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FURNA
Download all results in tab-seperated text for 19236 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    19201 9ij3:B
    (2.6Å)

    26 N/A URS0000400A3F N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:221~971 1~11,14~15,17~19
    rna:C:1~25 2~26
    19202 9ij3:C
    (2.6Å)

    25 N/A N/A N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:221~971 8~18,20~25
    rna:B:1~26 1~25
    19203 9ij4:B
    (2.7Å)

    26 N/A URS0000400A3F N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:210~971 1~15,17~19
    rna:C:1~25 2~26
    19204 9ij4:C
    (2.7Å)

    25 N/A N/A N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:210~971 10~18,20~22,24~25
    rna:B:1~26 1~25
    19205 9ij5:B
    (2.8Å)

    26 N/A URS0000400A3F N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:209~971 1~11,14~15,17~19
    rna:C:1~25 2~26
    19206 9ij5:C
    (2.8Å)

    25 N/A N/A N/A Homo
    sapiens

    9606
    39814893 Assembly1
    protein:A:209~971 8,11~18,21~25
    rna:B:1~26 1~25
    19207 9imb:C
    (2.9Å)

    24 N/A N/A N/A Homo
    sapiens

    9606
    39862858
    693

    1022

    s40

    105
    Assembly2
    protein:A:2~469 10~16
    19208 9imb:D
    (2.9Å)

    24 N/A N/A N/A Homo
    sapiens

    9606
    39862858
    693

    1022

    s40

    105
    Assembly1
    protein:B:2~469 10~16
    19209 9is7:A
    (2.87Å)

    123 N/A N/A N/A Paracandidimonas
    lactea

    2895524
    39890981 Assembly1
    rna:B:154~735 1,20,22~28,30,32,34~36,39~41,4
    3,45~47,51~56,58,60~61,66,71~7
    2,97~99,105~107,145~153

    MG:A:201 31,54
    MG:A:202 52,54,153
    K:A:205 29~30
    K:A:206 54,57~58
    19210 9is7:B
    (2.87Å)

    582 N/A N/A N/A Paracandidimonas
    lactea

    2895524
    39890981 Assembly1
    rna:A:1~153 154,158,312~314,356~358,374,42
    7,462,467~472,474~479,525,551~
    552,578,642~644,692,694,705~70
    6,727~733,735

    MG:B:810 506,509
    K:B:826 155,158,641~642
    K:B:827 355~356
    19211 9j0n:P
    (3.4Å)

    12 N/A N/A N/A Homo
    sapiens

    9606
    N/A
    325

    1303
    Assembly1
    protein:A:10~1484 0~1,10~11
    protein:B:16~1174 0,9~10
    dna:T:-72~94 1~11
    MG:A:2003 10~11
    19212 9j0o:P
    (3.3Å)

    16 N/A N/A N/A Homo
    sapiens

    9606
    N/A Assembly1
    protein:A:10~1484 3,12,14
    protein:B:16~1174 1,11~12,14
    dna:T:-72~118 3~13
    MG:A:2003 12~13
    19213 9j0p:P
    (3.3Å)

    16 N/A N/A N/A Homo
    sapiens

    9606
    N/A Assembly1
    protein:A:10~1484 2~3,12~14
    protein:B:16~1174 1,11~12,14
    dna:T:-72~118 3~12
    MG:A:2003 12~13
    19214 9j6p:A
    (2.49Å)

    22 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:B:3~23 3~17,20~23
    A1L3Y:A:101 2,6~8
    A1L3Y:B:101 17,19~20
    19215 9j6p:B
    (2.49Å)

    21 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:A:2~23 3~17,20~23
    A1L3Y:A:101 17,20
    A1L3Y:B:101 6~8
    19216 9j8p:B
    (3.21Å)

    106 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Homo
    sapiens

    9606
    39831302
    1334

    1124

    s59

    M021_0.6
    Assembly1
    protein:A:6~874 19~28,31~33,39,60~63,66~67,75,
    83,92,94~97,104~106
    19217 9jm0:E
    (2.7Å)

    58 N/A URS0002616B7B N/A Escherichia
    coli

    562
    39395169 Assembly1
    protein:A:3~316 14~15,43~56,62~66,68~70,73~78
    protein:J:1~306 73~74
    dna:D:1~85 14,71~80
    rna:F:0~7 10~13
    19218 9jm0:H
    (2.7Å)

    58 N/A URS0002616B7B N/A Escherichia
    coli

    562
    39395169 Assembly1
    protein:C:1~306 73~76
    protein:B:3~316 14,44~56,62~66,68~70,73~78
    protein:T:1~306 59~60
    dna:G:1~85 14,71~80
    rna:I:0~7 10~14
    19219 9jm0:N
    (2.7Å)

