120 492~495,497~500,502~504
    protein:N:1~261 11~15
    8318 5y88:F
    (3.46Å)
    		 82 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 28919079 Assembly1
    protein:A:127~2085 19~25,27,31
    protein:J:9~587 25,29
    protein:K:92~211 4~5,9,13,15~19
    protein:P:5~175 20~21
    protein:p:29~111 1101,1104~1110,1113~1114
    protein:h:6~102 116~117,119
    protein:i:10~92 113,120
    protein:j:12~83 112~113,119~120
    protein:k:2~76 114~115
    protein:l:4~85 115,1111
    protein:m:1~109 110,116~117,119,121~122
    protein:n:44~108 111~112,118~119,121
    rna:D:1~101 4~13,17,21~23,26~29
    rna:E:1~504 32~35,37~43
    8319 5ydt:5A
    (4.5Å)
    		 13 N/A URS0000CBFF56 N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 28951391
    8320 5ydt:SA
    (4.5Å)
    		 52 N/A URS0000CBFF5E N/A Saccharomyces
    cerevisiae
    4932    		 28951391 Assembly1
    protein:U5:11~256 1478,1497~1500,1509~1513,1515~
    1516
    8321 5ylz:B
    (3.6Å)
    		 117 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 29153833 Assembly1
    protein:A:127~2085 32~36,40,76~77,80~86,95,100~10
    1,103~105,111~113
    protein:C:67~975 43~44,70,75~76
    protein:L:1~157 123~124
    protein:P:4~175 88,108~109
    protein:R:2~28 92~93,102~103
    protein:a:4~102 171~172,174
    protein:b:10~92 168,175
    protein:c:12~83 167~168,174~175
    protein:d:2~76 169~170
    protein:f:1~109 165,171~172,174,176~177
    protein:g:15~108 165~167,173~174,176,179~180
    rna:D:1~103 98~99
    rna:E:-13~355 96~100
    8322 5ylz:D
    (3.6Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 29153833 Assembly1
    protein:A:127~2085 33,36,43,61~63,69~73,75~76,78
    protein:I:36~622 65,67,84,86,88,90~92
    protein:J:9~587 52~55,66~67
    protein:K:98~211 89,92~93
    protein:L:1~157 1,25~26,28~30,35~36
    protein:T:51~454 1,21~22,48
    protein:M:3~296 28~32,66
    protein:N:1~261 34~41,44
    protein:P:4~175 52,63,65~66,74,84~85
    protein:Q:30~247 32,66~67
    rna:B:28~183 72~73,75~76
    rna:E:-13~355 45~51,58~60,77,79
    rna:F:1~1120 53,55~62,88,92~103
    MG:D:200 78,80
    MG:D:201 59~60,80
    MG:D:204 61,77
    8323 5ylz:E
    (3.6Å)
    		 62 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 29153833 Assembly1
    protein:A:127~2085 -11,-9,-7~-2,4,299~300,302,304
    ,345,347~349,352~354
    protein:J:9~587 7,296
    protein:T:51~454 286,289
    protein:N:1~261 11~15
    protein:R:2~28 -10~-8
    rna:B:28~183 -5~-1,351~352
    rna:D:1~103 -1,2~8,350~351
    rna:F:1~1120 287~300,302~304
    8324 5ylz:F
    (3.6Å)
    		 91 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 29153833 Assembly1
    protein:A:127~2085 19~25,27,30~32
    protein:K:98~211 5,7,9,13,15~19
    protein:P:4~175 20~21
    protein:h:6~102 116~117,119
    protein:i:10~92 113,120
    protein:j:12~83 112~113,119~120
    protein:k:2~76 114~115
    protein:l:4~84 115,1111
    protein:m:1~109 110,116~117,119,121~122
    protein:n:44~108 111~112,118~119,121
    protein:p:29~111 1101,1104~1110,1113~1114
    rna:D:1~103 1~13,17,21~23,26~30
    rna:E:-13~355 32~47
    8325 5yyn:B
    (3.0Å)
    		 63 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000316653 RF00005 Geobacillus
    stearothermophilus
    1422    		 N/A Assembly1
    protein:A:1~577 902~906,908,913~917,919~921,92
    5,956~957,972
    8326 5yyn:D
    (3.0Å)
    		 64 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000316653 RF00005 Geobacillus
    stearothermophilus
    1422    		 N/A Assembly2
    protein:C:1~577 903~905,913~917,919~920,925,95
    6~957,972~973
    8327 5yzg:B
    (4.1Å)
    		 84 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 29301961
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    protein:A:25~2335 12~13,15,19~20,23,25~30,35,38~
    41,44~45,47~49,55~59
    protein:P:25~229 31~32,52~53
    protein:U:1~26 36~37,46~47
    protein:a:3~79 89~90
    protein:b:7~89 90~92
    protein:c:1~81 91~92,94
    protein:d:20~116 87,93~96
    protein:f:2~75 87~88,93~96
    protein:e:14~92 88,95
    protein:g:3~76 89~90
    rna:F:1~97 42~43
    rna:G:-23~154 41~44
    8328 5yzg:F
    (4.1Å)
    		 97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00001EC8D7 RF00026 Homo
    sapiens
    9606    		 29301961
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    protein:A:25~2335 18,21,37,55~56,63~67,69~73,82
    protein:J:179~802 60,78~79,83~86
    protein:L:6~795 35,45,48~50,60,79~80
    protein:M:114~204 86~88
    protein:N:1~143 1~2,19~24,27~28
    protein:O:19~303 23~24,26~30
    protein:W:83~578 21~22
    protein:Y:2~205 43,45,49,51~52
    rna:B:8~104 67,69~70
    rna:G:-23~154 29~30,32~34,36,38~41,43~45,53~
    54,71,73
    rna:H:1~184 47,49~56,80,82~83,87~97
    MG:F:200 72,74
    MG:F:201 53~54,74
    MG:F:204 55,71
    8329 5yzg:G
    (4.1Å)
    		 88 N/A N/A N/A Homo
    sapiens
    9606    		 29301961
    175

    996    		 Assembly1
    protein:A:25~2335 -11~-9,-7~-4,2~3,5,16,135~136,
    138,146~149,151~152,154
    protein:y:2~192 2,141~142
    protein:O:19~303 17~22,25~29
    protein:U:1~26 -11~-8
    protein:X:2~72 141~143,145
    protein:Y:2~205 -2~-1,2,141~142
    protein:u:22~411 -23~-18
    rna:B:8~104 -5~-3,-1
    rna:F:1~97 -2,1,3~10,12~14,16,144
    rna:H:1~184 2,130,132~135,138~143,145~147
    8330 5yzg:H
    (4.1Å)
    		 139 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 29301961
    1212