    58 N/A URS0002616B7B N/A Escherichia
    coli

    562
    39395169 Assembly1
    protein:K:3~316 14,44~56,62~66,68~70,73~78
    protein:T:1~306 73~74,76
    dna:M:1~85 13~14,71~80
    rna:O:0~7 8,10,13
    19220 9jm0:R
    (2.7Å)

    58 N/A URS0002616B7B N/A Escherichia
    coli

    562
    39395169 Assembly1
    protein:L:1~306 73~76,81
    protein:P:3~316 13~15,44~56,62~70,72~78
    dna:Q:1~85 11~14,71~80
    rna:S:0~7 8~11
    19221 9jxs:A
    (2.93Å)

    59 N/A N/A N/A Escherichia
    coli

    562
    N/A Assembly1
    protein:F:1~372 3~9,11~13
    protein:H:1~375 9~10,12~15,17~20
    protein:I:1~373 15~25
    protein:J:1~374 21~27,29~31
    protein:K:1~373 28~33
    protein:G:1~362 -7,-2~3,5~7
    protein:B:4~378 -7~1
    protein:D:1~264 33~38,42~43,47~52
    dna:M:6~54 1,4~5,8~11,13,16,20,22~23,25~2
    9,31~32
    19222 9kad:A

    14 N/A N/A N/A Homo
    sapiens

    9606
    39807887 Assembly1
    rna:B:15~28 1~12
    19223 9kad:B

    14 N/A N/A N/A Homo
    sapiens

    9606
    39807887 Assembly1
    rna:A:1~14 15~26
    19224 9mj5:P
    (3.5Å)

    11 N/A N/A N/A Homo
    sapiens

    9606
    N/A Assembly1
    protein:S:337~1244 6~11
    dna:T:5~35 1~7,9~11
    19225 9mor:1
    (2.65Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:2:1~1534 1701~1703,1832,1837,1846,1848,
    1912~1913,1916,1919~1920,1947~
    1948,1959~1960

    rna:4:1~120 861~864,915~918,958~959,987,23
    39

    rna:5:0~76 1908,1922~1924,2251~2252,2450~
    2451,2602

    rna:6:1~77 1851~1852,2112,2168,2394,2421~
    2422,2432

    protein:A:1~208 1914~1915,2451~2453,2460~2462,
    2471,2492~2493,2573,2584~2585,
    2602

    protein:B:2~272 690~692,729,764,773~774,778~77
    9,781~782,784,1490~1491,1500~1
    501,1566~1568,1693,1695,1788~1
    792,1795~1801,1804~1805,1812~1
    813,1816~1820,1824~1827,1829,1
    842~1844,1902~1903,1971,2204,2
    591,2597~2600

    protein:C:1~209 1130~1131,1654~1658,1670,1675,
    1993~1994,1997~1998,2025,2048,
    2050~2053,2511~2514,2571~2572,
    2575,2578~2580,2618~2621,2633~
    2636,2642~2643,2678~2683,2723~
    2724,2729~2731,2733,2771,2773,
    2784~2788,2810,2820~2823,2829~
    2831,2836

    protein:D:1~201 38~39,320~324,340,441~444,448~
    449,452,471,587~588,590,599~60
    1,606~607,615~618,658~660,673~
    675,797,801,1205,1244~1245,124
    8,1254~1257,2059~2061,2444~244
    5

    protein:E:2~178 2298~2299,2302~2308,2310~2316
    protein:F:2~176 1111,2528,2530~2531,2653,2657~
    2658,2666~2668,2744~2751,2758~
    2759,2761

    protein:G:1~149 2092~2095,2198~2199,2220~2221
    protein:H:2~131 1046~1047,1055,1083~1084,1106~
    1108

    protein:I:5~139 1058~1061,1063~1064,1070,1077,
    1080~1081,1096,1098

    protein:J:1~142 5~8,528~529,536~538,557,995,10
    05~1009,1012,1131~1133,1138~11
    41,1143,2039~2040,2640~2642,27
    68,2779~2780,2899

    protein:K:1~123 1664~1667,1669,1952,1995~1996,
    2546~2548,2561,2648,2674~2676,
    2683,2726~2727

    protein:L:1~144 195~196,227,244~245,249~251,25
    7~258,567~568,587~588,597~598,
    621,626~628,631~637,660~663,67
    0~671,805~807,810~811,813,826,
    832~833,941~943,1188~1192,1203
    ,1242~1243,1245,1249~1250,2358
    ,2392~2394,2404~2406,2414,2430
    ~2431