    1340

    1110

    1373

    M068_0.6

    504    		 Assembly1
    protein:A:25~2335 15~16,18,21~24,26,29~31,33~36,
    38,45
    protein:y:2~192 39~40
    protein:M:114~204 10~13
    protein:X:2~72 31~33
    protein:Y:2~205 36,38,40~41
    protein:s:68~504 79~81
    protein:h:4~85 100~101
    protein:i:4~89 101~103
    protein:j:1~82 102~103,105
    protein:k:20~116 98,104~107
    protein:m:2~75 98~99,104~107
    protein:l:14~92 99,106
    protein:n:4~76 100~101,168
    protein:p:3~96 154~155,158~167,169~171
    rna:F:1~97 1~12,16~17,19~22,25~28
    rna:G:-23~154 31~33,35~39,41~46
    8331 5z1h:A
    (2.4Å)
    		 19 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 29766661 Assembly1
    rna:B:24~46 3~16,19~23
    FSJ:A:301 4~6,8
    8332 5z1h:B
    (2.4Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 29766661 Assembly1
    rna:A:3~23 26~39,42~46
    FSJ:A:301 39,41~43
    8333 5z1i:A
    (1.903Å)
    		 21 N/A URS0000D56C51 N/A synthetic
    construct
    32630    		 29766661 Assembly1
    rna:A-2:3~23 3~16,19~23
    FSJ:A:301 4~8
    FSJ:A-2:301 16,19~20
    8334 5z3g:A
    (3.65Å)
    		 1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 29557065
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:B:1~156 1,3~23,59,330~337,339~342,345~
    346,349,351,368~369,404~409,41
    1~420,656~657,691,1394~1395,13
    99,1419,1441
    rna:C:1~232 1,3
    protein:F:12~387 3001~3003,3005,3009~3011,3036~
    3039,3044~3047,3049,3086~3087,
    3089~3090,3096~3098,3100,3137~
    3140,3146~3151,3241~3244,3294~
    3297,3304~3307,3313~3316,3320,
    3328~3330,3370,3375,3378~3380,
    3389
    protein:G:2~362 208~212,336~341,344,346~347,35
    5~356,364~365,505,514~516,519,
    578~579,590,596,599,608~610,65
    8,660,662,664,674,680~681,689,
    691~696,789~790,800,803~805,92
    9,933,1346~1349,1361,1380~1386
    ,1388~1389,1419~1420,1424~1427
    ,1429,1436~1439
    protein:I:8~176 444~445,500~503,591,593,595,60
    7~608,611~612,3176~3177,3215~3
    216,3219,3265,3267~3273,3276~3
    277
    protein:J:6~244 507~508,517,519~520,576~578,59
    5~598,983~987,1100~1102,1158~1
    159,1167~1171,1333~1335,1361~1
    362
    protein:K:69~235 7,117,119~121,123,140,144~148
    protein:L:1~191 1210~1212,3020,3024~3026,3034~
    3036,3108,3110~3113,3122~3123,
    3126,3184~3187,3198
    protein:M:1~460 5~7,142
    protein:N:1~226 3018~3019,3022
    protein:O:88~295 196~198,438,441,620~621,3163
    protein:P:21~128 66,72~77,102~103,106~108,110~1
    11,156,683,685~687,691,699
    protein:Q:2~138 524~525,534,559~561,1185~1186,
    3198~3200,3206~3208,3210~3215,
    3229,3260~3261
    protein:R:2~204 18~20,28~29,49,55~58,63~65,69,
    77,79,81~82,98,113~114,126~127
    ,147~149,267~269,281~282,287~2
    91,294,297,320~321,665,682~683
    protein:S:3~199 632,1174~1176,1181,1189~1190,1
    311~1316,1318,2365~2366,2382,3
    005,3007~3008,3134~3135,3172~3
    173,3178~3183,3185,3190~3192,3
    243~3244
    protein:T:10~160 382,388~389,402,412~414,1446~1
    448,2352~2353,2356,3164~3165,3
    297~3298,3308~3309,3392
    protein:U:15~148 671~674,676~677,720,727~730,74
    2~745,784~786,974~976,1347~134
    8
    protein:V:6~421 192~194,452~453,472~474
    protein:W:2~171 519,521~523,534~535,562,1182~1
    183,1186~1187,1211~1214,1295,1
    316,1321~1322,1324,3185~3186,3
    205~3208
    protein:X:3~243 464~467,730~731
    protein:Y:41~484 155,161,260,264
    protein:Z:2~170 196~197,398,439~442,464,468~47
    0,482~483,485,1350~1355,1384,1
    392,1414~1415
    protein:a:26~255 272~273,283~285,303~304
    protein:c:2~126 184~186,188~190,200,212~218,22
    4~226,228~230,335~336,375,378
    protein:d:90~286 252,350,384~385,401~402,687
    protein:i:5~128 423~424,427,439,634,639,655,94
    4~945,947,1144~1147,1161,1338~
    1340,1366,1388~1389,1392~1394,
    1402~1405,1407~1408,1410~1413,
    1433
    protein:j:2~107 429~433,509,583~586,631~633,11
    49,1151,1166~1167,1177~1178,11
    80,1326~1330,3173~3176,3216,32
    19,3274,3276
    protein:l:3~119 17~20,128,135~136,151~153,239,
    255
    protein:m:32~98 265,293~294,297~298
    protein:n:14~85 23~24,52~53,55,347,353,359~364
    ,812~815,929~930
    8335 5z3g:B
    (3.65Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 29557065
    441    		 Assembly1
    rna:A:1~3395 3~12,14~22,24~33,35~37,40,52~5
    3,104,136,138~150,152~156
    protein:K:69~235 154~155
    protein:M:1~460 115~116,120,127~131
    protein:P:21~128 28~31
    protein:R:2~204 141~143
    protein:T:10~160 3~4,12~13
    protein:c:2~126 22~25,70~74,83~85,91
    protein:l:3~119 36~38,49,60~61,63~65,86~87,97
    protein:n:14~85 34~36,40~43,56~57,67,94~95,104
    ,111
    8336 5z3g:C
    (3.65Å)
    		 65 N/A URS000013305B N/A Saccharomyces
    cerevisiae
    4932    		 29557065 Assembly1
    rna:A:1~3395 231~232
    protein:D:55~322 1~2,4~6,8~9,21~22,227~231
    protein:E:88~220 1~2,25~27,36,38,54~59
    protein:H:31~305 4~7,16~19,21~26,32~33,35~37,44
    ~49,52~53
    8337 5z56:B
    (5.1Å)
    		 84 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 29360106
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    protein:A:25~2335 12,20,23,26~29,38~39,44~46,48~
    49,55~58
    protein:d:20~116 87,93~94
    protein:f:2~75 87~88
    protein:e:14~92 88,95
    protein:P:25~229 31~32,51~53
    protein:U:1~26 36~37,47
    rna:F:1~97 42~44
    rna:G:-12~163 40~44
    8338 5z56:F
    (5.1Å)
    		 93 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00001EC8D7 RF00026 Homo
    sapiens
    9606    		 29360106
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    protein:A:25~2335 18,21,55~57,64~73
    protein:2:461~689 42~45
    protein:J:216~802 60,93~95
    protein:L:6~795 48~49,60
    protein:N:1~143 1~2,19~24,27~28
    protein:O:19~303 23~24,26~30
    rna:B:8~104 66~67,69~70
    rna:G:-12~163 30,32~41,43~45,73
    rna:H:1~184 47~56,87~95,97
    MG:F:200 72,74
    MG:F:201 53~54,74
    MG:F:204 55,71
    8339 5z56:G
    (5.1Å)
    		 77 N/A N/A N/A unidentified
    adenovirus
    10535    		 29360106 Assembly1
    protein:A:25~2335 -11~-9,-6~-4,-2~-1,2,16
    protein:w:2~499 130~132
    protein:v:18~223 139~140
    protein:1:82~1304 136,142~144,146,148,152~154,15
    6~159,161
    protein:L:6~795 138~139
    protein:M:191~226 1~3
    protein:O:19~303 17~22,26~27
    protein:U:1~26 -11~-8
    rna:B:8~104 -5~-1
    rna:F:1~97 3~14,16~17
    rna:H:1~184 132~135,137~142,145~147
    8340 5z56:H
    (5.1Å)
    		 136 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 29360106
    M068_0.6

    1384

    504

    1212

    1373    		 Assembly1
    protein:A:25~2335 20~24,26,30
    protein:k:20~116 98,104~105
    protein:m:2~75 98~99,106
    protein:l:14~92 99,106
    protein:n:4~76 100,168
    protein:p:7~224 163~164,166~167,170
    protein:w:2~499 45~46
    protein:v:18~223 29,39~42
    protein:1:82~1304 31,33,36~37,56
    protein:2:461~689 56~57
    rna:F:1~97 1,3~11,20~22,25~28
    rna:G:-12~163 31~33,35~45
    8341 5z57:B
    (6.5Å)
    		 84 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 29360106
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    protein:A:25~2335 12,20,23,26~29,38~39,44~46,48~
    49,55~58
    protein:d:20~116 87,93~94
    protein:f:2~75 87~88
    protein:e:14~92 88,95
    protein:P:25~229 31~32,51~53
    protein:U:1~26 36~37,47
    rna:F:1~97 42~44
    rna:G:-12~163 40~44
    8342 5z57:F
    (6.5Å)
    		 93 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00001EC8D7 RF00026 Homo
    sapiens
    9606    		 29360106
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    protein:A:25~2335 18,21,55~57,64~73
    protein:2:461~689 42~45
    protein:J:216~802 60,93~95
    protein:L:6~795 48~49,60
    protein:N:1~143 1~2,19~24,27~28
    protein:O:19~303 23~24,26~30
    rna:B:8~104 66~67,69~70
    rna:G:-12~163 30,32~41,43~45,73
    rna:H:1~184 47~56,87~95,97
    MG:F:200 72,74
    MG:F:201 53~54,74
    MG:F:204 55,71
    8343 5z57:G
    (6.5Å)
    		 77 N/A N/A N/A unidentified
    adenovirus
    10535    		 29360106 Assembly1
    protein:A:25~2335 -11~-9,-6~-4,-2~-1,2,16
    protein:w:2~499 130~132
    protein:v:18~223 139~140
    protein:1:82~1304 136,142~144,146,148,152~154,15
    6~159,161
    protein:L:6~795 138~139
    protein:O:19~303 17~22,26~27
    protein:U:1~26 -11~-8
    rna:B:8~104 -5~-1
    rna:F:1~97 3~14,16~17
    rna:H:1~184 132~135,137~142,145~147
    8344 5z57:H
    (6.5Å)
    		 136 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 29360106
    M068_0.6