    protein:M:1~136 863,868,870~873,905~906,910~91
    1,952~958,1029,2250,2275~2278,
    2459,2467,2469,2482~2485,2494~
    2496

    protein:N:1~119 1275~1276,1278~1279,1287,1294,
    1453~1455,1649~1655,2000,2002,
    2009,2705,2707~2708,2722,2816~
    2817,2819~2820,2838~2840,2873,
    2880~2881

    protein:O:2~117 2293~2296,2334~2335,2376~2379
    protein:P:2~115 2682~2684,2717,2719~2720,2845~
    2849,2867,2875

    protein:Q:2~118 17~19,28~30,445~446,449,532~53
    7,554~555,559~561,563~564,580~
    582,584~585,977,990,992~993,99
    5~997,1009~1012,1151,1153~1154
    ,1156,1198~1199,1216~1219,1227
    ,1248,1251~1252,2018~2019

    protein:R:1~103 565~568,571~572,814,973,992~99
    4,996,1160~1161,1188,1223~1225
    ,1253

    protein:S:1~110 23~25,485~487,492~496,508,517~
    520,747~748,751,1261,1266,1323
    ,1614,2009,2011~2014

    protein:T:1~94 58,63,139,456,1336,1338~1342,1
    599,1601

    protein:U:2~104 84~86,98~100,296~298,301,308,3
    10,327~329,335~337,477~478,480
    ,482~483

    protein:W:10~85 856~858,922~923,2260~2262,2270
    ~2272,2275,2277~2279,2330~2334
    ,2336,2352~2354,2356,2363~2366
    ,2385~2387

    protein:X:2~78 189,200,372~373,380~381,396~40
    0,1364~1365,1808,2079~2080,209
    1,2199~2200,2230~2232

    protein:Y:2~63 61,72~73,76~77,95~96,102
    protein:Z:2~59 850~852,927~929,968~970,988~98
    9,1157~1158,1183~1184

    protein:b:2~57 14~17,516~518,1262~1264,1266,2
    015~2017,2020,2045~2046,2054,2
    615~2616,2623,2814~2815,2831~2
    832,2883~2888

    protein:c:4~55 643,2284~2286,2344~2345,2347~2
    348,2370~2373,2399~2400,2417~2
    420

    protein:d:1~46 53,124~126,210,458~459,464~469
    ,682,684,686~687,770~771,1309,
    1612,1619~1620

    protein:e:2~65 239,242~244,247,250,253,592~59
    3,629~630,651~652,654,666~667,
    835,2348~2349,2359,2361~2362,2
    365,2391~2395,2417,2419~2420,2
    422

    protein:f:1~38 1123~1125,2465~2467,2477~2478,
    2526~2529,2538~2539,2741~2743,
    2755,2757

    protein:t:2~89 714~716
    MG:1:3002 447~448
    MG:1:3005 218~219
    MG:1:3012 733,761
    MG:1:3015 751,1614
    MG:1:3016 783~784,2589
    MG:1:3017 784,2588
    MG:1:3021 829,831
    MG:1:3022 948,962~963
    MG:1:3025 818,1185~1186
    MG:1:3027 2006,2048
    MG:1:3028 1271~1272,1647~1648
    MG:1:3033 1394,1604
    MG:1:3034 1603~1604
    MG:1:3039 1670~1671
    MG:1:3044 2024~2025
    MG:1:3046 2061,2502
    MG:1:3049 2248~2249
    MG:1:3050 2267~2268
    MG:1:3054 2540~2541
    MG:1:3056 2711,2714
    MG:1:3057 14~15
    MG:1:3058 300,338
    MG:1:3059 370,422~423
    MG:1:3061 571~572
    MG:1:3063 818,1185~1187
    MG:1:3065 976~977
    MG:1:3069 1123~1124
    MG:1:3071 1359~1360
    MG:1:3073 1439~1440
    MG:1:3077 529,2022~2023
    MG:1:3080 2448,2498
    MG:1:3081 570,2030,2448,2499
    MG:1:3082 1780,1782~1783
    MG:1:3083 730~731,761
    MG:1:3084 740,1783~1784
    MG:1:3085 2582~2583
    MG:1:3086 2507,2573~2574
    MG:1:3087 1342,1602
    MG:1:3088 909~910
    MG:1:3091 1265,2047
    MG:1:3092 195,197
    MG:1:3095 568~569
    MG:1:3096 1008~1009
    MG:1:3102 1939,1966~1967
    MG:1:3103 1470~1471
    MG:1:3104 1345~1346
    MG:1:3106 2451~2452,2454
    MG:1:3113 2844,2871
    MG:1:3114 678,776,2072
    MG:1:3115 1189~1190
    MG:1:3118 990,1157~1158
    MG:1:3123 2767~2768
    MG:1:3125 2569~2571
    MG:1:3128 2517,2542
    MG:1:3130 379~380
    MG:1:3133 2053,2576
    MG:1:3135 12~13
    MG:1:3137 1669,1671,2550
    MG:1:3139 297~298
    MG:1:3145 2542~2544
    MG:1:3146 826~827,2427
    MG:1:3148 1314~1315,1332
    MG:1:3149 621~622
    MG:1:3152 1131~1132
    MG:1:3160 446,1200
    MG:1:3163 2835,2878~2879
    MG:1:3164 2737~2738
    MG:1:3169 2030,2447
    MG:1:3171 1789~1790,1828
    MG:1:3174 1249~1250
    MG:1:3175 2646~2647
    MG:1:3177 810,1253
    MG:1:3179 1236~1237
    MG:1:3186 639,648~649
    MG:1:3187 593~594,664
    MG:1:3195 576,2503
    MG:1:3198 2753~2754
    MG:1:3199 2747~2748,2752~2753
    MG:1:3205 946,971
    MG:1:3206 375,408
    MG:1:3209 1269,2005
    MG:1:3210 2681~2682
    MG:1:3211 2685~2686
    MG:1:3213 2688,2719
    MG:1:3220 952~953,955
    MG:1:3222 827~828
    MG:1:3226 2482~2483
    MG:1:3227 2459~2460
    MG:1:3229 376,398
    MG:1:3232 1298,1639
    MG:1:3235 2384~2385
    MG:1:3236 2325~2326
    MG:1:3237 2290,2336,2385
    MG:1:3240 827,2426
    MG:1:3245 535~536
    MG:1:3247 861,953
    MG:1:3248 911~913
    MG:1:3251 1378~1379
    MG:1:3255 787,790
    MG:1:3256 776,793~794
    MG:1:3263 2032,2454,2499
    MG:1:3264 2061,2447,2501
    MG:1:3271 2820~2821
    MG:1:3275 464~465
    MG:1:3277 2570,2573~2574
    MG:1:3278 2490~2491
    MG:1:3281 16,524
    19226 9mor:2
    (2.65Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000081169C RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 702,784,899,1407~1408,1418,142
    9,1474,1483~1484,1492,1494~149
    5,1517

    rna:5:0~76 790,966,1229~1230,1338~1341,14
    00

    rna:6:1~77 693~695,789,1340
    rna:7:13~25 693,788~789,926,1196,1397,1400
    ~1402,1498

    protein:A:1~208 518~519,530~531,955,1054,1493
    protein:K:1~123 339,1422
    protein:P:2~115 346,1432,1442,1462~1463
    protein:g:3~227 828~831,859,1072~1076,1097~109
    8,1100~1105,1158

    protein:h:2~209 532,1055~1058,1060~1062,1065,1
    106~1108,1111~1113,1188~1194,1
    196,1206

    protein:i:2~206 4,8,28,401,403~405,409,413,426
    ~430,437~439,499,508~512,542~5
    46,619~620

    protein:j:10~165 6~10,15~16,18~19,560,566,864,9
    21~922,1070~1071,1074,1078,108
    0~1081,1398

    protein:k:1~104 671,673,710,736~738
    protein:l:2~152 693~694,932~933,935,941,1239~1
    240,1289~1291,1297~1298,1346,1
    350,1373~1378,1380

    protein:m:2~130 586~587,590,597~600,640,642,65
    3,824~826,875,877~878

    protein:n:4~130 967,970,1117~1119,1130,1147~11
    48,1178~1180,1231~1233,1248~12
    49,1342~1350,1367~1369,1371~13
    73

    protein:o:5~103 963~964,972~973,975,1059~1061,
    1123~1124,1126,1150~1152,1198~
    1199,1253~1254,1279~1280,1367~
    1368

    protein:p:13~129 675~676,683~684,686~692,695,70
    6~707,716,718,795~797,1506,152
    2~1523

    protein:q:2~124 33~38,362~363,501~503,520~523,
    529,538~539,551~553,556,562,56
    4,880~881,913

    protein:r:2~117 947~949,952~953,1225~1229,1267
    ,1295,1302,1307~1310,1321,1328
    ~1330

    protein:s:2~101 973~974,976~977,979~981,983,99
    4~995,1046,1048~1050,1058~1060
    ,1115,1186~1188,1202~1203,1217
    ,1257,1316~1318,1359~1360,1368