    1384

    504

    1212

    1373    		 Assembly1
    protein:A:25~2335 20~24,26,30
    protein:k:20~116 98,104~105
    protein:m:2~75 98~99,106
    protein:l:14~92 99,106
    protein:n:4~76 100,168
    protein:p:7~224 163~164,166~167,170
    protein:w:2~499 45~46
    protein:v:18~223 29,39~42
    protein:1:82~1304 31,33,36~37,56
    protein:2:461~689 56~57
    rna:F:1~97 1,3~11,20~22,25~28
    rna:G:-12~163 31~33,35~45
    8345 5z58:B
    (4.9Å)
    		 84 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 29360106
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    protein:A:25~2335 12~13,20,23,25~29,35,38~39,45,
    48~49,53,55~59
    protein:E:58~356 63~64
    protein:d:20~116 87,93~94
    protein:f:2~75 87~88
    protein:e:14~92 88,95
    protein:T:184~496 50~51
    rna:F:1~97 42~44
    rna:G:-12~163 40~44
    8346 5z58:F
    (4.9Å)
    		 93 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00001EC8D7 RF00026 Homo
    sapiens
    9606    		 29360106
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    protein:A:25~2335 18,21,29,55~57,64~71
    protein:2:461~689 42~45
    protein:J:216~802 60,93~95
    protein:L:6~235 48~49,60
    rna:B:8~104 66~67,69~70
    rna:G:-12~163 30,32~41,43~45,73
    rna:H:1~184 47~56,87~95,97
    MG:F:200 72,74
    MG:F:201 53~54,74
    MG:F:204 55,71
    8347 5z58:G
    (4.9Å)
    		 77 N/A N/A N/A unidentified
    adenovirus
    10535    		 29360106 Assembly1
    protein:A:25~2335 -9,-6~-4,2,16
    protein:w:2~499 130~132
    protein:1:82~1304 136,142~144,146,148,152~154,15
    6~159,161
    protein:L:6~235 138~139
    protein:M:191~226 1~3
    rna:B:8~104 -5~-1
    rna:F:1~97 3~14,16~17
    rna:H:1~184 132~135,137~142,145~147
    8348 5z58:H
    (4.9Å)
    		 136 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 29360106
    M068_0.6

    1384

    504

    1212

    1373    		 Assembly1
    protein:A:25~2335 20~24,26,30
    protein:k:20~116 98,104~105
    protein:m:2~75 98~99,106
    protein:l:14~92 99,106
    protein:n:4~76 100,168
    protein:p:7~224 163~164,166~167,170
    protein:w:2~499 45~46
    protein:1:82~1304 31,33,36~37,56
    protein:2:461~689 56~57
    rna:F:1~97 1,3~11,20~22,25~28
    rna:G:-12~163 31~33,35~45
    8349 5z71:A
    (2.5Å)
    		 19 N/A URS0000D77917 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:25 3~15,19~23
    GET:B:201 5~9
    8350 5z71:B
    (2.5Å)
    		 22 N/A URS0000D77917 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:2~23 26~31,33~39,42~46
    GET:B:201 39,41~43
    8351 5z98:C
    (2.2Å)
    		 10 N/A URS0000D77949 N/A unidentified
    32644    		 30060196 Assembly1
    protein:B:2~183 3~10
    protein:A-2:2~183 1~3
    rna:D:1~10 3~9
    8352 5z98:D
    (2.2Å)
    		 10 N/A URS0000D77946 N/A unidentified
    32644    		 30060196 Assembly1
    protein:B:2~183 1~3
    protein:A-2:2~183 5~10
    rna:C:1~10 3~9
    8353 5zal:C
    (4.7Å)
    		 58 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS0000D56C46 RF00027 Homo
    sapiens
    9606    		 29706542
    1011

    509    		 Assembly1
    protein:A:45~1913 1~4,13~15,24~28,70~73
    8354 5zam:C
    (5.7Å)
    		 44 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS0000D56C46 RF00027 Homo
    sapiens
    9606    		 29706542
    74