    protein:t:2~89 579,656~658,667~668,728,739~74
    1,743,750~751,753~755

    protein:u:1~82 42~44,110~111,134~137,226~230,
    310~311,374~378,392~393,450~45
    2,473,608,624~626

    protein:v:4~83 127,130,234,237,253~255,264~26
    5,275~277,280,564,597,635

    protein:w:10~75 664,672~675,719~721,736,835,84
    5

    protein:x:2~84 957~958,1014,1220~1223,1225~12
    27,1312~1314,1316,1318~1321

    protein:y:2~87 61,101~104,107~108,132,175~178
    ,185~186,192,194~196,224,259~2
    63,322~323,331~333,1436~1439,1
    457~1459

    protein:z:2~71 718,723,856,1088,1099,1167,152
    6~1527,1530,1533

    MG:2:1601 360~361
    MG:2:1602 580~581
    MG:2:1603 782,794
    MG:2:1609 1177~1178
    MG:2:1613 924~925
    MG:2:1615 22,561
    MG:2:1618 1242~1243
    MG:2:1619 1300~1301
    MG:2:1620 327,329~330
    MG:2:1623 193~194
    MG:2:1627 449~450
    MG:2:1629 448~449
    MG:2:1634 372,387
    MG:2:1637 1086~1087
    MG:2:1640 1328~1329
    MG:2:1643 597~598
    MG:2:1661 530~531
    MG:2:1663 508,510
    MG:2:1664 1499~1500,1505
    MG:2:1666 1500,1505,1508
    MG:2:1668 117,289
    MG:2:1669 644~645
    MG:2:1673 607,609
    MG:2:1674 1054,1197~1198
    MG:2:1675 174~175
    MG:2:1679 572~574
    MG:2:1680 13~14
    MG:2:1681 64,101
    MG:2:1689 59,352
    MG:2:1695 258~259
    MG:2:1699 858,869
    MG:2:1702 1300,1334
    MG:2:1703 976,1359
    MG:2:1704 515~516,533
    MG:2:1706 951~952
    MG:2:1708 51~52
    MG:2:1710 1197~1198
    MG:2:1711 58~59,386~387
    MG:2:1712 979~980,1222
    MG:2:1713 105,323~324
    MG:2:1715 1303,1305
    MG:2:1719 106,324
    MG:2:1720 936~939
    MG:2:1723 984,1221
    19227 9mor:4
    (2.65Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 41,78,84,89,97~101
    protein:E:2~178 42~45,56~57
    protein:M:1~136 79,91
    protein:O:2~117 6~9,27~29,37~38,48~52,116
    protein:V:1~94 73~79,92~94,104~105
    protein:Z:2~59 82~83
    protein:a:1~66 40,42~44
    MG:4:202 21~22
    MG:4:203 66,108
    MG:4:204 57~58
    MG:4:206 76,100~101
    MG:4:208 100~101
    19228 9mor:5
    (2.65Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 11~12,24~25,74~76
    rna:2:1~1534 29~32,34~35,38~42
    rna:7:13~25 34~37
    protein:E:2~178 56~57
    protein:n:4~130 32~35
    MG:5:101 11~12
    MG:5:103 37~38
    19229 9mor:6
    (2.65Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 20,57,71~72,76~77
    rna:2:1~1534 36~37,39
    protein:l:2~152 32~34,36,41~43
    19230 9mor:7
    (2.65Å)

    13 N/A N/A N/A Escherichia
    coli

    562
    39829893 Assembly1
    rna:2:1~1534 13~19,22~23
    rna:5:0~76 16~18
    protein:h:2~209 23~25
    19231 9mq4:1
    (2.78Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:2:1~1534 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961

    rna:4:1~120 861~864,915,917~919,958,2339~2
    340

    rna:5:0~76 1907~1909,1922~1924,2063,2251~
    2253,2255,2450~2451,2602

    rna:6:1~77 1851~1852,2394,2421~2422,2432
    protein:A:1~229 1913~1916,2460,2492~2493,2506~
    2508,2553~2557,2584~2585,2602~
    2604

    protein:B:2~272 690~693,705,727~729,764,773~77
    4,778~782,784,1353~1354,1370,1
    490~1491,1500~1501,1565~1569,1
    693~1695,1774,1788~1792,1795~1
    801,1803,1805~1806,1812~1814,1
    816~1821,1823~1827,1829~1830,1
    841~1845,1901~1903,1971~1972,1
    977,2073,2204,2222~2224,2227,2
    590~2591,2595~2600

    protein:C:1~209 574,744,1130,1654~1658,1670,16
    73,1675,1993~1994,1996~1998,20
    24,2032,2048,2050~2053,2511~25
    14,2571~2572,2574~2575,2578~25
    80,2618~2621,2633,2635~2637,26
    77~2683,2723~2724,2729~2730,27
    33,2771~2773,2784~2787,2810~28
    11,2820~2823,2830~2831

    protein:D:1~201 37~38,320~323,441~444,448~449,
    451~452,468~469,471,586~588,59
    9~600,605~607,615~617,619,658~
    660,671~675,796~797,801,1205,1
    244~1245,1248,1255~1258,2059~2
    061,2444~2445

    protein:E:2~178 2298~2299,2302~2308,2310~2315
    protein:F:2~176 1113,2529~2531,2653,2657~2659,
    2666~2668,2744~2749,2751,2757~
    2759,2761

    protein:G:1~149 2092~2096,2198~2199,2220~2221
    protein:H:2~131 1046,1054~1055,1082~1084,1106~
    1108

    protein:I:5~139 1059~1064,1076~1082,1088,1095~
    1099

    protein:J:1~142 6~7,528~529,536~539,557~558,99
    5,1005~1007,1009,1012,1022,113
    0~1132,1138~1141,1143,2514,264
    0~2642,2780,2898

    protein:K:1~123 1665~1667,1669,1951~1952,1995~
    1996,2547~2548,2561~2563,2565~
    2566,2674~2676,2683~2684,2726~
    2727

    protein:L:1~144 195~196,249,251,566~568,587,59
    7~598,621,626~627,631~633,635~
    637,661~663,666,670~672,805~80
    7,810~814,825~826,831~833,942,
    1189~1190,1193,1202~1203,1242~
    1243,1245,1249~1250,2358~2360,
    2392~2395,2405~2406,2414~2416,
    2428

    protein:M:1~136 864,868~871,873~874,905~908,91
    0~912,954~958,2250~2251,2275~2
    278,2459,2467,2469,2483~2485,2
    494~2496

    protein:N:1~119 1275~1279,1287,1294~1295,1453~
    1455,1649~1654,2000,2002~2003,
    2009,2690,2701,2705~2710,2722,
    2817~2818,2820~2822,2838~2840,
    2873,2880~2882

    protein:O:2~117 2293~2295,2334~2335,2376~2380
    protein:P:2~115 1753~1755,2682~2684,2717~2720,
    2845,2847~2849,2867,2875~2876

    protein:Q:2~118 17~18,28~30,445~447,449,532~53
    6,559~561,563~564,580~585,977,
    992~998,1010~1012,1151~1154,11
    56,1198~1199,1216~1217,1248~12
    49,1251~1252,2019~2020

    protein:R:1~103 563~566,568,571~572,814~815,97
    3~975,992~994,996,1160~1163,11
    87~1188,1222~1225

    protein:S:1~110 24~25,485~489,491,493~496,508,
    517~519,747~748,751,1266,1322~
    1323,1325,1614~1615,2009~2014

    protein:T:1~94 58,63~65,138~139,141,143,1334,
    1337~1342,1392,1394,1398,1599~
    1602

    protein:U:2~104 83~85,99~100,296~301,309,327~3
    29,335,337,480~481,483~484,498
    ~499

    protein:V:1~94 1040,1119
    protein:W:10~85 855~858,922~923,2261~2262,2270
    ~2271,2277~2279,2330~2333,2336
    ,2352~2357,2364~2366,2384~2387

    protein:X:2~78 188~189,200~201,205,371~372,37
    9~381,396~400,1364~1365,1808,2
    079~2080,2090~2092,2199~2200,2
    218,2228,2230~2232,2432

    protein:Y:2~63 61,72~78,95~96,102
    protein:Z:2~59 850~851,920,927~931,968~970,98
    8~989,1183~1184

    protein:b:2~57 14~17,517,1262~1264,1266,2015~
    2017,2019~2020,2022,2045~2046,
    2055~2056,2577,2615,2623~2624,
    2814~2816,2883~2888

    protein:c:4~55 643,2284~2287,2344~2348,2370~2
    372,2420

    protein:d:1~46 53~54,117~118,124~126,210,458~
    460,464~469,682~684,686~687,75
    2~753,770~771,789,1309,1367,13
    77,1612~1613,1619

    protein:e:2~65 241~246,250,252~254,591~593,62
    9~631,650~651,667,937,2348~235
    1,2359,2361~2363,2365,2390~239
    4,2418~2420

    protein:f:1~38 1031~1032,1124~1125,2465~2467,
    2477~2478,2526~2529,2539,2742~
    2743,2755~2757