    1011

    509    		 Assembly1
    protein:A:45~1913 1~4,12~14,45~46,48~49,70~73
    8355 5zc9:B
    (2.0Å)
    		 10 N/A URS0000E60B98 N/A synthetic
    construct
    32630    		 30595437 Assembly1
    protein:A:29~406 2~9
    RCG:B:600 7~8
    8356 5zeb:A
    (3.4Å)
    		 3102 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    rna:a:9~1518 1919~1921,2053~2054,2063,2065,
    2136~2137,2140,2143~2144,2171~
    2173,2183~2185
    rna:v:1~77 2147,2288,2475~2477,2479,2674~
    2675
    rna:B:1~117 976~978,1031~1034,1068
    protein:f:1~96 1560,1611~1612
    protein:u:2~33 2049,2157~2158,2198~2199
    protein:C:3~275 805~807,809,820~821,843~844,87
    9,888,894~897,899,1646,1711,17
    20~1721,1785~1789,1911,1913,20
    05~2009,2013~2017,2020~2023,20
    29~2037,2040~2044,2058,2061~20
    62,2125~2127,2195~2196,2296,22
    98,2309,2427,2445,2814~2815,28
    21~2825
    protein:D:2~215 858~859,861,1248,1872~1875,188
    8,1893,2217,2222,2272~2277,273
    5~2737,2795~2796,2798~2799,280
    2~2804,2842~2846,2858~2862,290
    3~2907,2947~2948,2952~2955,299
    5~2997,3008~3010,3031~3032,304
    1,3043~3044,3051~3052,3054
    protein:E:3~209 34~35,402~405,422,529~532,537,
    539~540,557~558,678,681~682,68
    4,693,699~700,706,708~710,713,
    773~775,788~790,911~912,916,13
    19,1361~1363,1370~1373,2283~22
    85,2668~2669
    protein:F:6~186 2522,2526~2529,2531~2532,2534~
    2538
    protein:G:2~177 1230~1231,2750,2752,2754~2755,
    2877,2881~2882,2890~2891,2967~
    2973,2975,2981~2982
    protein:H:1~151 157~158,162~164,281~282,2315~2
    317,2319,2421~2422
    protein:I:1~126 1163~1165,1171~1173,1175,1201~
    1202,1224~1225
    protein:J:10~142 1176~1182,1194,1197~1199
    protein:K:1~147 3~4,615~616,623~625,642,649~65
    1,1113,1124~1125,1127,1129~113
    1,1140,1249~1250,1256~1260,126
    2,2264,2738,2863~2866,2992,300
    4
    protein:L:1~121 1882~1885,2176,2219~2220,2771,
    2785~2787,2789,2898~2900,2907~
    2909,2950
    protein:M:3~147 195,244~245,249,658,679~680,69
    0~691,714,718~721,724~728,730~
    731,776~778,781,920,922,925~92
    8,940~941,946~948,1059~1060,13
    04~1308,1317~1319,1358,1360,13
    64~1365,2583~2584,2616~2618,26
    30,2638~2641,2652
    protein:N:1~134 986~987,989~990,1020,1022,1024
    ~1027,1070~1075,1077,1147~1148
    ,1193~1194,2474~2475,2500~2501
    ,2691~2693,2707~2709,2719~2720
    protein:O:2~118 1390,1392~1394,1402,1409~1410,
    1674~1675,1867~1871,2225~2226,
    2233,2913~2914,2930,2932,3043,
    3060~3062,3071~3072,3090,3092~
    3094,3101~3103
    protein:P:2~127 2517~2520,2540,2558~2559,2600~
    2601
    protein:Q:1~113 1970~1971,2906,2908~2909,2942~
    2943,3063~3064,3068~3070,3096~
    3097
    protein:R:2~125 15~16,26,533,535,619~623,651~6
    53,655,672~676,1110~1116,1127~
    1130,1268~1273,1275,1312~1314,
    1330~1331,1342,1363,1365~1367,
    2242~2245
    protein:S:2~103 641,656~657,659,663~665,929~93
    0,1108,1110~1112,1279~1282,130
    2~1303,1336~1339
    protein:T:6~119 20~22,574~575,577~578,580~582,
    595,604~606,862~863,866,1375,1
    377,1381,1436~1440,1832~1833,2
    234~2238
    protein:U:4~97 55~56,61,141~142,544,1451~1457
    ,1507~1508,1815~1819
    protein:V:1~105 81~83,378~379,381,383,409~411,
    417,568~569,571~572,585~587
    protein:X:5~86 758~759,970~973,1037~1038,2485
    ~2487,2494~2495,2502~2503,2553
    ~2558,2560,2576~2578,2580~2581
    ,2588~2590,2610
    protein:Y:2~64 164~165,187~188,198~200,460,46
    7~470,475,483~487,1479~1480,23
    02~2303,2313~2315,2422~2424,24
    41~2442,2452~2456
    protein:Z:5~67 57~58,69,72~74,92~94,109
    protein:1:2~61 964~966,1035,1041~1044,1085~10
    87,1106~1107,1116~1118,1277
    protein:3:2~55 12~13,605,1377~1381,2239~2241,
    2243,2245,2269~2270,2279~2281,
    2838~2839,3036,3103,3105~3108
    protein:4:6~55 2508~2510,2568~2569,2571~2572,
    2594~2595,2643,2645
    protein:5:3~47 50~51,121~123,209~210,546~547,
    552~557,797,799,801~803,868~86
    9,885~886,1424,1472,1482~1483,
    1830~1831,1837~1838
    protein:6:2~64 242~243,246~247,250~251,253,68
    3,685,723~725,745~746,950,2572
    ,2574~2575,2583,2585~2587,2615
    ~2618,2643~2644
    protein:7:1~37 1149~1150,1242~1243,2689~2691,
    2701~2702,2750~2753,2763,2966~
    2967,2978,2980~2981
    protein:8:2~24 1065~1066,1078,1096~1097,1100,
    1102~1104,1120~1121,1144,1252,
    2252~2253,2255,2679~2681,2713
    8357 5zeb:B
    (3.4Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000047BBB1 RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:F:6~186 30,33,41~43,45,55~57
    protein:P:2~127 7~9,27~30,46~52,57~60,110~111
    protein:W:6~193 73~77,80,90~93,100~101
    protein:1:2~61 82~83
    protein:2:1~66 40,42~44
    rna:A:2~3119 78~81,88,94~97
    8358 5zeb:a
    (3.4Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:c:1~210 421,512,1035~1038,1041~1042,10
    86~1089,1091~1092,1170~1175,11
    86~1187
    protein:e:17~214 10~13,19~20,22~23,540,846,903~
    905,1050~1051,1053,1058~1061,1
    379~1381
    protein:g:1~156 673~674,914~915,917,920~922,12
    20~1222,1272~1273,1279~1280,13
    27~1328,1331~1333,1355,1357~13
    60,1362~1364
    protein:h:3~132 567,569~571,578~580,622~623,63
    2~633,804~808,856~860
    protein:i:25~150 951~952,1097~1099,1128~1130,11
    59~1161,1168,1213~1214,1229~12
    31,1273,1324~1332,1350~1351,13
    53~1356
    protein:j:5~101 945~946,951,954~955,1039~1042,
    1106,1131~1133,1179~1180,1260~
    1261,1349
    protein:k:22~138 654~655,663~664,666~672,674~67
    5,686~687,696,698,758~759,776,
    1490,1506
    protein:l:2~123 37,39~41,363,482~483,500~502,5
    05~506,509,517~518,531~533,542
    ~544,547~548,739,862~864,893~8
    94,1476
    protein:o:2~88 559,561~562,636~639,647~649,70
    8,710,719~722,730~731,733~734,
    744,789
    protein:q:6~97 123~127,136~137,193~195,200,22
    5~227,234~236,253~254,264~265,
    273,275~277,280,544,565,625
    protein:r:16~79 653~654,698~701,714~716,814~81
    6,827
    protein:s:6~83 938~941,967~968,997~998,1201~1
    204,1206~1207,1295,1300~1303
    protein:t:3~86 64,100,103~104,129,182,184~185
    ,206~209,260~262,322~324,326,3
    31~333,350,1420~1422,1442~1443
    protein:n:2~61 955~957,961~964,977,1027~1029,
    1039~1040,1094,1168~1170,1183~
    1184,1197,1199~1200,1299,1340~
    1342,1351
    protein:b:1~228 808~812,1053~1055,1077~1078,10
    80~1085,1140
    protein:d:2~201 12,32,401~409,413,426~427,436~
    439,488~492,521~527,593,599~60
    0
    protein:f:1~96 642~643,653~654,690~691,715~71
    9
    protein:m:2~117 930~934,1206~1210,1278~1279,12
    83~1284,1289~1291,1303~1304,13
    10~1312
    protein:p:2~114 47~48,106,108,228~230,310,375~
    377,390~393,449,452,587~589,59
    7,602~606
    protein:u:2~33 551,872~873,884,897~899,1377,1
    388~1389,1470~1471,1484,1493~1
    495,1498,1502,1504,1513
    protein:C:3~275 692~693,753
    protein:L:1~121 338~339,1404~1405
    protein:Q:1~113 345~346,1414~1415,1425,1447
    rna:v:1~77 770,948,1210~1211,1320~1322,13
    83
    rna:A:2~3119 682,763~764,1390~1392,1401~140
    2,1412,1457~1459,1467~1468,147
    7~1480,1501
    8359 5zeb:v
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 30206241 Assembly1
    rna:a:9~1518 31~32,35,39~42
    rna:A:2~3119 2,12,25,75~77
    protein:F:6~186 57~58
    protein:X:5~86 1~2,74~75
    8360 5zeg:A
    (2.4Å)
    		 23 N/A URS000086854A N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:B:24~46 3~16,19~23
    8361 5zeg:B
    (2.4Å)
    		 23 N/A URS000086854A N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:A:1~23 26~39,41~46
    8362 5zeg:C
    (2.4Å)
    		 23 N/A URS000086854A N/A synthetic
    construct
    32630    		 29036479 Assembly2
    rna:C-2:1~23 3~16,19~23
    8363 5zei:A
    (2.1Å)
    		 22 N/A URS0000D56C3E N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:B:26~46 3~16,19~23
    GET:A:101 16~20
    GET:B:101 5~9
    8364 5zei:B
    (2.1Å)
    		 21 N/A URS0000D56C39 N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:A:2~23 26~39,42~46
    GET:A:101 27~31
    GET:B:101 39~43
    8365 5zej:A
    (3.5Å)
    		 22 N/A URS0000D56C3E N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:B:25 3~16,19~23
    PAR:B:101 6,8
    8366 5zej:B
    (3.5Å)
    		 22 N/A URS0000D56C3E N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:A:2~23 26~34,36~39,42~46
    PAR:B:101 39~43
    8367 5zem:A
    (3.103Å)
    		 22 N/A URS0000D56C3E N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:B:26~46 3~16,19~23
    8368 5zem:B
    (3.103Å)
    		 21 N/A URS0000D56C3E N/A synthetic
    construct
    32630    		 29036479 Assembly1
    rna:A:2~23 26~31,33,35~39,42~46
    8369 5zep:A
    (3.4Å)
    		 3102 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    rna:a:9~1518 1919,2065,2136~2138,2143~2144,
    2172~2173
    rna:w:1~77 2068~2069,2645
    rna:B:1~117 976~978,1031~1034,1068
    protein:f:1~96 1560,1611~1612
    protein:u:2~33 2049,2157~2158
    protein:0:1~459 1589~1590
    protein:C:3~275 805~807,809,820~821,843~844,87
    9,888,894~897,899,1646,1711,17
    20~1721,1785~1790,1911,1913,20
    05~2009,2013~2017,2020~2023,20
    29~2037,2040~2044,2058,2061~20
    62,2125~2127,2195~2196,2296,22
    98,2309,2427,2445,2814~2815,28
    21~2825
    protein:D:2~215 858~859,861,1248,1872~1875,188
    8,1893,2217,2222,2256,2272~227
    7,2735~2737,2795~2796,2798~279
    9,2802~2804,2842~2846,2858~286
    2,2903~2907,2947~2948,2952~295
    5,2995~2997,3008~3010,3031~303
    2,3041,3043~3044,3051~3052,305
    4
    protein:E:3~209 34~35,402~405,422,529~532,537,
    539~540,557~558,678,681~682,68
    4,693,699~700,706,708~710,713,
    773~775,788~790,911~912,916,13
    19,1361~1363,1370~1373,2283~22
    85,2668~2669
    protein:F:6~186 2522,2526~2529,2531~2532,2534~
    2538
    protein:G:2~177 1230~1231,2750,2752,2754~2755,
    2877,2881~2882,2890~2891,2967~
    2973,2975,2981~2982
    protein:H:1~151 157~158,162~164,281~282,2315~2
    317,2319,2421~2422
    protein:I:1~126 1163~1165,1171~1173,1175,1201~
    1202,1224~1225
    protein:J:10~142 1176~1182,1194,1197~1199
    protein:K:1~147 3~4,615~616,623~625,642,649~65
    1,1113,1124~1125,1127,1129~113
    1,1140,1249~1250,1256~1260,126
    2,2264,2738,2863~2866,2992,300
    4
    protein:L:1~121 1882~1885,2176,2219~2220,2771,
    2785~2787,2789,2898~2900,2907~
    2909,2950
    protein:M:3~147 195,244~245,249,658,679~680,69
    0~691,714,718~721,724~728,730~
    731,776~778,781,920,922,925~92
    8,940~941,946~948,1059~1060,13
    04~1308,1317~1319,1358,1360,13
    64~1365,2583~2584,2616~2618,26
    30,2638~2641,2652
    protein:N:1~134 986~987,989~990,1020,1022,1024
    ~1027,1070~1075,1077,1147~1148
    ,1193,2474~2475,2500~2501,2691
    ~2693,2707~2709,2719~2720
    protein:O:2~118 1390,1392~1394,1402,1409~1410,
    1674~1675,1867~1871,2225~2226,
    2233,2913~2914,2930,2932,3043,
    3060~3062,3071~3072,3090,3092~
    3094,3101~3103
    protein:P:2~127 2517~2520,2540,2558~2559,2600~
    2601
    protein:Q:1~113 1970~1971,2906,2908~2909,2942~
    2943,3063~3064,3068~3070,3096~
    3097
    protein:R:2~125 15~16,26,533,535,619~623,651~6
    53,655,672~676,1110~1116,1127~
    1130,1268~1273,1275,1312~1314,
    1330~1331,1342,1363,1365~1367,
    2242~2245
    protein:S:2~103 641,656~657,659,663~665,929~93
    0,1108,1110~1112,1279~1282,130
    2~1303,1336~1339
    protein:T:6~119 20~22,574~575,577~578,580~582,
    595,604~606,862~863,866,1375,1
    377,1381,1436~1440,1832~1833,2
    234~2238
    protein:U:4~97 55~56,61,141~142,544,1451~1457
    ,1507~1508,1815~1819
    protein:V:1~105 81~83,378~379,381,383,409~411,
    417,568~569,571~572,585~587
    protein:X:5~86 758~759,970~973,1037~1038,2485
    ~2487,2494~2495,2502~2503,2553
    ~2558,2560,2576~2578,2580~2581
    ,2588~2590,2610
    protein:Y:2~64 164~165,187~188,198~200,460,46
    7~470,475,483~487,1479~1480,23
    02~2303,2313~2315,2422~2424,24
    41~2442,2452~2456
    protein:Z:5~67 57~58,69,72~74,92~94,109
    protein:v:2~61 964~966,1035,1041~1044,1085~10
    87,1106~1107,1116~1118,1277
    protein:z:2~55 12~13,605,1377~1381,2239~2241,
    2243,2245,2269~2270,2279~2281,
    2838~2839,3036,3103,3105~3108
    protein:1:6~55 2508~2510,2568~2569,2571~2572,
    2594~2595,2643,2645
    protein:2:3~47 50~51,121~123,209~210,546~547,
    552~557,797,799,801~803,868~86
    9,885~886,1424,1472,1482~1483,
    1830~1831,1837~1838
    protein:3:2~64 242~243,246~247,250~251,253,68
    3,685,723~725,745~746,950,2572
    ,2574~2575,2583,2585~2587,2615
    ~2618,2643~2644
    protein:4:1~37 1149~1150,1242~1243,2689~2691,
    2701~2702,2750~2753,2763,2966~
    2967,2978,2980~2981
    protein:5:2~24 1065~1066,1078,1096~1097,1100,
    1102~1104,1120~1121,1144,1252,
    2252~2253,2255,2679~2681,2713
    8370 5zep:B
    (3.4Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000047BBB1 RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:F:6~186 33,41~43,45,54~57
    protein:P:2~127 7~9,27~30,46~52,57~60,110~111
    protein:W:6~191 73~77,80,90~93,100~101
    protein:v:2~61 82~83
    protein:y:1~66 40,42~44
    rna:A:2~3119 78~81,88,94~97
    8371 5zep:a
    (3.4Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:c:1~210 421,512,1035~1038,1041~1042,10
    86~1089,1091~1092,1170~1175,11
    86~1187
    protein:e:17~214 10~13,19~20,22~23,540,846,903~
    905,1050~1051,1053,1058~1061,1
    379~1381
    protein:g:1~156 673~674,914~915,917,920~922,12
    20~1222,1272~1273,1279~1280,13
    27~1328,1331~1333,1355,1357~13
    60,1362~1364
    protein:h:3~132 567,569~571,578~580,622~623,63
    2~633,804~808,856~860
    protein:i:25~150 951~952,1097~1099,1109~1110,11
    28~1130,1159~1161,1168,1211,12
    13~1214,1229~1231,1273,1324~13
    32,1350~1351,1353~1356
    protein:j:5~101 945~946,954~955,1039~1042,1106
    ,1131~1133,1178~1180,1260~1261
    ,1349
    protein:k:22~138 654~655,663~664,666~672,674~67
    5,686~687,696,698,758~759,776,
    1490,1506
    protein:l:2~123 37,39~41,363,482~483,500~502,5
    05~506,509,517~518,531~533,542
    ~544,547~548,739,862~864,893~8
    94,1476