    protein:r:2~117 888~889
    protein:t:2~89 714~716
    MG:1:3008 450,453
    MG:1:3014 733,761
    MG:1:3017 751,1614
    MG:1:3018 783~784,2589
    MG:1:3019 784,2588
    MG:1:3024 948,962~963
    MG:1:3025 999,1153
    MG:1:3029 1268,2006
    MG:1:3030 1271~1272,1647~1648
    MG:1:3034 1358,1371
    MG:1:3035 1394,1604
    MG:1:3036 1395,1603~1604
    MG:1:3039 1664,1992
    MG:1:3041 1670~1671
    MG:1:3047 2056~2057
    MG:1:3048 2061,2502
    MG:1:3051 2248~2249
    MG:1:3052 2268~2269
    MG:1:3054 2303~2304
    MG:1:3056 2518,2541
    MG:1:3058 2711,2714
    MG:1:3059 14~15
    MG:1:3061 370,422
    MG:1:3065 818,1187
    MG:1:3069 990~991,1186
    MG:1:3073 1359~1360
    MG:1:3075 1439~1440
    MG:1:3083 2447~2448,2498~2499
    MG:1:3084 570,2030,2448,2499
    MG:1:3085 1780,1782~1783
    MG:1:3086 730~731,761
    MG:1:3087 740,1783~1784
    MG:1:3088 2582~2583
    MG:1:3089 2573~2575
    MG:1:3090 1342,1602
    MG:1:3092 192,2243
    MG:1:3094 1265,2615
    MG:1:3095 195,197~198
    MG:1:3097 510~512
    MG:1:3099 1006,1009~1010
    MG:1:3107 1966~1967
    MG:1:3108 1471,1519~1520
    MG:1:3109 1345~1346
    MG:1:3110 1838,1841~1842,1898
    MG:1:3114 88~89
    MG:1:3117 1664~1665
    MG:1:3119 678,776,793,2072
    MG:1:3120 1189~1190
    MG:1:3128 2766~2767
    MG:1:3130 2571,2574
    MG:1:3138 2576~2577
    MG:1:3141 2508,2580
    MG:1:3142 1669~1671,2550
    MG:1:3145 945~946
    MG:1:3150 2543~2544
    MG:1:3151 826,2427~2429
    MG:1:3153 1314~1315,1332
    MG:1:3175 570,2030,2448
    MG:1:3177 1789~1790,1828
    MG:1:3181 2646~2647
    MG:1:3183 810,1253
    MG:1:3192 638~639,648~649
    MG:1:3193 594,662~663
    MG:1:3195 739,1778
    MG:1:3197 839,939~940
    MG:1:3200 979~980,982
    MG:1:3201 576,2503
    MG:1:3205 2748,2754
    MG:1:3212 375,393
    MG:1:3215 1269,2005
    MG:1:3216 2681~2682
    MG:1:3217 2684~2685
    MG:1:3227 2525~2526,2537~2538
    MG:1:3228 827,2430
    MG:1:3232 2475,2477,2529
    MG:1:3239 1298,1639
    MG:1:3242 2289,2385
    MG:1:3247 827,2429
    MG:1:3248 411,2407
    MG:1:3251 526~527
    MG:1:3258 1378~1380
    MG:1:3262 787,790
    MG:1:3263 775~776,793~794
    MG:1:3264 2846~2847
    MG:1:3271 2061,2447,2501
    MG:1:3273 577,809
    MG:1:3277 2821~2822
    MG:1:3278 1838~1839
    MG:1:3280 2053,2577
    MG:1:3291 328,332
    19232 9mq4:2
    (2.78Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2~1496,1517

    rna:5:0~76 790,966,1229,1338~1340,1400
    rna:7:13~18 693,789,926,1400~1403,1498,150
    5

    protein:A:1~229 12~16,506,519,526~527,530~531,
    914,1397,1410,1491

    protein:K:1~123 339,1422~1423
    protein:P:2~115 345~346,1432~1433,1441~1442,14
    63~1464

    protein:a:1~66 1311~1312
    protein:g:3~227 829~831,1073~1076,1098,1100~11
    03,1158

    protein:h:2~209 421,532,1055~1060,1106~1109,11
    11~1112,1189~1193,1196,1205~12
    06

    protein:i:2~206 5,8,400~410,413,426~430,437~43
    9,509,511~512,541~547,613,619~
    620

    protein:j:10~165 5~10,15~16,18~19,560,864,921~9
    23,1070,1073,1078~1082,1194,13
    96~1398