    protein:o:2~88 559,561~562,636~639,647~649,70
    8,710,719~722,730~731,733~734,
    744,789
    protein:q:6~97 123~127,136~137,193~195,200,22
    5~227,234~236,253~254,264~265,
    273,275~277,280,544,565,625
    protein:r:16~79 653~654,698~701,714~716,814~81
    6,827
    protein:s:6~83 938~941,967~968,997~998,1201~1
    204,1206~1207,1295,1300~1303
    protein:t:3~86 64,100,103~104,129,182,184~185
    ,206~209,260~262,322~324,326,3
    31~332,349~350,1420~1422,1442~
    1443
    protein:n:2~61 955~957,961~964,977,1027~1029,
    1039~1040,1094,1168~1170,1183~
    1184,1197,1199~1200,1299,1340~
    1342,1351
    protein:b:1~228 808~812,1053~1055,1077~1078,10
    80~1085,1140
    protein:d:2~201 12,32,401~409,413,426~427,436~
    439,488~492,521~527,593,599~60
    0
    protein:f:1~96 642~643,653~654,690~691,715~71
    9
    protein:m:2~117 930~934,1206~1210,1278~1279,12
    83~1284,1289~1291,1303~1304,13
    10~1312
    protein:p:2~114 47~48,106,108,228~230,310,375~
    377,390~393,449,452,587~589,59
    7,602~606
    protein:u:2~33 551,872~873,884,897~899,1377,1
    388~1389,1470~1471,1484,1493~1
    495,1498,1502,1504,1513
    protein:x:31~130 510,512,673~674,769~770,908,93
    5~936,946~949,951,1032~1035,11
    77,1210~1211,1321~1323,1383,14
    77
    protein:L:1~121 338,1405
    protein:Q:1~113 345~346,1414~1415,1425,1447
    protein:y:1~66 1293~1294
    rna:w:1~77 1322,1365~1366
    rna:A:2~3119 682,1390~1392,1401~1402,1458~1
    459,1477~1479,1501
    8372 5zep:w
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 30206241 Assembly1
    protein:g:1~156 31~34,38~43
    protein:k:22~138 40~41
    protein:x:31~130 36~39
    rna:A:2~3119 71~73,77
    8373 5zet:A
    (3.2Å)
    		 3102 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:C:3~275 805~807,809,820~821,843~844,87
    9,888,894~897,899,1646,1711,17
    20~1721,1785~1789,1911,1913,20
    05~2009,2013~2017,2020~2023,20
    29~2037,2040~2044,2058,2061~20
    62,2125~2127,2195~2196,2296,22
    98,2309,2427,2445,2814~2815,28
    21~2825
    protein:D:2~215 858~859,861,1248,1872~1875,188
    8,1893,2217,2222,2256,2272~227
    7,2735~2737,2795~2796,2798~279
    9,2802~2804,2842~2846,2858~286
    2,2903~2907,2947~2948,2952~295
    5,2995~2997,3008~3010,3031~303
    2,3041,3043~3044,3051~3052,305
    4
    protein:E:3~209 34~35,402~405,422,529~532,537,
    539~540,557~558,678,681~682,68
    4,693,699~700,706,708~710,713,
    773~775,788~790,911~912,916,13
    19,1361~1363,1370~1373,2283~22
    85,2668~2669
    protein:F:6~186 2522,2526~2529,2531~2532,2534~
    2538
    protein:G:2~177 1230~1231,2750,2752,2754~2755,
    2877,2881~2882,2890~2891,2967~
    2973,2975,2981~2982
    protein:H:1~151 157~158,162~164,281~282,2315~2
    317,2319,2421~2422
    protein:I:1~126 1163~1165,1171~1173,1175,1201~
    1202,1224~1225
    protein:J:10~142 1176~1182,1194,1197~1199
    protein:K:1~147 3~4,615~616,623~625,642,649~65
    1,1113,1124~1125,1127,1129~113
    1,1140,1249~1250,1256~1260,126
    2,2264,2738,2863~2866,2992,300
    4
    protein:L:1~121 1882~1885,2176,2219~2220,2771,
    2785~2787,2789,2898~2900,2907~
    2909,2950
    protein:M:3~147 195,244~245,249,658,679~680,69
    0~691,714,718~721,724~728,730~
    731,776~778,781,920,922,925~92
    8,940~941,946~948,1059~1060,13
    04~1308,1317~1319,1358,1360,13
    64~1365,2583~2584,2616~2618,26
    30,2638~2641,2652
    protein:N:1~134 986~987,989~990,1020,1022,1024
    ~1027,1070~1075,1077,1147~1148
    ,1193~1194,2474~2475,2500~2501
    ,2691~2693,2707~2709,2719~2720
    protein:O:2~118 1390,1392~1394,1402,1409~1410,
    1674~1675,1867~1871,2225~2226,
    2233,2913~2914,2930,2932,3043,
    3060~3062,3071~3072,3090,3092~
    3094,3101~3103
    protein:P:2~127 2517~2520,2540,2558~2559,2600~
    2601
    protein:Q:1~113 1970~1971,2906,2908~2909,2942~
    2943,3063~3064,3068~3070,3096~
    3097
    protein:R:2~125 15~16,26,533,535,619~623,651~6
    53,655,672~676,1110~1116,1127~
    1130,1268~1273,1275,1312~1314,
    1330~1331,1342,1363,1365~1367,
    2242~2245
    protein:S:2~103 641,656~657,659,663~665,929~93
    0,1108,1110~1112,1279~1282,130
    2~1303,1336~1339
    protein:T:6~119 20~22,574~575,577~578,580~582,
    595,604~606,862~863,866,1375,1
    377,1381,1436~1440,1832~1833,2
    234~2238
    protein:U:4~97 55,61~62,141~142,544,1450~1457
    ,1507~1508,1815~1819
    protein:V:1~105 81~83,378~379,381,383,409~411,
    417,568~569,571~572,585~587
    protein:X:5~86 757~759,970~973,1037~1038,2485
    ~2487,2494~2495,2502~2503,2553
    ~2558,2560,2576~2578,2580~2581
    ,2588~2590,2610
    protein:Y:2~64 164~165,187~188,198~200,460,46
    7~470,475,483~487,1479~1480,23
    02~2303,2313~2315,2422~2424,24
    41~2442,2452~2456
    protein:Z:5~67 57~58,69,72~74,92~94,108~109
    protein:1:2~61 964~966,1035,1041~1044,1085~10
    87,1106~1107,1116~1118,1277
    protein:3:2~55 12~13,605,1377~1381,2239~2241,
    2243,2245,2269~2270,2279~2281,
    2838~2839,3036,3103,3105~3108
    protein:4:6~55 2508~2510,2568~2569,2571~2572,
    2594~2595,2643,2645
    protein:5:3~47 50~51,121~123,209~210,546~547,
    552~557,797,799,801~803,868~86
    9,885~886,1424,1472,1482~1483,
    1830~1831,1837~1838
    protein:6:2~64 242~243,246~247,250~251,253,68
    3,685,723~725,745~746,950,2572
    ,2574~2575,2583,2585~2587,2615
    ~2618,2643~2644
    protein:7:1~37 1149~1150,1242~1243,2689~2691,
    2701~2702,2750~2753,2763,2966~
    2967,2978,2980~2981
    protein:8:2~24 1065~1066,1078,1096~1097,1100,
    1102~1104,1120~1121,1144,1252,
    2252~2253,2255,2679~2681,2713
    rna:B:1~117 976~978,1031~1034,1068
    8374 5zet:B
    (3.2Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000047BBB1 RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:F:6~186 33,41~43,45,54~55,57
    protein:P:2~127 7~9,27~30,46~52,58~60,110~111
    protein:W:6~193 73~77,80,90~93,100~101
    protein:1:2~61 82~83
    protein:2:1~66 40,42~44
    rna:A:2~3119 78~81,88,94~97
    8375 5zeu:a
    (3.7Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:c:1~210 421,512,1035~1038,1041~1042,10
    86~1089,1091~1092,1170~1175,11
    86~1187
    protein:e:17~214 10~13,19~20,22~23,540,846,903~
    905,1050~1051,1053,1058~1061,1
    379~1381
    protein:g:1~156 673~674,914~915,917,920~922,12
    20~1222,1272~1273,1279~1280,13
    27~1328,1331~1333,1355,1357~13
    60,1362~1364
    protein:h:3~132 567,569~571,578~580,622~623,63
    2~633,804~808,856~860
    protein:i:25~150 951~952,1097~1099,1128~1130,11
    59~1161,1168,1213~1214,1229~12
    31,1273,1324~1332,1350~1351,13
    53~1356
    protein:j:5~101 945~946,951~952,954,1039~1042,
    1106,1131~1133,1179~1180,1260~
    1261,1349
    protein:k:22~138 654~655,663~664,666~672,674~67
    5,686~687,696,698,758~759,776,
    1490,1506
    protein:l:2~123 37,39~41,363,482~483,500~502,5
    05~506,509,517~518,531~533,542
    ~544,547~548,739,862~864,893~8
    94,1476
    protein:o:2~88 559,561~562,636~639,647~649,70
    8,710,719~722,730~731,733~734,
    744,789
    protein:q:6~97 123~127,136~137,193~195,200,22
    5~227,234~236,253~254,264~265,
    273,275~277,280,544,565,625
    protein:r:16~79 653~654,698~701,714~716,814~81
    6,827
    protein:s:6~83 938~941,967~968,997~998,1201~1
    204,1206~1207,1295,1300~1303
    protein:t:3~86 64,100,103~104,129,182,184~185
    ,206~209,260~262,322~324,326,3
    31~332,349~350,1420~1422,1442~
    1443
    protein:n:2~61 955~957,961~964,977,1027~1029,
    1039~1040,1094,1168~1170,1183~
    1184,1197,1199~1200,1299,1340~
    1342,1351
    protein:b:1~228 808~812,1053~1055,1077~1078,10
    80~1085,1140
    protein:d:2~201 12,32,401~409,413,426~427,436~
    439,488~492,521~527,593,599~60
    0
    protein:f:1~96 642~643,653~654,690~691,715~71
    9
    protein:m:2~117 930~934,1206~1210,1278~1279,12
    83~1284,1289~1291,1303~1304,13
    10~1312
    protein:p:2~114 47~48,106,108,228~230,310,375~
    377,390~393,449,452,587~589,59
    7,602~606
    protein:u:2~33 551,872~873,884,897~899,1377,1
    388~1389,1470~1471,1484,1493~1
    495,1498,1502,1504,1513
    rna:v:1~77 770,948,1210~1211,1320~1322,13
    83
    8376 5zeu:v
    (3.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 30206241 Assembly1
    rna:a:9~1518 31~32,35,39~42
    8377 5zey:A
    (12.5Å)
    		 369 GO:0006401 (P) RNA catabolic process URS00004493AF RF00023 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 30206241 Assembly1
    protein:C:1~161 7~8,13,17~18,90~94,334,342,360
    ~362
    8378 5zey:B
    (12.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 30206241 Assembly1
    rna:A:1~369 35~36
    8379 5zkj:C
    (2.798Å)
    		 12 N/A URS0000E60B63 N/A synthetic
    construct
    32630    		 30949702 Assembly1
    protein:B:56~358 1~4
    dna:D:1~12 1~12
    MG:C:101 2~3
    8380 5zkj:E
    (2.798Å)
    		 12 N/A URS0000E60B63 N/A synthetic
    construct
    32630    		 30949702 Assembly1
    protein:A:56~352 1~4
    dna:F:1~12 1~7,9~10,12
    MG:A:401 2~3
    8381 5zlu:DD
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000D77933 RF00005 Thermus
    thermophilus
    HB8
    300852    		 29712846 Assembly1
    rna:W:14~20 35,37~38
    rna:G:5~1542 31~32,35,39,41~42
    protein:O:2~128 34~35
    protein:c:4~182 56~58
    protein:EE:1~490 17,20~21,57,72~76
    8382 5zlu:G
    (3.6Å)
    		 1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D7794C RF00177 Thermus
    thermophilus
    HB8
    300852    		 29712846 Assembly1
    rna:W:14~20 693,926,1397,1400~1401
    rna:V:5~2898 702,1407~1409,1418,1429,1483,1
    492~1495,1517
    rna:DD:1~77 790,966,1230,1338~1340,1400
    protein:A:2~98 130,189~190,234~235,237,253~25
    5,264~267,276~280,760
    protein:B:16~88 674,718~719,721,734~736,835
    protein:C:8~106 106~108,175,177,186A,186B,191F
    ,191~193,195~196,259,261~263,3
    22~324,1438
    protein:D:1~81 957,986,1014,1220~1223,1225~12
    26,1311~1313,1318~1320,1322
    protein:E:3~100 964,972~973,1060~1061,1124~112
    5,1150~1152,1252~1254,1367
    protein:F:2~25 1243,1267~1268,1289,1305~1306,
    1325~1328,1364
    protein:H:7~228 828~829,843,1074~1075,1098~109
    9,1101,1104
    protein:I:2~207 532,1055,1060~1061,1108,1112~1
    113,1189~1191,1205
    protein:J:2~209 8,403~404,407~409,412~413,429~
    430,436~437,491,509,511~512,54
    1~543,545~547,619~620
    protein:K:5~154 6~9,16,559~560,921,1070,1074,1
    079~1081,1396,1398
    protein:L:1~101 671,710,737~739
    protein:M:2~156 693,932~933,935,939,1239~1240,
    1298,1346,1351,1372,1374~1381
    protein:N:1~138 590~591,599,640,642,653,824,82
    6,828,875~878
    protein:O:2~128 1117~1118,1130,1147,1179,1187,
    1232,1249~1251,1291,1342~1343,
    1345,1347,1350~1351,1368~1372
    protein:P:11~129 675~676,683~684,688~692,695,70
    4,706~707,716~718,778,796
    protein:Q:5~128 33,35~37,302,363,500~503,521~5
    23,525,537~539,551~553,562~564
    ,585,880~881
    protein:R:2~115 948~950,954,1225~1229,1295~129
    6,1302,1308,1328~1330
    protein:S:2~61 974,976,979~980,1048,1060,1187
    ,1202~1203,1216,1316~1317,1358
    ~1359,1369
    protein:T:2~89 658~659,667,728,740,750~751,80
    8
    protein:U:1~83 110,112,135~137,227,229,310,37
    5~377,390~393,452,468,474
    protein:h:1~122 1422~1423
    protein:m:1~117 345,1431~1432,1463,1465
    protein:EE:1~490 1299~1300,1335
    8383 5zlu:V
    (3.6Å)
    		 2875 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D7791D RF02541 Thermus
    thermophilus
    HB8
    300852    		 29712846 Assembly1
    rna:G:5~1542 1703,1847,1912~1913,1919~1920,
    1948,1959~1960
    rna:X:-1~120 861,863,918
    protein:Y:1~228 2123~2130,2132,2152~2153,2174~
    2178
    protein:Z:2~274 691~692,694,727~729,764,779,78
    2,784,1371,1424~1425,1490~1491
    ,1500,1565~1569,1693,1695,1788
    ~1792,1796~1801,1803,1805,1812
    ~1813,1815~1820,1822~1827,1830
    ,1843,1901,1971,2076,2085,2208
    ,2227,2590,2600
    protein:a:1~206 1130,1654~1655,1657~1658,1675,
    1993,2025,2052~2053,2511~2512,
    2571~2572,2574~2575,2579~2580,
    2618~2621,2633,2635~2636,2678~
    2680,2682,2723~2724,2729~2730,
    2733~2734,2772~2773,2784,2786~
    2787,2809~2811,2820,2822
    protein:b:3~210 319~321,323,441~443,449,451,46
    8~469,588,601,605~606,614,616,
    618A,659~660,673~674,796,801,1
    202,1204,1248,1255~1257,2059,2
    444~2445
    protein:c:4~182 2303~2306,2312~2314,2316
    protein:d:2~177 1048,1111,1113,2530~2531,2653,
    2666~2668,2745~2749,2751,2758
    protein:e:5~130 1044,1046~1047,1055~1058,1082~
    1085,1106~1108
    protein:f:4~137 1059,1061~1063,1066~1068,1070,
    1075,1077~1079,1081,1095~1096
    protein:g:2~118 9,528,558,995,1006,1022,1131~1
    132,1137~1140,1142,1142A,2039,
    2041~2042,2641~2642,2768
    protein:h:1~122 1665~1666,1952,2547,2562,2674~
    2675,2684~2685,2726
    protein:i:5~149 195,244~246,252,389,587,598~59
    9,626,631~632,637,660~663,807,
    810~811,813~814,825,832~833,94
    1~943,1190,1193,1245,1247,2392
    ~2394,2406
    protein:j:6~141 863,865,869~872,904~907,909~91
    1,954~956,960,1030,2250~2251,2
    275~2277,2467,2484~2485,2496
    protein:k:2~118 1275~1277,1279,1287,1294,1453~
    1454,1649,1651,1654,2712A,2713
    ,2722,2820~2822,2839,2850,2873
    ,2880,2882
    protein:l:3~112 2295,2320,2334~2335,2376,2378~
    2379
    protein:m:1~117 1754,2718,2845,2847~2849,2867,
    2875~2876
    protein:n:2~118 18,445,449,531~536,561,580~581
    ,583,993,995,997~998,1009~1011
    ,1151,1153~1156,1216~1217,1227
    ,1248,1252,2019,2021
    protein:o:1~101 565,814,992,1160~1163,1187,122
    4~1225
    protein:p:1~110 486~487,494~495,517,519,748,75
    1,1266,1322~1323,1614~1615,201
    0~2012
    protein:q:3~96 64~65,138,143,456,1312,1336,13
    41,1398~1399,1599
    protein:r:1~110 84~85,298,302,310,327,329,336~
    338,478~480,483~484
    protein:s:1~180 874~875,895~896,903~905
    protein:t:6~85 855~856,858,923,2261,2277~2278
    ,2330~2331,2334,2352~2357,2364
    ~2365,2384,2386~2387
    protein:u:1~67 61,74~77,95~97,111~112
    protein:v:2~60 849~852,931~932,969,988~989,11
    84
    protein:w:1~71 372~373,380~381,387~388,396~39