    protein:k:1~104 662,671,673~674,710,736~739
    protein:l:2~152 693~694,932~933,935,938~939,10
    92,1240~1241,1291,1297~1298,13
    46,1350~1351,1372~1378,1380

    protein:m:2~130 586~591,597~600,640~643,653,75
    6,823~827,875~879

    protein:n:4~130 942,966~968,1116~1119,1130,114
    7~1149,1178~1180,1186~1187,123
    2~1233,1249~1250,1342~1350,136
    7~1373

    protein:o:5~103 963,972~973,975,1058~1061,1115
    ,1123~1126,1150~1153,1198,1254
    ~1255,1279~1280,1366~1368

    protein:p:13~129 674~677,683~695,704~708,716~71
    8,777~780,795~797,1506,1522~15
    23,1525

    protein:q:2~124 33~37,362~363,500~503,518~523,
    526~529,537~539,551~554,561~56
    4,567,585,879~881,909~910,1492
    ~1493

    protein:r:2~117 947~952,1225~1230,1295~1296,13
    02,1306~1310,1321,1328~1330

    protein:s:2~101 973~974,976~977,979~983,995,10
    48~1049,1060,1114~1115,1186~11
    87,1202~1203,1216~1220,1257,13
    16~1317,1358~1360

    protein:t:2~89 579,581,656~658,667~668,728,73
    0,739~741,750~754,764,809

    protein:u:1~82 43~44,110,134~137,227~230,309~
    310,374~377,390~393,450~452,48
    3,608,617~618,624~627

    protein:v:4~83 127~128,130,235~237,253~255,26
    4~265,267,275~278,280,564,585,
    597,636

    protein:w:10~75 663~664,672~675,718~721,734~73
    6,835~836

    protein:x:2~84 955,957~958,986,1014~1015,1219
    ~1223,1225~1227,1312~1314,1316
    ~1322

    protein:y:2~87 60~61,101~102,104,106~108,132,
    175~177,185~187,192~195,224,25
    9~263,322~323,331~333,351,1437
    ~1439,1457~1459

    protein:z:2~71 718,723,1098~1100,1167,1526~15
    27,1530

    MG:2:1608 109,331
    MG:2:1613 1054,1198
    MG:2:1619 862~863
    MG:2:1622 1500,1508
    MG:2:1623 450,452
    MG:2:1626 1507~1508
    MG:2:1627 1499~1500,1505
    MG:2:1631 759~760
    MG:2:1632 1094~1095,1108
    MG:2:1633 979~981,1222
    MG:2:1636 59,386~387
    MG:2:1641 372,375~376
    MG:2:1646 530~531
    MG:2:1648 509~510
    MG:2:1653 944~945
    MG:2:1660 180,194~195
    MG:2:1663 596~598
    MG:2:1664 107,326
    MG:2:1666 516,533
    MG:2:1668 782,794,1521
    MG:2:1669 1175~1177
    MG:2:1671 1501,1508
    MG:2:1678 1068,1094
    MG:2:1679 576,578
    MG:2:1680 1053~1054,1197
    MG:2:1687 572,574
    MG:2:1694 299,558
    MG:2:1701 116~117,289
    MG:2:1705 858,869
    MG:2:1707 1303~1304
    MG:2:1708 964,1199
    MG:2:1711 976,1358~1359
    MG:2:1715 174~175
    MG:2:1720 100~101
    19233 9mq4:4
    (2.78Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 41,78~81,89~90,96~97,99~100
    protein:E:2~178 41~43,45,55,57
    protein:M:1~136 80,90~91
    protein:O:2~117 6~9,27~29,37~38,46~52,112~114,
    117

    protein:V:1~94 73~80,93~95,98,103~104
    protein:Z:2~59 82~83
    protein:a:1~66 40,42~44
    MG:4:202 57~58
    MG:4:203 15~16,69
    19234 9mq4:5
    (2.78Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 10~12,24~25,74~76
    rna:2:1~1534 29~32,34,38,40~41
    rna:7:13~18 34~37
    protein:A:1~229 73,76
    protein:E:2~178 19,56~57
    protein:n:4~130 32~35
    MG:5:103 19,60
    MG:5:104 10~11
    19235 9mq4:6
    (2.78Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39829893 Assembly1
    rna:1:1~2903 72,77
    protein:l:2~152 33~36,42
    19236 9mu9:R
    (7.8Å)

    10 N/A N/A N/A Drosophila
    melanogaster

    7227
    N/A Assembly1
    dna:T:-72~101 37~46
    protein:A:7~1476 37,46
    protein:B:13~1176 38,42~46
    << < 183 184 185 186 187 188 189 190 191 192 193 > >>
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
  • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218