    8,400,1363~1366,1809,2079~2080
    ,2090~2091,2213,2229~2231,2432
    protein:x:4~60 14~16,517,1263~1264,1266,2015~
    2021,2046,2056~2057,2577,2814~
    2816,2884,2886
    protein:y:5~53 2285~2286,2345,2347,2371~2372,
    2399,2419
    protein:z:1~49 53,124~126,180,458~459,464~469
    ,684,686~687,770~771,788,1309~
    1310,1368,1612~1613
    protein:AA:1~64 242~243,245,247,249,253,592~59
    3,630~632,647~648,650,666~667,
    2348,2360~2361,2365,2392~2394,
    2418~2420,2422
    protein:BB:1~37 1030~1031,1034,1090~1091,1124,
    2464~2467,2477~2478,2527~2528,
    2742,2755~2757
    protein:EE:1~490 1859,1885,2061~2062,2064,2112,
    2252,2436~2438,2450,2492,2504~
    2507,2553,2583,2585,2595~2597,
    2601~2602
    8384 5zlu:X
    (3.6Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    HB8
    300852    		 29712846 Assembly1
    rna:V:5~2898 79,96,100
    protein:c:4~182 41~43,45,57
    protein:j:6~141 90~91
    protein:l:3~112 7~9,28~29,37,47~51,113~116
    protein:s:1~180 73,75~77,102~104
    protein:CC:1~32 40,43
    8385 5zq8:C
    (2.18Å)
    		 12 N/A URS0000D77918 N/A Streptococcus
    pneumoniae
    TIGR4
    170187    		 30388185 Assembly1
    protein:B:1~454 743~751
    8386 5zq8:D
    (2.18Å)
    		 12 N/A URS0000D77918 N/A Streptococcus
    pneumoniae
    TIGR4
    170187    		 30388185 Assembly2
    protein:A:1~454 743~752
    8387 5ztm:C
    (2.899Å)
    		 49 N/A N/A N/A Drosophila
    melanogaster
    7227    		 30649456 Assembly1
    protein:A:1~247 119~122,124~127,147~150,152~15
    5,158~160,164~165
    protein:B:1~247 116~117,122~123,126~128,151~15
    3,157~159
    8388 5zw4:D
    (1.7Å)
    		 16 N/A URS0000D77951 N/A Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 29982645 Assembly1
    protein:A:2~217 30~34
    8389 5zwm:B
    (3.4Å)
    		 175 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 32~33,35~36,76,80~85,95~96,99~
    106,111~113,115
    protein:E:3~141 97~98
    protein:C:102~975 1,45,74~75,163
    protein:a:8~103 162~163,171~172
    protein:c:20~110 174,177
    rna:F:1~112 96~100
    8390 5zwm:F
    (3.4Å)
    		 99 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000D7792B RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 1,21~22,26~27,30~33,43,45,48~5
    0
    protein:K:22~465 74~75
    protein:L:39~462 56~57,59~63
    protein:J:108~466 60~61,63,65~66,71~73,79~87
    protein:E:3~141 30~32,34
    protein:M:1~126 77~78
    rna:I:1~154 56~81
    rna:B:1~183 26~30
    rna:H:3~1169 92~102
    8391 5zwm:G
    (3.4Å)
    		 44 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    rna:H:3~1169 488~500,502~504
    protein:1:156~971 498~502,504~506,509~510,513~51
    6,518,521
    protein:4:9~203 480~484
    protein:5:2~104 500~505,507
    protein:X:2~129 520~522
    protein:u:2~528 485~486,488
    protein:v:34~253 487,494~497
    8392 5zwm:H
    (3.4Å)
    		 206 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    rna:F:1~112 3~13
    rna:G:479~522 33~46
    protein:h:6~102 116~117,119
    protein:i:10~92 113,120
    protein:j:12~83 112~113,119~120
    protein:k:2~76 114~115
    protein:l:4~84 115,1094,1115,1149~1150
    protein:m:1~109 110,116~117,119,121~122
    protein:n:44~108 111~112,118~119,121
    protein:1:156~971 32,34~38,57
    protein:2:131~376 57~58
    protein:u:2~528 46,48
    protein:v:34~253 40~44
    8393 5zwm:I
    (3.4Å)
    		 110 GO:0017070 (F) U6 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    GO:0005681 (C) spliceosomal complex    		 URS00001143F5 RF00015 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 54~55,63
    protein:K:22~465 7~8
    protein:L:39~462 16~18,20~21,27~29,32~35,37,39,
    41~42,49,51~52,55~58
    protein:N:4~899 19,40~42,49~51,54~55
    protein:J:108~466 8~12,14,22~23,60
    protein:M:1~126 7,30~32,43~45
    protein:D:447~2163 61~62,71~79,97~99,135~138
    protein:P:12~102 91~92,142,147~148
    protein:Q:1~146 90,138,148,150
    protein:R:17~108 143,149~153
    protein:T:10~93 144~145,151
    protein:U:12~84 143~144,150~151
    protein:V:2~76 145~146
    rna:F:1~112 1~18,57~63
    8394 5zwn:G
    (3.4Å)
    		 22 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    rna:P:1~565 0,2~4,6~10
    protein:R:2~196 2~3,5,7
    protein:Y:4~241 5~6
    8395 5zwn:P
    (3.4Å)
    		 480 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005685 (C) U1 snRNP
    GO:0000243 (C) commitment complex    		 URS000012D749 RF00488 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    rna:G:-9~12 1~8,10
    protein:Q:1~188 34,121,559~561,563~565
    protein:R:2~196 8,10,61,63~65,133,135,137,252,
    254~255,257~258,260,265~268,28
    4~286,297~299,543
    protein:S:3~148 58~63,65~68,141~144,149~150
    protein:T:2~540 74~75,114~116,120,253~254,256,
    268
    protein:U:43~627 76~77
    protein:W:45~293 79,84,86,117~118
    protein:a:3~133 122~123,156~159,171,279~280,30
    2,556~557,561
    protein:b:1~119 19,35~36,548,557~559,562
    protein:c:8~108 549~550,552,558~560,562
    protein:d:5~96 10,114,541~542,554~555
    protein:e:10~92 553,560
    protein:f:12~83 552~553,558~560
    protein:g:2~76 554~555
    protein:Y:4~241 6~8,550~551
    8396 5zwo:B
    (3.9Å)
    		 175 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 32~33,35~36,39~40,79,81,83~86,
    96,99,101,103~105,111~115
    protein:C:102~975 1,45,75,77
    protein:a:8~103 162~163,171
    protein:c:20~110 174,177
    rna:F:1~112 96~99
    8397 5zwo:F
    (3.9Å)
    		 99 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000D7792B RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 1,22,25~27,29~33,42~43,45,48~5
    0
    protein:K:22~465 74~75
    protein:L:39~462 57~61,63
    protein:J:107~466 60~61,71~73,80~87
    protein:E:3~140 30~32,34
    protein:z:3~67 110~111
    rna:B:1~183 27~30
    rna:I:1~154 56~82
    rna:H:3~1169 92~102
    8398 5zwo:G
    (3.9Å)
    		 60 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:1:156~971 504,510,513,520
    rna:H:3~1169 488~500,502~504
    8399 5zwo:H
    (3.9Å)
    		 150 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0000D77944 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    rna:F:1~112 3~13
    rna:G:463~522 32~46
    protein:1:156~971 34,57
    protein:h:6~102 116~117
    protein:j:12~83 113,119
    protein:k:2~76 114~115
    protein:m:1~109 117,119,122
    protein:n:44~108 112,118~119
    protein:v:34~253 40~43
    8400 5zwo:I
    (3.9Å)
    		 110 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000D77922 RF00015 Saccharomyces
    cerevisiae
    S288C
    559292    		 29794219 Assembly1
    protein:A:131~2401 19,55
    protein:L:39~462 17~18,20~21,27,29,32,34~43,55~
    58
    protein:N:4~899 19,41~42,49,54~55
    protein:J:107~466 1,8~14,23
    protein:M:1~126 30~32,43~44
    protein:D:447~2163 71~73,75~77,98~99,136
    protein:P:12~102 92,147
    protein:Q:1~146 138,148
    protein:R:17~108 143,149~150,153
    protein:T:10~93 144,151
    protein:U:12~84 144,151
    rna:F:1~112 1~18,57~63
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.